Clone Sequence Records
BS06137.3prime Sequence
366 bp (365 high quality bases) assembled on 2005-12-03
> BS06137.3prime
ATGGTCTAGAAAGCTTTTAGAACTTGAGTTTGCTTAGTGTGTCGGACACT
TTCTGGGCATCGACCCCCTTCTTCTTGTAGCTCTTGATGGGTGCCACAGG
TGCCTTTGGCTTCTTCACCACCAGATCCTTGTGTAGAGTCTTCAGGCTGG
CGTCCAATTTCTCCTGCTTAGCTTTAACAGATTCCTTGATCTGCTTGAGC
TTGCCCTGCACTTCCTTGGGCTTCTTGCCCTTGCCCTTGTTACCGTCGCC
CACTTTGAATACGTTCTTGGCCTTTTTGGACTTGTTCAGAGCCGACTTTG
GCTTGGCGGCCCCAGGAGTAACCTTCTTGTTGTTTGCCTTGTTGCGACCC
ATGTCGACTGATAACT
BS06137.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32278-PA | 336 | CG32278-RA | 1..336 | 352..17 | 1680 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:31:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32278-RA | 845 | CG32278-RA | 80..415 | 352..17 | 1680 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:31:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3171160..3171337 | 194..17 | 890 | 100 | Minus |
3L | 28110227 | 3L | 3170945..3171106 | 352..191 | 810 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:31:18 has no hits.
BS06137.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:06 Download gff for
BS06137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-PA | 1..336 | 17..352 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:06 Download gff for
BS06137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-PA | 1..336 | 17..352 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:01:07 Download gff for
BS06137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-RA | 70..417 | 13..362 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:44:49 Download gff for
BS06137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-RA | 70..417 | 13..362 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 23:44:49 Download gff for
BS06137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3171164..3171339 | 13..190 | 98 | | Minus |
3L | 3170945..3171106 | 191..352 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:01:07 Download gff for
BS06137.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3171164..3171339 | 13..190 | 98 | | Minus |
arm_3L | 3170945..3171106 | 191..352 | 100 | -> | Minus |
BS06137.5prime Sequence
366 bp (365 high quality bases) assembled on 2005-12-03
> BS06137.5prime
GAAGTTATCAGTCGACATGGGTCGCAACAAGGCAAACAACAAGAAGGTTA
CTCCTGGGGCCGCCAAGCCAAAGTCGGCTCTGAACAAGTCCAAAAAGGCC
AAGAACGTATTCAAAGTGGGCGACGGTAACAAGGGCAAGGGCAAGAAGCC
CAAGGAAGTGCAGGGCAAGCTCAAGCAGATCAAGGAATCTGTTAAAGCTA
AGCAGGAGAAATTGGACGCCAGCCTGAAGACTCTACACAAGGATCTGGTG
GTGAAGAAGCCAAAGGCACCTGTGGCACCCATCAAGAGCTACAAGAAGAA
GGGGGTCGATGCCCAGAAAGTGTCCGACACACTAAGCAAACTCAAGTTCT
AAAAGCTTTCTAGACC
BS06137.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32278-PA | 336 | CG32278-RA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:51:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32278-RA | 845 | CG32278-RA | 80..415 | 17..352 | 1680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:51:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3171160..3171337 | 175..352 | 890 | 100 | Plus |
3L | 28110227 | 3L | 3170945..3171106 | 17..178 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:51:43 has no hits.
BS06137.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:07 Download gff for
BS06137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-PA | 1..336 | 17..352 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:07 Download gff for
BS06137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-PA | 1..336 | 17..352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-14 14:58:42 Download gff for
BS06137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-RA | 70..417 | 7..356 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:07:02 Download gff for
BS06137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-RA | 70..417 | 7..356 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:02 Download gff for
BS06137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3170945..3171106 | 17..178 | 100 | -> | Plus |
3L | 3171164..3171339 | 179..356 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-14 14:58:42 Download gff for
BS06137.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3170945..3171106 | 17..178 | 100 | -> | Plus |
arm_3L | 3171164..3171339 | 179..356 | 98 | | Plus |
BS06137.complete Sequence
368 bp (368 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635368
> BS06137.complete
GAAGTTATCAGTCGACATGGGTCGCAACAAGGCAAACAACAAGAAGGTTA
CTCCTGGGGCCGCCAAGCCAAAGTCGGCTCTGAACAAGTCCAAAAAGGCC
AAGAACGTATTCAAAGTGGGCGACGGTAACAAGGGCAAGGGCAAGAAGCC
CAAGGAAGTGCAGGGCAAGCTCAAGCAGATCAAGGAATCTGTTAAAGCTA
AGCAGGAGAAATTGGACGCCAGCCTGAAGACTCTACACAAGGATCTGGTG
GTGAAGAAGCCAAAGGCACCTGTGGCACCCATCAAGAGCTACAAGAAGAA
GGGGGTCGATGCCCAGAAAGTGTCCGACACACTAAGCAAACTCAAGTTCT
AAAAGCTTTCTAGACCAT
BS06137.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:44:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32278-RA | 336 | CG32278-PA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:44:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32278-RA | 845 | CG32278-RA | 80..415 | 17..352 | 1680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:44:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3171160..3171337 | 175..352 | 890 | 100 | Plus |
3L | 28110227 | 3L | 3170945..3171106 | 17..178 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:44:51 has no hits.
BS06137.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:20:19 Download gff for
BS06137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-RA | 1..336 | 17..352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:51:59 Download gff for
BS06137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-RA | 69..416 | 7..356 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:36:58 Download gff for
BS06137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-RA | 80..413 | 17..350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:20:19 Download gff for
BS06137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-RA | 69..416 | 7..356 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:07:22 Download gff for
BS06137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32278-RA | 80..413 | 17..350 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:07:22 Download gff for
BS06137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3170945..3171106 | 17..178 | 100 | -> | Plus |
3L | 3171164..3171335 | 179..350 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:36:58 Download gff for
BS06137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3170945..3171106 | 17..178 | 100 | -> | Plus |
arm_3L | 3171164..3171335 | 179..350 | 100 | | Plus |
BS06137.pep Sequence
Translation from 16 to 351
> BS06137.pep
MGRNKANNKKVTPGAAKPKSALNKSKKAKNVFKVGDGNKGKGKKPKEVQG
KLKQIKESVKAKQEKLDASLKTLHKDLVVKKPKAPVAPIKSYKKKGVDAQ
KVSDTLSKLKF*
BS06137.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:18:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32278-PA | 111 | CG32278-PA | 1..111 | 1..111 | 556 | 100 | Plus |