Clone BS06145 Report

Search the DGRC for BS06145

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:61
Well:45
Vector:pDNR-Dual
Associated Gene/Transcriptobsolete transcript model
Protein status:BS06145.pep: validated full length
Sequenced Size:16

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8248-RA 2009-01-21 est gleaning

Clone Sequence Records

BS06145.3prime Sequence

549 bp (548 high quality bases) assembled on 2005-12-03

> BS06145.3prime
ATGGTCTAGAAAGCTTCTAAAACTTTGGCAAAGATTTTGGTGAAATACCT
TTTGATGACCGGCGATCCTGCTTGTGGATCTGGGCATAAGATTGCAGCGA
GCACCGGCGCAGTCGCTTGTCCCCTTTGTTCTGCGACTTGTAGTGCTGGT
TGATGTCCGAGGCGGCCTTCAGAAGCAGATAGACAAACACAAGGGCGAAC
AGGTAAATAATGGGCTCCGCTGTGTTACTCTTCTTGCCAACTTCCTTCTT
CTTGTGCCCCTCCGGGGACTTTATCAAACGACGAGGTTGCTTGCTGACCC
CATTTCCAGTGCCGTTTTTGGTTCTCTTCGTGGGCCTGCCTTGGGATCTT
CTTGAAACTGCCTGATTCCGATTGGATTCCTTTCCGAAAACGTCCAACCT
CTGGCACGATGCATCTGGAGCGGCGACATCCAATTCGGCGTCGGCCATGG
CTTCCGGCTGGGCATGGTGCAGGTCGAAGGCAGCCACGCCCGGCTTAAAA
TAGTGCCTGTAGTTGCGCTGCATCCCGGCTACCATGTCGACTGATAACT

BS06145.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG8248-PA 519 CG8248-RA 1..519 535..17 2595 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG8248-RA 1372 CG8248-RA 443..962 536..17 2600 100 Minus
CG8248-RB 1369 CG8248-RB 443..959 536..17 2545 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:42:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8919524..8919926 134..536 2015 100 Plus
2R 25286936 2R 8919350..8919467 17..134 590 100 Plus
Blast to na_te.dros performed on 2015-02-12 04:42:35 has no hits.

BS06145.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:19 Download gff for BS06145.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8248-PA 1..519 17..535 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:23 Download gff for BS06145.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8248-PA 1..519 17..535 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:07:23 Download gff for BS06145.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8248-RA 440..964 12..540 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:59:30 Download gff for BS06145.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8248-RA 440..964 12..540 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:59:30 Download gff for BS06145.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8919344..8919466 12..133 97 <- Plus
2R 8919524..8919929 134..540 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:07:23 Download gff for BS06145.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4806849..4806971 12..133 97 <- Plus
arm_2R 4807029..4807434 134..540 99   Plus

BS06145.5prime Sequence

549 bp (548 high quality bases) assembled on 2005-12-03

> BS06145.5prime
GAAGTTATCAGTCGACATGGTAGCCGGGATGCAGCGCAACTACAGGCACT
ATTTTAAGCCGGGCGTGGCTGCCTTCGACCTGCACCATGCCCAGCCGGAA
GCCATGGCCGACGCCGAATTGGATGTCGCCGCTCCAGATGCATCGTGCCA
GAGGTTGGACGTTTTCGGAAAGGAATCCAATCGGAATCAGGCAGTTTCAA
GAAGATCCCAAGGCAGGCCCACGAAGAGAACCAAAAACGGCACTGGAAAT
GGGGTCAGCAAGCAACCTCGTCGTTTGATAAAGTCCCCGGAGGGGCACAA
GAAGAAGGAAGTTGGCAAGAAGAGTAACACAGCGGAGCCCATTATTTACC
TGTTCGCCCTTGTGTTTGTCTATCTGCTTCTGAAGGCCGCCTCGGACATC
AACCAGCACTACAAGTCGCAGAACAAAGGGGACAAGCGACTGCGCCGGTG
CTCGCTGCAATCTTATGCCCAGATCCACAAGCAGGATCGCCGGTCATCAA
AAGGTATTTCACCAAAATCTTTGCCAAAGTTTTAGAAGCTTTCTAGACC

BS06145.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG8248-PA 519 CG8248-RA 1..519 17..535 2595 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG8248-RA 1372 CG8248-RA 443..962 16..535 2600 100 Plus
CG8248-RB 1369 CG8248-RB 443..959 16..535 2545 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8919524..8919926 418..16 2015 100 Minus
2R 25286936 2R 8919350..8919467 535..418 590 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:57:47 has no hits.

BS06145.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:20 Download gff for BS06145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8248-PA 1..519 17..535 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:25 Download gff for BS06145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8248-PA 1..519 17..535 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:45:55 Download gff for BS06145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8248-RA 440..964 12..540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:57:19 Download gff for BS06145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8248-RA 440..964 12..540 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:57:19 Download gff for BS06145.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8919344..8919466 419..540 97 <- Minus
2R 8919524..8919929 12..418 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:45:55 Download gff for BS06145.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4806849..4806971 419..540 97 <- Minus
arm_2R 4807029..4807434 12..418 99   Minus

BS06145.complete Sequence

551 bp (551 high quality bases) assembled on 2005-12-09

> BS06145.complete
GAAGTTATCAGTCGACATGGTAGCCGGGATGCAGCGCAACTACAGGCACT
ATTTTAAGCCGGGCGTGGCTGCCTTCGACCTGCACCATGCCCAGCCGGAA
GCCATGGCCGACGCCGAATTGGATGTCGCCGCTCCAGATGCATCGTGCCA
GAGGTTGGACGTTTTCGGAAAGGAATCCAATCGGAATCAGGCAGTTTCAA
GAAGATCCCAAGGCAGGCCCACGAAGAGAACCAAAAACGGCACTGGAAAT
GGGGTCAGCAAGCAACCTCGTCGTTTGATAAAGTCCCCGGAGGGGCACAA
GAAGAAGGAAGTTGGCAAGAAGAGTAACACAGCGGAGCCCATTATTTACC
TGTTCGCCCTTGTGTTTGTCTATCTGCTTCTGAAGGCCGCCTCGGACATC
AACCAGCACTACAAGTCGCAGAACAAAGGGGACAAGCGACTGCGCCGGTG
CTCGCTGCAATCTTATGCCCAGATCCACAAGCAGGATCGCCGGTCATCAA
AAGGTATTTCACCAAAATCTTTGCCAAAGTTTTAGAAGCTTTCTAGACCA
T

BS06145.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG8248-RA 684 CG8248-PA 165..684 16..535 2600 100 Plus
CG8248-RB 681 CG8248-PB 165..681 16..535 2520 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:25:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG8248-RA 1372 CG8248-RA 443..962 16..535 2600 100 Plus
CG8248-RB 1369 CG8248-RB 443..959 16..535 2520 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8919524..8919926 418..16 2015 100 Minus
2R 25286936 2R 8919350..8919467 535..418 590 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:25:48 has no hits.

BS06145.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:17:53 Download gff for BS06145.complete
Subject Subject Range Query Range Percent Splice Strand
CG8248-RA 162..684 12..535 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:58:43 Download gff for BS06145.complete
Subject Subject Range Query Range Percent Splice Strand
CG8248-RA 438..962 12..540 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:14:55 Download gff for BS06145.complete
Subject Subject Range Query Range Percent Splice Strand
CG8248-RA 444..962 17..535 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:17:53 Download gff for BS06145.complete
Subject Subject Range Query Range Percent Splice Strand
CG8248-RA 438..962 12..540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:10:26 Download gff for BS06145.complete
Subject Subject Range Query Range Percent Splice Strand
CG8248-RA 444..962 17..535 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:10:26 Download gff for BS06145.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8919350..8919466 419..535 100 <- Minus
2R 8919524..8919925 17..418 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:14:55 Download gff for BS06145.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4806855..4806971 419..535 100 <- Minus
arm_2R 4807029..4807430 17..418 100   Minus

BS06145.pep Sequence

Translation from 16 to 534

> BS06145.pep
MVAGMQRNYRHYFKPGVAAFDLHHAQPEAMADAELDVAAPDASCQRLDVF
GKESNRNQAVSRRSQGRPTKRTKNGTGNGVSKQPRRLIKSPEGHKKKEVG
KKSNTAEPIIYLFALVFVYLLLKAASDINQHYKSQNKGDKRLRRCSLQSY
AQIHKQDRRSSKGISPKSLPKF*

BS06145.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:46:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG8248-PA 227 CG8248-PA 56..227 1..172 891 100 Plus
CG8248-PB 226 CG8248-PB 56..226 1..172 874 99.4 Plus