Clone BS06150 Report

Search the DGRC for BS06150

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:61
Well:50
Vector:pDNR-Dual
Associated Gene/Transcriptl(1)G0004-RA
Protein status:BS06150.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06150.3prime Sequence

753 bp (752 high quality bases) assembled on 2005-12-03

> BS06150.3prime
ATGGTCTAGAAAGCTTTCACATGCGCTCCGAGAGGCGCGAGGCGACTGCC
CGCAGGTTGCCATACACCTTGCTGGGCGGCGAGCCGAGGATTAGGTTGCA
GACGGCCCGGCGCGCAAGCTGAATGTTCTGGTAGCTGCCCAGGATGTGGA
TCTTGCTATCGGCTAGCACGATGCGGGTCTTGGTCACGTTCTCGATGGTG
AATTTGGTGCGGCCGCCCTTGCCGGCGAGGCGGCCGATGGCGCGAGACTG
GTGGTCGCCGCGCAGCGTCTTCACGTCCTTGATTTCGAACGACTCGACGA
ACAGGTCCTCCAGACGCAGCAGGGCCAGGGCGTCGTCCACCTCGAAGCCG
CAGAGAAAGGCGCGCACGAAGTCGGCGCCGCGCTGCAGGTTGGCTATGTC
CGGCGTCTCGGGGCCCACACGCAGCTCCACCTGGCGCGCCTTCATGTTGA
AGCGGATCTGCAGCTTCATGTGCTCCACCACGGGCGTAAAGATCTTCATC
CAGTGCTCCTTGAGCGAGGAGTACCTGTGTGGCGGCACGGATACCTTGCG
CAGCTCGCTTCTGGCCCGCTTTGCCTTGGGCGGCGCCGATGCTCGCGAAG
ATCCCAGCACCTGGCCCTCAATGCCGGTCGCCTCGTCCACCTGCATCTCC
ACGTCCTGCTGCCCGCCTCCGCTGGCTCCGCGCTTCGTCGCTCTCTTCGC
CGGCTCGAATGCGTCTGCTCTGATGTTCTCTGCCTCCATGTCGACTGATA
ACT

BS06150.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG11738-PA 723 l(1)G0004-RA 1..723 739..17 3615 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0004-RA 955 CG11738-RA 89..812 740..17 3620 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 17:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20391535..20392258 740..17 3620 100 Minus
Blast to na_te.dros performed on 2015-01-31 17:06:08 has no hits.

BS06150.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:27 Download gff for BS06150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11738-PA 1..723 17..739 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:34 Download gff for BS06150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11738-PA 1..723 17..739 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:30:23 Download gff for BS06150.3prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0004-RA 89..812 17..740 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:47:12 Download gff for BS06150.3prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0004-RA 89..812 17..740 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:47:12 Download gff for BS06150.3prime
Subject Subject Range Query Range Percent Splice Strand
X 20391535..20392258 17..740 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:30:23 Download gff for BS06150.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 20262562..20263285 17..740 100   Minus

BS06150.5prime Sequence

753 bp (736 high quality bases) assembled on 2005-12-03

> BS06150.5prime
GAAGTTATCAGTCGACATGGAGGCAGAGAACATCAGAGCAGACGCATTCG
AGCCGGCGAAGAGAGCGACGAAGCGCGGAGCCAGCGGAGGCGGGCAGCAG
GACGTGGAGATGCAGGTGGACGAGGCGACCGGCATTGAGGGCCAGGTGCT
GGGATCTTCGCGAGCATCGGCGCCGCCCAAGGCAAAGCGGGCCAGAAGCG
AGCTGCGCAAGGTATCCGTGCCGCCACACAGGTACTCCTCGCTCAAGGAG
CACTGGATGAAGATCTTTACGCCCGTGGTGGAGCACATGAAGCTGCAGAT
CCGCTTCAACATGAAGGCGCGCCAGGTGGAGCTGCGTGTGGGCCCCGAGA
CGCCGGACATAGCCAACCTGCAGCGCGGCGCCGACTTCGTGCGCGCCTTT
CTCTGCGGCTTCGAGGTGGACGACGCCCTGGCCCTGCTGCGTCTGGAGGA
CCTGTTCGTCGAGTCGTTCGAAATCAAGGACGTGAAGACGCTGCGCGGCG
ACCACCAGTCTCGCGCCATCGGCCGCCTCGCCGGCAAGGGCGGCCGCACC
AAATTCACCATCGAGAACGTGACCAAGACCCGCATCGTGCTAGCCGATAG
CAAGATCCACATCCTGGGCAGCTACCAGAACATTCAGCTTGCGCGCCGGG
CCGTCTGCAACCTAATCCTCGGCTCGCCGCCCAGCAAGGTGTATGGCAAC
CTGCGGGCAGTCGCCTCGCGCCTCTCGGAGCGCATGTGAAAGCTTTCTAG
ACC

BS06150.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG11738-PA 723 l(1)G0004-RA 1..723 17..739 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0004-RA 955 CG11738-RA 89..812 16..739 3620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20391535..20392258 16..739 3620 100 Plus
Blast to na_te.dros performed on 2015-02-09 23:05:22 has no hits.

BS06150.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:28 Download gff for BS06150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11738-PA 1..723 17..739 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:36 Download gff for BS06150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11738-PA 1..723 17..739 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:30:01 Download gff for BS06150.5prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0004-RA 89..812 16..739 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:51:45 Download gff for BS06150.5prime
Subject Subject Range Query Range Percent Splice Strand
l(1)G0004-RA 89..812 16..739 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:51:45 Download gff for BS06150.5prime
Subject Subject Range Query Range Percent Splice Strand
X 20391535..20392258 16..739 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:30:01 Download gff for BS06150.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 20262562..20263285 16..739 100   Plus

BS06150.complete Sequence

755 bp (755 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ635374

> BS06150.complete
GAAGTTATCAGTCGACATGGAGGCAGAGAACATCAGAGCAGACGCATTCG
AGCCGGCGAAGAGAGCGACGAAGCGCGGAGCCAGCGGAGGCGGGCAGCAG
GACGTGGAGATGCAGGTGGACGAGGCGACCGGCATTGAGGGCCAGGTGCT
GGGATCTTCGCGAGCATCGGCGCCGCCCAAGGCAAAGCGGGCCAGAAGCG
AGCTGCGCAAGGTATCCGTGCCGCCACACAGGTACTCCTCGCTCAAGGAG
CACTGGATGAAGATCTTTACGCCCGTGGTGGAGCACATGAAGCTGCAGAT
CCGCTTCAACATGAAGGCGCGCCAGGTGGAGCTGCGTGTGGGCCCCGAGA
CGCCGGACATAGCCAACCTGCAGCGCGGCGCCGACTTCGTGCGCGCCTTT
CTCTGCGGCTTCGAGGTGGACGACGCCCTGGCCCTGCTGCGTCTGGAGGA
CCTGTTCGTCGAGTCGTTCGAAATCAAGGACGTGAAGACGCTGCGCGGCG
ACCACCAGTCTCGCGCCATCGGCCGCCTCGCCGGCAAGGGCGGCCGCACC
AAATTCACCATCGAGAACGTGACCAAGACCCGCATCGTGCTAGCCGATAG
CAAGATCCACATCCTGGGCAGCTACCAGAACATTCAGCTTGCGCGCCGGG
CCGTCTGCAACCTAATCCTCGGCTCGCCGCCCAGCAAGGTGTATGGCAAC
CTGCGGGCAGTCGCCTCGCGCCTCTCGGAGCGCATGTGAAAGCTTTCTAG
ACCAT

BS06150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0004-RA 723 CG11738-PA 1..723 17..739 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0004-RA 955 CG11738-RA 89..812 16..739 3620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20391535..20392258 16..739 3620 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:01:44 has no hits.

BS06150.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:17:56 Download gff for BS06150.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0004-RA 1..723 17..739 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:58:46 Download gff for BS06150.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0004-RA 85..808 16..739 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:50 Download gff for BS06150.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0004-RA 90..811 17..738 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:17:56 Download gff for BS06150.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0004-RA 85..808 16..739 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:01:10 Download gff for BS06150.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0004-RA 90..811 17..738 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:01:10 Download gff for BS06150.complete
Subject Subject Range Query Range Percent Splice Strand
X 20391536..20392257 17..738 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:50 Download gff for BS06150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20262563..20263284 17..738 100   Plus

BS06150.pep Sequence

Translation from 16 to 738

> BS06150.pep
MEAENIRADAFEPAKRATKRGASGGGQQDVEMQVDEATGIEGQVLGSSRA
SAPPKAKRARSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMK
ARQVELRVGPETPDIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVES
FEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHIL
GSYQNIQLARRAVCNLILGSPPSKVYGNLRAVASRLSERM*

BS06150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:58
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0004-PA 240 CG11738-PA 1..240 1..240 1208 100 Plus