Clone Sequence Records
BS06150.3prime Sequence
753 bp (752 high quality bases) assembled on 2005-12-03
> BS06150.3prime
ATGGTCTAGAAAGCTTTCACATGCGCTCCGAGAGGCGCGAGGCGACTGCC
CGCAGGTTGCCATACACCTTGCTGGGCGGCGAGCCGAGGATTAGGTTGCA
GACGGCCCGGCGCGCAAGCTGAATGTTCTGGTAGCTGCCCAGGATGTGGA
TCTTGCTATCGGCTAGCACGATGCGGGTCTTGGTCACGTTCTCGATGGTG
AATTTGGTGCGGCCGCCCTTGCCGGCGAGGCGGCCGATGGCGCGAGACTG
GTGGTCGCCGCGCAGCGTCTTCACGTCCTTGATTTCGAACGACTCGACGA
ACAGGTCCTCCAGACGCAGCAGGGCCAGGGCGTCGTCCACCTCGAAGCCG
CAGAGAAAGGCGCGCACGAAGTCGGCGCCGCGCTGCAGGTTGGCTATGTC
CGGCGTCTCGGGGCCCACACGCAGCTCCACCTGGCGCGCCTTCATGTTGA
AGCGGATCTGCAGCTTCATGTGCTCCACCACGGGCGTAAAGATCTTCATC
CAGTGCTCCTTGAGCGAGGAGTACCTGTGTGGCGGCACGGATACCTTGCG
CAGCTCGCTTCTGGCCCGCTTTGCCTTGGGCGGCGCCGATGCTCGCGAAG
ATCCCAGCACCTGGCCCTCAATGCCGGTCGCCTCGTCCACCTGCATCTCC
ACGTCCTGCTGCCCGCCTCCGCTGGCTCCGCGCTTCGTCGCTCTCTTCGC
CGGCTCGAATGCGTCTGCTCTGATGTTCTCTGCCTCCATGTCGACTGATA
ACT
BS06150.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11738-PA | 723 | l(1)G0004-RA | 1..723 | 739..17 | 3615 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:06:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-RA | 955 | CG11738-RA | 89..812 | 740..17 | 3620 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 17:06:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20391535..20392258 | 740..17 | 3620 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 17:06:08 has no hits.
BS06150.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:27 Download gff for
BS06150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11738-PA | 1..723 | 17..739 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:34 Download gff for
BS06150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11738-PA | 1..723 | 17..739 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:30:23 Download gff for
BS06150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 89..812 | 17..740 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:47:12 Download gff for
BS06150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 89..812 | 17..740 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:47:12 Download gff for
BS06150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20391535..20392258 | 17..740 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:30:23 Download gff for
BS06150.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20262562..20263285 | 17..740 | 100 | | Minus |
BS06150.5prime Sequence
753 bp (736 high quality bases) assembled on 2005-12-03
> BS06150.5prime
GAAGTTATCAGTCGACATGGAGGCAGAGAACATCAGAGCAGACGCATTCG
AGCCGGCGAAGAGAGCGACGAAGCGCGGAGCCAGCGGAGGCGGGCAGCAG
GACGTGGAGATGCAGGTGGACGAGGCGACCGGCATTGAGGGCCAGGTGCT
GGGATCTTCGCGAGCATCGGCGCCGCCCAAGGCAAAGCGGGCCAGAAGCG
AGCTGCGCAAGGTATCCGTGCCGCCACACAGGTACTCCTCGCTCAAGGAG
CACTGGATGAAGATCTTTACGCCCGTGGTGGAGCACATGAAGCTGCAGAT
CCGCTTCAACATGAAGGCGCGCCAGGTGGAGCTGCGTGTGGGCCCCGAGA
CGCCGGACATAGCCAACCTGCAGCGCGGCGCCGACTTCGTGCGCGCCTTT
CTCTGCGGCTTCGAGGTGGACGACGCCCTGGCCCTGCTGCGTCTGGAGGA
CCTGTTCGTCGAGTCGTTCGAAATCAAGGACGTGAAGACGCTGCGCGGCG
ACCACCAGTCTCGCGCCATCGGCCGCCTCGCCGGCAAGGGCGGCCGCACC
AAATTCACCATCGAGAACGTGACCAAGACCCGCATCGTGCTAGCCGATAG
CAAGATCCACATCCTGGGCAGCTACCAGAACATTCAGCTTGCGCGCCGGG
CCGTCTGCAACCTAATCCTCGGCTCGCCGCCCAGCAAGGTGTATGGCAAC
CTGCGGGCAGTCGCCTCGCGCCTCTCGGAGCGCATGTGAAAGCTTTCTAG
ACC
BS06150.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11738-PA | 723 | l(1)G0004-RA | 1..723 | 17..739 | 3615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:05:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-RA | 955 | CG11738-RA | 89..812 | 16..739 | 3620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:05:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20391535..20392258 | 16..739 | 3620 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 23:05:22 has no hits.
BS06150.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:28 Download gff for
BS06150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11738-PA | 1..723 | 17..739 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:36 Download gff for
BS06150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11738-PA | 1..723 | 17..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:30:01 Download gff for
BS06150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 89..812 | 16..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:51:45 Download gff for
BS06150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 89..812 | 16..739 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:51:45 Download gff for
BS06150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20391535..20392258 | 16..739 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:30:01 Download gff for
BS06150.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20262562..20263285 | 16..739 | 100 | | Plus |
BS06150.complete Sequence
755 bp (755 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635374
> BS06150.complete
GAAGTTATCAGTCGACATGGAGGCAGAGAACATCAGAGCAGACGCATTCG
AGCCGGCGAAGAGAGCGACGAAGCGCGGAGCCAGCGGAGGCGGGCAGCAG
GACGTGGAGATGCAGGTGGACGAGGCGACCGGCATTGAGGGCCAGGTGCT
GGGATCTTCGCGAGCATCGGCGCCGCCCAAGGCAAAGCGGGCCAGAAGCG
AGCTGCGCAAGGTATCCGTGCCGCCACACAGGTACTCCTCGCTCAAGGAG
CACTGGATGAAGATCTTTACGCCCGTGGTGGAGCACATGAAGCTGCAGAT
CCGCTTCAACATGAAGGCGCGCCAGGTGGAGCTGCGTGTGGGCCCCGAGA
CGCCGGACATAGCCAACCTGCAGCGCGGCGCCGACTTCGTGCGCGCCTTT
CTCTGCGGCTTCGAGGTGGACGACGCCCTGGCCCTGCTGCGTCTGGAGGA
CCTGTTCGTCGAGTCGTTCGAAATCAAGGACGTGAAGACGCTGCGCGGCG
ACCACCAGTCTCGCGCCATCGGCCGCCTCGCCGGCAAGGGCGGCCGCACC
AAATTCACCATCGAGAACGTGACCAAGACCCGCATCGTGCTAGCCGATAG
CAAGATCCACATCCTGGGCAGCTACCAGAACATTCAGCTTGCGCGCCGGG
CCGTCTGCAACCTAATCCTCGGCTCGCCGCCCAGCAAGGTGTATGGCAAC
CTGCGGGCAGTCGCCTCGCGCCTCTCGGAGCGCATGTGAAAGCTTTCTAG
ACCAT
BS06150.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:01:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-RA | 723 | CG11738-PA | 1..723 | 17..739 | 3615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:01:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-RA | 955 | CG11738-RA | 89..812 | 16..739 | 3620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:01:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20391535..20392258 | 16..739 | 3620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:01:44 has no hits.
BS06150.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:17:56 Download gff for
BS06150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 1..723 | 17..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:58:46 Download gff for
BS06150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 85..808 | 16..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:50 Download gff for
BS06150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 90..811 | 17..738 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:17:56 Download gff for
BS06150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 85..808 | 16..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:01:10 Download gff for
BS06150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 90..811 | 17..738 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:01:10 Download gff for
BS06150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20391536..20392257 | 17..738 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:50 Download gff for
BS06150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20262563..20263284 | 17..738 | 100 | | Plus |
BS06150.pep Sequence
Translation from 16 to 738
> BS06150.pep
MEAENIRADAFEPAKRATKRGASGGGQQDVEMQVDEATGIEGQVLGSSRA
SAPPKAKRARSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMK
ARQVELRVGPETPDIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVES
FEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHIL
GSYQNIQLARRAVCNLILGSPPSKVYGNLRAVASRLSERM*
BS06150.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-PA | 240 | CG11738-PA | 1..240 | 1..240 | 1208 | 100 | Plus |