Clone Sequence Records
BS06151.3prime Sequence
708 bp (707 high quality bases) assembled on 2005-12-03
> BS06151.3prime
ATGGTCTAGAAAGCTTCTACTTGGGCTCCAGGTGCGCCGTCTCTAGGTTC
TTCATCTTGGGATAGCTAATGGAGCGGCTGTCCAGCTTGGACTGGGCCCA
CAAGATCAGCTTGAGCAGGAACATCATTTTGGGCGTGGAGTCCTCGCTCT
GCTCGCAGCGCAGGATGGCCGAGTTGAGCTCGCTAGCGATCTTCTGGCGG
TACGACTGCTCCAGCAGGTCGGCGAAGGGGCTCTCCTGCGGCTTCTCGAA
GGCGAGCAGGGCCAGGGTGCGCTCCAGCTCAAACATGGCCTCCTCGCCGG
ACTCGGACAGCTTGCTTTGGGCAAAGGACAGGGCCTCCTCCACCTTGCCG
GCGCGTATCAGCTCGATGAGCTGCAGCTGCTGCAGGTGGAAGAACAGATA
GCGATCGCTGCCGAGCAGCTCAGGATGCAGCTGGTTCACCAGCTGGGTGG
CCTCCTCGATGCGGCCCGCCTGCACGGCTTCGCGGATGAGTATGCGCCCA
TCGAGGCTGCTCAGCTCCACGCTGGGCTCCAGATCCGCCTCGTGCTGGAA
CTTCTCGGCGGCCTCCTTGAAGCCCTCTGTGACCAAGTAGTTCATGATCA
GGCGATTCATGTCCGCCTGCTTGAAGGGAAACTGCTCCAGGCGCTGCAGC
CACTCCTCCTTGATGATGGCCTCCGATTTCTCGTTGTAGCTCATGTCGAC
TGATAACT
BS06151.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6617-PA | 678 | CG6617-RA | 1..678 | 694..17 | 3390 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:13:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6617-RA | 989 | CG6617-RA | 175..855 | 694..14 | 3405 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18649530..18650097 | 14..581 | 2840 | 100 | Plus |
| X | 23542271 | X | 18650153..18650270 | 577..694 | 590 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 18:13:26 has no hits.
BS06151.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:29 Download gff for
BS06151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-PA | 1..678 | 17..694 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:37 Download gff for
BS06151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-PA | 1..678 | 17..694 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:09:23 Download gff for
BS06151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 170..855 | 14..701 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:51:31 Download gff for
BS06151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 170..855 | 14..701 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:51:31 Download gff for
BS06151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18649530..18650092 | 14..576 | 100 | <- | Plus |
| X | 18650153..18650275 | 577..701 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:09:23 Download gff for
BS06151.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18543563..18544125 | 14..576 | 100 | <- | Plus |
| arm_X | 18544186..18544308 | 577..701 | 96 | | Plus |
BS06151.5prime Sequence
708 bp (707 high quality bases) assembled on 2005-12-03
> BS06151.5prime
GAAGTTATCAGTCGACATGAGCTACAACGAGAAATCGGAGGCCATCATCA
AGGAGGAGTGGCTGCAGCGCCTGGAGCAGTTTCCCTTCAAGCAGGCGGAC
ATGAATCGCCTGATCATGAACTACTTGGTCACAGAGGGCTTCAAGGAGGC
CGCCGAGAAGTTCCAGCACGAGGCGGATCTGGAGCCCAGCGTGGAGCTGA
GCAGCCTCGATGGGCGCATACTCATCCGCGAAGCCGTGCAGGCGGGCCGC
ATCGAGGAGGCCACCCAGCTGGTGAACCAGCTGCATCCTGAGCTGCTCGG
CAGCGATCGCTATCTGTTCTTCCACCTGCAGCAGCTGCAGCTCATCGAGC
TGATACGCGCCGGCAAGGTGGAGGAGGCCCTGTCCTTTGCCCAAAGCAAG
CTGTCCGAGTCCGGCGAGGAGGCCATGTTTGAGCTGGAGCGCACCCTGGC
CCTGCTCGCCTTCGAGAAGCCGCAGGAGAGCCCCTTCGCCGACCTGCTGG
AGCAGTCGTACCGCCAGAAGATCGCTAGCGAGCTCAACTCGGCCATCCTG
CGCTGCGAGCAGAGCGAGGACTCCACGCCCAAAATGATGTTCCTGCTCAA
GCTGATCTTGTGGGCCCAGTCCAAGCTGGACAGCCGCTCCATTAGCTATC
CCAAGATGAAGAACCTAGAGACGGCGCACCTGGAGCCCAAGTAGAAGCTT
TCTAGACC
BS06151.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6617-PA | 678 | CG6617-RA | 1..678 | 17..694 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:46:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6617-RA | 989 | CG6617-RA | 175..855 | 17..697 | 3405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18649530..18650097 | 697..130 | 2840 | 100 | Minus |
| X | 23542271 | X | 18650153..18650270 | 134..17 | 590 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 02:46:05 has no hits.
BS06151.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:30 Download gff for
BS06151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-PA | 1..678 | 17..694 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:39 Download gff for
BS06151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-PA | 1..678 | 17..694 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 04:53:41 Download gff for
BS06151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 170..855 | 10..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:39:05 Download gff for
BS06151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 170..855 | 10..697 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:39:05 Download gff for
BS06151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18649530..18650092 | 135..697 | 100 | <- | Minus |
| X | 18650153..18650275 | 10..134 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 04:53:41 Download gff for
BS06151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18543563..18544125 | 135..697 | 100 | <- | Minus |
| arm_X | 18544186..18544308 | 10..134 | 96 | | Minus |
BS06151.complete Sequence
710 bp (710 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635375
> BS06151.complete
GAAGTTATCAGTCGACATGAGCTACAACGAGAAATCGGAGGCCATCATCA
AGGAGGAGTGGCTGCAGCGCCTGGAGCAGTTTCCCTTCAAGCAGGCGGAC
ATGAATCGCCTGATCATGAACTACTTGGTCACAGAGGGCTTCAAGGAGGC
CGCCGAGAAGTTCCAGCACGAGGCGGATCTGGAGCCCAGCGTGGAGCTGA
GCAGCCTCGATGGGCGCATACTCATCCGCGAAGCCGTGCAGGCGGGCCGC
ATCGAGGAGGCCACCCAGCTGGTGAACCAGCTGCATCCTGAGCTGCTCGG
CAGCGATCGCTATCTGTTCTTCCACCTGCAGCAGCTGCAGCTCATCGAGC
TGATACGCGCCGGCAAGGTGGAGGAGGCCCTGTCCTTTGCCCAAAGCAAG
CTGTCCGAGTCCGGCGAGGAGGCCATGTTTGAGCTGGAGCGCACCCTGGC
CCTGCTCGCCTTCGAGAAGCCGCAGGAGAGCCCCTTCGCCGACCTGCTGG
AGCAGTCGTACCGCCAGAAGATCGCTAGCGAGCTCAACTCGGCCATCCTG
CGCTGCGAGCAGAGCGAGGACTCCACGCCCAAAATGATGTTCCTGCTCAA
GCTGATCTTGTGGGCCCAGTCCAAGCTGGACAGCCGCTCCATTAGCTATC
CCAAGATGAAGAACCTAGAGACGGCGCACCTGGAGCCCAAGTAGAAGCTT
TCTAGACCAT
BS06151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:03:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6617-RA | 678 | CG6617-PA | 1..678 | 17..694 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:03:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6617-RA | 989 | CG6617-RA | 175..855 | 17..697 | 3405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:03:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18649530..18650097 | 697..130 | 2840 | 100 | Minus |
| X | 23542271 | X | 18650153..18650270 | 134..17 | 590 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:03:04 has no hits.
BS06151.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:17:57 Download gff for
BS06151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 1..678 | 17..694 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:58:47 Download gff for
BS06151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 166..851 | 10..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:45:02 Download gff for
BS06151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 175..852 | 17..694 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:17:57 Download gff for
BS06151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 166..851 | 10..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:44 Download gff for
BS06151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 175..852 | 17..694 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:44 Download gff for
BS06151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18649533..18650092 | 135..694 | 100 | <- | Minus |
| X | 18650153..18650270 | 17..134 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:45:02 Download gff for
BS06151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18543566..18544125 | 135..694 | 100 | <- | Minus |
| arm_X | 18544186..18544303 | 17..134 | 100 | | Minus |
BS06151.pep Sequence
Translation from 16 to 693
> BS06151.pep
MSYNEKSEAIIKEEWLQRLEQFPFKQADMNRLIMNYLVTEGFKEAAEKFQ
HEADLEPSVELSSLDGRILIREAVQAGRIEEATQLVNQLHPELLGSDRYL
FFHLQQLQLIELIRAGKVEEALSFAQSKLSESGEEAMFELERTLALLAFE
KPQESPFADLLEQSYRQKIASELNSAILRCEQSEDSTPKMMFLLKLILWA
QSKLDSRSISYPKMKNLETAHLEPK*
BS06151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6617-PA | 225 | CG6617-PA | 1..225 | 1..225 | 1119 | 100 | Plus |
| CG18467-PA | 237 | CG18467-PA | 10..209 | 15..205 | 504 | 48 | Plus |
