Clone BS06157 Report

Search the DGRC for BS06157

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:61
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG8525-RA
Protein status:BS06157.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06157.3prime Sequence

950 bp (806 high quality bases) assembled on 2005-12-03

> BS06157.3prime
ATGGTCTAGAAAGCTTCTACTTCTTCCGCAGCTCCTTGCAGAAGGTCTCG
GCAGCAGCAGCCTCGCGAGACACGGGCACATTTTTCTGAGCCTCATCCTC
CTCGAGTTTTTTGACACCCTGACGCACAACGCGTTCAATGTCGTCCAGCA
ATCCGGAGGCTCCGAAACGGAACCTCTCGGGACGCAACCAGCGGATGCCA
AGAGTTTCGTTGACCAACGTCATCCAGGCGATCGCATCTCGTACAGTCTT
TACTCCTCCGGCTGGCTTAAGGCCCACAATCTGGCACGTGCGTCGTTTGA
ATTCCTGAATGGCAAATATCATGACCAGGCCAACGGGCAGGGTGGCGTTG
ACTGTCTCCTTTCCCGTTGAGGTCTTGATAAAATCCGCTCCGGCCATCAT
GCAAACCATGGCTGCTTTGTAAACATTATCCATGGTGCCCAGCTCCCCGA
TGGCCAGAATTGTTTTTAGGTGAGCCCTTTGTCCACAGGCACTGCGCATA
AGGACCACCTCGTTGTACATGGCCTCCCAGTCGCCAACGAGGGCCAACTG
GCGATTGATCACAATGTCGATCTCTGTGGCTCCAGCAAGAATGGCGTGGC
TGATCTCCTGCAGGCGGGTCTGCAGGCCGTACTGGCCCGTGGGAAATCCC
GTGGCCACCGCTGCAATAGCCACCTTATCCAGTTTGTCGTACTGTTGGAT
AGCTAAATAGGCGTCCTTTACCCTGGCGGGATAAACGCAAACGGCGGCCG
TGTGCATCTCTGGGATGAGAGCCCGGTCGAAGAACTTGTCAAAGAACTGC
GGCTCGAAGGGATAGCAGGCGCGTAGGCATAGTCTCCGCACATTGGCAGC
CGTATCATCGCCCGCCAAGGTGGTAAGATCTGTCAGCATCAGAGCCCTCA
GCGCCCAGGCGATTTCGTTGGCTCCGGTGACATGGCATCGCTGGGACACC

BS06157.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-PA 1044 CG8525-RA 111..1044 950..17 4670 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-RD 1269 CG8525-RD 230..1163 950..17 4670 100 Minus
CG8525-RA 1378 CG8525-RA 339..1272 950..17 4670 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:55:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12425874..12426401 950..423 2640 100 Minus
2R 25286936 2R 12426462..12426869 424..17 2040 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:55:27 has no hits.

BS06157.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:42 Download gff for BS06157.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-PA 111..1044 17..950 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:53 Download gff for BS06157.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-PA 111..1044 17..950 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:17:32 Download gff for BS06157.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 339..1275 14..950 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:54:12 Download gff for BS06157.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 339..1275 14..950 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:54:12 Download gff for BS06157.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12425874..12426399 425..950 100 -> Minus
2R 12426462..12426872 14..424 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:17:32 Download gff for BS06157.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8313379..8313904 425..950 100 -> Minus
arm_2R 8313967..8314377 14..424 99   Minus

BS06157.5prime Sequence

957 bp (769 high quality bases) assembled on 2005-12-03

> BS06157.5prime
GAAGTTATCAGTCGACATGAGCAGCATGGATGTGAAGGAATTGGAAGTAA
ACAAAACCCTGCCCTATGATCCCTCCCTGCTTAAGGTAAACATCTCGCTG
CGGCAGGTCGAGGAGATCGCTTTGACGGTGTCCCAGCGATGCCATGTCAC
CGGAGCCAACGAAATCGCCTGGGCGCTGAGGGCTCTGATGCTGACAGATC
TTACCACCTTGGCGGGCGATGATACGGCTGCCAATGTGCGGAGACTATGC
CTACGCGCCTGCTATCCCTTCGAGCCGCAGTTCTTTGACAAGTTCTTCGA
CCGGGCTCTCATCCCAGAGATGCACACGGCCGCCGTTTGCGTTTATCCCG
CCAGGGTAAAGGACGCCTATTTAGCTATCCAACAGTACGACAAACTGGAT
AAGGTGGCTATTGCAGCGGTGGCCACGGGATTTCCCACGGGCCAGTACGG
CCTGCAGACCCGCCTGCAGGAGATCAGCCACGCCATTCTTGCTGGAGCCA
CAGAGATCGACATTGTGATCAATCGCCAGTTGGCCCTCGTTGGCGACTGG
GAGGCCATGTACAACGAGGTGGTCCTTATGCGCAGTGCCTGTGGACAAAG
GGCTCACCTAAAAACAATTCTGGCCATCGGGGAGCTGGGCACCATGGATA
ATGTTTACAAAGCAGCCATGGTTTGCATGATGGCCGGAGCGGATTTTATC
AAGACCTCAACGGGAAAGGAGACAGTCAACGCCACCCTGCCCGTTGGCCT
GGTCATGATATTTGCCATTCANGAATTCAAACGACGCACGTGCCAGATTG
TGGGCCTTAAGCCAGCCGGAGGAGTAAAGACTGTACGAGATGCGATCGCC
TGGATGACGTTGGTCAACGAAACTCTTGGCATCCGCTGGTTGCGTCCCGA
GAGGTTCCGTTTCGGAGCCTCCCGAATGCTGGACGACATTGAAACGCGTG
TGCGTCA

BS06157.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-PA 1044 CG8525-RA 1..927 17..943 4566 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:36:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-RD 1269 CG8525-RD 120..1060 17..957 4619 99.5 Plus
CG8525-RA 1378 CG8525-RA 229..1169 17..957 4619 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:36:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12425815..12426401 68..654 2935 100 Plus
2R 25286936 2R 12426462..12426752 653..943 1414 99 Plus
2R 25286936 2R 12425711..12425762 17..68 260 100 Plus
Blast to na_te.dros performed on 2015-02-13 08:36:34 has no hits.

BS06157.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:43 Download gff for BS06157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-PA 1..940 17..956 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:54 Download gff for BS06157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-PA 1..940 17..956 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:18:23 Download gff for BS06157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 224..1168 9..956 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:24:40 Download gff for BS06157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 224..1168 9..956 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:24:40 Download gff for BS06157.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12425706..12425762 9..68 95 -> Plus
2R 12426462..12426765 653..956 98   Plus
2R 12425816..12426399 69..652 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:18:23 Download gff for BS06157.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8313211..8313267 9..68 95 -> Plus
arm_2R 8313321..8313904 69..652 100 -> Plus
arm_2R 8313967..8314270 653..956 98   Plus

BS06157.complete Sequence

1076 bp (1076 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ635378

> BS06157.complete
GAAGTTATCAGTCGACATGAGCAGCATGGATGTGAAGGAATTGGAAGTAA
ACAAAACCCTGCCCTATGATCCCTCCCTGCTTAAGGTAAACATCTCGCTG
CGGCAGGTCGAGGAGATCGCTTTGACGGTGTCCCAGCGATGCCATGTCAC
CGGAGCCAACGAAATCGCCTGGGCGCTGAGGGCTCTGATGCTGACAGATC
TTACCACCTTGGCGGGCGATGATACGGCTGCCAATGTGCGGAGACTATGC
CTACGCGCCTGCTATCCCTTCGAGCCGCAGTTCTTTGACAAGTTCTTCGA
CCGGGCTCTCATCCCAGAGATGCACACGGCCGCCGTTTGCGTTTATCCCG
CCAGGGTAAAGGACGCCTATTTAGCTATCCAACAGTACGACAAACTGGAT
AAGGTGGCTATTGCAGCGGTGGCCACGGGATTTCCCACGGGCCAGTACGG
CCTGCAGACCCGCCTGCAGGAGATCAGCCACGCCATTCTTGCTGGAGCCA
CAGAGATCGACATTGTGATCAATCGCCAGTTGGCCCTCGTTGGCGACTGG
GAGGCCATGTACAACGAGGTGGTCCTTATGCGCAGTGCCTGTGGACAAAG
GGCTCACCTAAAAACAATTCTGGCCATCGGGGAGCTGGGCACCATGGATA
ATGTTTACAAAGCAGCCATGGTTTGCATGATGGCCGGAGCGGATTTTATC
AAGACCTCAACGGGAAAGGAGACAGTCAACGCCACCCTGCCCGTTGGCCT
GGTCATGATATTTGCCATTCAGGAATTCAAACGACGCACGTGCCAGATTG
TGGGCCTTAAGCCAGCCGGAGGAGTAAAGACTGTACGAGATGCGATCGCC
TGGATGACGTTGGTCAACGAAACTCTTGGCATCCGCTGGTTGCGTCCCGA
GAGGTTCCGTTTCGGAGCCTCCGGATTGCTGGACGACATTGAACGCGTTG
TGCGTCAGGGTGTCAAAAAACTCGAGGAGGATGAGGCTCAGAAAAATGTG
CCCGTGTCTCGCGAGGCTGCTGCTGCCGAGACCTTCTGCAAGGAGCTGCG
GAAGAAGTAGAAGCTTTCTAGACCAT

BS06157.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:53:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-RD 1044 CG8525-PD 1..1044 17..1060 5220 100 Plus
CG8525-RA 1044 CG8525-PA 1..1044 17..1060 5220 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-RD 1269 CG8525-RD 120..1163 17..1060 5220 100 Plus
CG8525-RA 1378 CG8525-RA 229..1272 17..1060 5220 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12425815..12426401 68..654 2935 100 Plus
2R 25286936 2R 12426462..12426869 653..1060 2040 100 Plus
2R 25286936 2R 12425711..12425762 17..68 260 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:53:08 has no hits.

BS06157.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:17:44 Download gff for BS06157.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 1..1044 17..1060 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:58:29 Download gff for BS06157.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 249..1300 9..1063 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:34:43 Download gff for BS06157.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 229..1272 17..1060 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:17:44 Download gff for BS06157.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 249..1300 9..1063 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:28:51 Download gff for BS06157.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 229..1272 17..1060 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:28:51 Download gff for BS06157.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12425711..12425762 17..68 100 -> Plus
2R 12425816..12426399 69..652 100 -> Plus
2R 12426462..12426869 653..1060 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:34:43 Download gff for BS06157.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8313216..8313267 17..68 100 -> Plus
arm_2R 8313321..8313904 69..652 100 -> Plus
arm_2R 8313967..8314374 653..1060 100   Plus

BS06157.pep Sequence

Translation from 16 to 1059

> BS06157.pep
MSSMDVKELEVNKTLPYDPSLLKVNISLRQVEEIALTVSQRCHVTGANEI
AWALRALMLTDLTTLAGDDTAANVRRLCLRACYPFEPQFFDKFFDRALIP
EMHTAAVCVYPARVKDAYLAIQQYDKLDKVAIAAVATGFPTGQYGLQTRL
QEISHAILAGATEIDIVINRQLALVGDWEAMYNEVVLMRSACGQRAHLKT
ILAIGELGTMDNVYKAAMVCMMAGADFIKTSTGKETVNATLPVGLVMIFA
IQEFKRRTCQIVGLKPAGGVKTVRDAIAWMTLVNETLGIRWLRPERFRFG
ASGLLDDIERVVRQGVKKLEEDEAQKNVPVSREAAAAETFCKELRKK*

BS06157.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:46:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-PD 347 CG8525-PD 1..347 1..347 1764 100 Plus
CG8525-PA 347 CG8525-PA 1..347 1..347 1764 100 Plus