Clone BS06158 Report

Search the DGRC for BS06158

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:61
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG10591-RA
Protein status:BS06158.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06158.3prime Sequence

862 bp (738 high quality bases) assembled on 2005-12-03

> BS06158.3prime
ATGGTCTAGAAAGCTTTCAAATGATGACTGCATATTGGTTTGAGTTACGC
GGTTGGATGAGCGTGGCATACTTCTCCTTCAGTTCGACCAAAGCCCTCTG
GAAGTTCTCCACGCTGCTCTCGAGCTGGTTGGGACTGAGCTGCTGGACGG
ACTGGCCCTTGAGTAGACCATCGGTGGGTCGCTCTCCCAGGAGGAGAATC
CTTCTCCAATCGCTGGCATCGGAGCTACCTCGCAGGAAGTCCTTGCGATT
GCCAACCGCAAACACAGTTTCCTCCATATTCTCGGGCAAAATTGTGGGCT
GCTGGGCTCCCAGATCGCCGGGCGTGGGTTGAGTTGGTGGCACTTGGACT
GCTGGTGGTGTGATCCCCGAGAGAGATGACGATGTGGGTTGCGGTGGAGG
AATGGGAGCACCGGAACCTTGGTTCACCGGTGTATCGAACAGTTCACTGG
GCAGATTCTGCGGTCGATCGATCTGCACCACCTGGCCATCGGGTGAAATG
TGGAAGAACTGAGCGCGACCAGCTAATCCCGTTCCTGGTCCTCCTGGAAT
CACTATAATGTTGCCCACAGCGGTGGTCAATGCAGAGGCTCCACCAAATC
CGCCACCACCTGGGGTGGAAATGAAAGGAGGGACTGGAACTCCCGGTGGC
GGAAAGGATCTCAAAGGTGGAGGAGCTGGGCATGGGAAACAATATCCAGG
AGGACCAGGCGGTCCTGGTAAGCCTCTAGGCCCCTGGATGAAAGGCAGAT
TTGGGGGGTAAGGACCTGTGGGTGGATAGCCCCAGTAGCCAGAACCACTG
CCAGAGAGACCGTTCTGATTGCCAGGAGGTCCAGGCGGACCTGGAGGTCC
TCGTTCCCCCTG

BS06158.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10591-PA 939 CG10591-RA 94..939 862..17 4230 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:15:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG10591-RA 1075 CG10591-RA 129..975 862..16 4235 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:15:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5598657..5599503 16..862 4235 100 Plus
Blast to na_te.dros performed on 2015-02-10 19:15:37 has no hits.

BS06158.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:44 Download gff for BS06158.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10591-PA 94..939 17..862 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:55 Download gff for BS06158.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10591-PA 94..939 17..862 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:16:29 Download gff for BS06158.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10591-RA 129..975 16..862 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:34:29 Download gff for BS06158.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10591-RA 129..975 16..862 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:34:29 Download gff for BS06158.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 5598657..5599503 16..862 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:16:29 Download gff for BS06158.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5591757..5592603 16..862 100   Plus

BS06158.5prime Sequence

763 bp (698 high quality bases) assembled on 2005-12-03

> BS06158.5prime
GAAGTTATCAGTCGACATGAGTTTTTTGGGACTCTTGGCTTTTCTGGTTG
CTGGTCTTTGCTCCACCGCCCAGGCTTCGTTGGTGAAATGCTCTTGTGAT
CCTGGTCCACAGGGGGAACGAGGACCTCCAGGTCCGCCTGGACCTCCTGG
CAATCAGAACGGTCTCTCTGGCAGTGGTTCTGGCTACTGGGGCTATCCAC
CCACAGGTCCTTACCCCCCAAATCTGCCTTTCATCCAGGGGCCTAGAGGC
TTACCAGGACCGCCTGGTCCTCCTGGATATTGTTTCCCATGCCCAGCTCC
TCCACCTTTGAGATCCTTTCCGCCACCGGGAGTTCCAGTCCCTCCTTTCA
TTTCCACCCCAGGTGGTGGCGGATTTGGTGGAGCCTCTGCATTGACCACC
GCTGTGGGCAACATTATAGTGATTCCAGGAGGACCAGGAACGGGATTAGC
TGGTCGCGCTCAGTTCTTCCACATTTCACCCGATGGCCAGGTGGTGCAGA
TCGATCGACCGCAGAATCTGCCCAGTGAACTGTTCGATACACCGGTGAAC
CAAGGTTCCGGTGCTCCCATTCCTCCACCGCAACCCACATCGTCATCTCT
CTCGGGGATCACACCACCAGCAGTCCAAGTGCCACCAACTCAACCCACGC
CCGGCGATCTGGGAGCCCAGCAGCCCACAATTTTGCCCGAGAATATGGAG
GAAACTGTGTTTGCGGTTGGCAATCGCAAGGACTTCCTGCGAGGTAGCTC
CGATGCCAGCGAT

BS06158.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10591-PA 939 CG10591-RA 1..747 17..763 3735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG10591-RA 1075 CG10591-RA 35..782 16..763 3740 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:18:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5598850..5599560 763..53 3555 100 Minus
3L 28110227 3L 5599619..5599658 55..16 200 100 Minus
Blast to na_te.dros performed on 2015-02-13 01:18:16 has no hits.

BS06158.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:45 Download gff for BS06158.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10591-PA 1..747 17..763 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:08:57 Download gff for BS06158.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10591-PA 1..747 17..763 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:32:48 Download gff for BS06158.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10591-RA 28..782 10..763 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:04:33 Download gff for BS06158.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10591-RA 28..782 10..763 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:04:33 Download gff for BS06158.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 5598850..5599559 54..763 100 <- Minus
3L 5599621..5599665 10..53 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:32:48 Download gff for BS06158.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5591950..5592659 54..763 100 <- Minus
arm_3L 5592721..5592765 10..53 93   Minus

BS06158.complete Sequence

971 bp (971 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ635379

> BS06158.complete
GAAGTTATCAGTCGACATGAGTTTTTTGGGACTCTTGGCTTTTCTGGTTG
CTGGTCTTTGCTCCACCGCCCAGGCTTCGTTGGTGAAATGCTCTTGTGAT
CCTGGTCCACAGGGGGAACGAGGACCTCCAGGTCCGCCTGGACCTCCTGG
CAATCAGAACGGTCTCTCTGGCAGTGGTTCTGGCTACTGGGGCTATCCAC
CCACAGGTCCTTACCCCCCAAATCTGCCTTTCATCCAGGGGCCTAGAGGC
TTACCAGGACCGCCTGGTCCTCCTGGATATTGTTTCCCATGCCCAGCTCC
TCCACCTTTGAGATCCTTTCCGCCACCGGGAGTTCCAGTCCCTCCTTTCA
TTTCCACCCCAGGTGGTGGCGGATTTGGTGGAGCCTCTGCATTGACCACC
GCTGTGGGCAACATTATAGTGATTCCAGGAGGACCAGGAACGGGATTAGC
TGGTCGCGCTCAGTTCTTCCACATTTCACCCGATGGCCAGGTGGTGCAGA
TCGATCGACCGCAGAATCTGCCCAGTGAACTGTTCGATACACCGGTGAAC
CAAGGTTCCGGTGCTCCCATTCCTCCACCGCAACCCACATCGTCATCTCT
CTCGGGGATCACACCACCAGCAGTCCAAGTGCCACCAACTCAACCCACGC
CCGGCGATCTGGGAGCCCAGCAGCCCACAATTTTGCCCGAGAATATGGAG
GAAACTGTGTTTGCGGTTGGCAATCGCAAGGACTTCCTGCGAGGTAGCTC
CGATGCCAGCGATTGGAGAAGGATTCTCCTCCTGGGAGAGCGACCCACCG
ATGGTCTACTCAAGGGCCAGTCCGTCCAGCAGCTCAGTCCCAACCAGCTC
GAGAGCAGCGTGGAGAACTTCCAGAGGGCTTTGGTCGAACTGAAGGAGAA
GTATGCCACGCTCATCCAACCGCGTAACTCAAACCAATATGCAGTCATCA
TTTGAAAGCTTTCTAGACCAT

BS06158.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:50:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10591-RA 939 CG10591-PA 1..939 17..955 4695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:50:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG10591-RA 1075 CG10591-RA 35..975 16..956 4705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:50:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5598657..5599560 956..53 4520 100 Minus
3L 28110227 3L 5599619..5599658 55..16 200 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:50:30 has no hits.

BS06158.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:17:45 Download gff for BS06158.complete
Subject Subject Range Query Range Percent Splice Strand
CG10591-RA 1..939 17..955 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:58:31 Download gff for BS06158.complete
Subject Subject Range Query Range Percent Splice Strand
CG10591-RA 25..972 10..956 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:14 Download gff for BS06158.complete
Subject Subject Range Query Range Percent Splice Strand
CG10591-RA 36..973 17..954 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:17:46 Download gff for BS06158.complete
Subject Subject Range Query Range Percent Splice Strand
CG10591-RA 25..972 10..956 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:28:19 Download gff for BS06158.complete
Subject Subject Range Query Range Percent Splice Strand
CG10591-RA 36..973 17..954 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:28:19 Download gff for BS06158.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5598659..5599559 54..954 100 <- Minus
3L 5599621..5599657 17..53 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:14 Download gff for BS06158.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5591759..5592659 54..954 100 <- Minus
arm_3L 5592721..5592757 17..53 100   Minus

BS06158.pep Sequence

Translation from 16 to 954

> BS06158.pep
MSFLGLLAFLVAGLCSTAQASLVKCSCDPGPQGERGPPGPPGPPGNQNGL
SGSGSGYWGYPPTGPYPPNLPFIQGPRGLPGPPGPPGYCFPCPAPPPLRS
FPPPGVPVPPFISTPGGGGFGGASALTTAVGNIIVIPGGPGTGLAGRAQF
FHISPDGQVVQIDRPQNLPSELFDTPVNQGSGAPIPPPQPTSSSLSGITP
PAVQVPPTQPTPGDLGAQQPTILPENMEETVFAVGNRKDFLRGSSDASDW
RRILLLGERPTDGLLKGQSVQQLSPNQLESSVENFQRALVELKEKYATLI
QPRNSNQYAVII*

BS06158.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:46:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG10591-PA 312 CG10591-PA 1..312 1..312 1690 100 Plus
CG10625-PJ 752 CG10625-PJ 131..300 30..222 200 32 Plus
CG10625-PI 766 CG10625-PI 131..300 30..222 200 32 Plus
CG10625-PH 1180 CG10625-PH 545..714 30..222 200 32 Plus
CG10625-PD 268 CG10625-PD 134..222 30..116 184 48.3 Plus
CG10625-PJ 752 CG10625-PJ 159..373 29..232 174 31.3 Plus
CG10625-PI 766 CG10625-PI 159..373 29..232 174 31.3 Plus
CG10625-PH 1180 CG10625-PH 573..787 29..232 174 31.3 Plus
CG10625-PJ 752 CG10625-PJ 83..260 32..220 154 33.8 Plus
CG10625-PI 766 CG10625-PI 83..260 32..220 154 33.8 Plus