Clone BS06164 Report

Search the DGRC for BS06164

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:61
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG6005-RA
Protein status:BS06164.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06164.3prime Sequence

918 bp (771 high quality bases) assembled on 2005-12-03

> BS06164.3prime
ATGGTCTAGAAAGCTTCTAAATCCAACTGCGTCCCAGACTGCCAGACCTG
CGTTTGGTGGACTTTTCTCCCAGAGAACTGGCTGTCTGGTCCTTGCGCCC
CATCACAGGCGAGCTGCCCGATCCAATATTACGGATTAACTGCTTAAGGC
TGCGCGCCTGTGCGTCGCTGGCCTGGCTCACGCTGTTCGCCTCGGAAGCA
ATGATGCAGAAATCATCGACTATGTGTCCGGGAGGACTGATGTCGAAAGG
CAGAATGTCGCTCAGGCTCTGCTGCTGGCGATACACGCTGCGTCTGCGGG
CTCCATTGTCGACCCCACCGCCAAGTGAACTTCCGCTTGCGGCCGCAGTT
CCTGATTGTTGCTGGGTCATCTGGTTCAGCTCCTGCTGCAAGTTGAGTAC
CCGAGTGCGTAGCCCAGCGTTGTCTTCGCTGAGACGCTGCATGTGGGCCG
CTTCCTGCTCCGCCCGCACGAATGTGGGCTGCGGCAGGCACTGGTATACG
GTGGTCAGGAAGTTGCGCAGCGACAGAAGCAACGTATCCTGCCATTGCTT
GGTGAAGAACAGGGCAAAAGTGGGCGACTCCTCGGCATTCTTGCAAAACG
GAAAGTAGAACCAATCCTTCCACTCGCTTTGCTGCTGCAGATCGCCCGCC
AACTTGTTAAAGAACTCGGACACCTTCTCAGGTCGATTGCTGCTGTAGGC
GGTCACCAGGTAGTATTTTAGGAGGCTGTTTTCCAGTTTCTTGACAGCAA
CGGCATACGTATGCTCCAGCTTGGAAAATATGTTGTTGTCCAGGTGAAAC
CACAAACTCCTGAGAGCCTGAAGGTCAGACGCTTGCACAGCATTATTGAA
TTTGCTCAGAATTCGTTCCGCACGGAAGTGCTGGTCCTTCTCAGTGCGCT
GCTCCAAGTCGAGGGCCT

BS06164.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG6005-PA 975 CG6005-RA 140..975 852..17 4180 100 Minus
CG6005-PA 975 CG6005-RA 74..135 918..857 310 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 08:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG6005-RB 1456 CG6005-RB 160..1061 918..17 4465 99.8 Minus
CG6005-RA 1313 CG6005-RA 160..1061 918..17 4465 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 08:41:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19022853..19023442 17..606 2950 100 Plus
3R 32079331 3R 19023701..19023871 748..918 795 97.7 Plus
3R 32079331 3R 19023504..19023645 607..748 710 100 Plus
Blast to na_te.dros performed on 2015-02-01 08:41:34 has no hits.

BS06164.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:55 Download gff for BS06164.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6005-PA 74..975 17..918 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:09:10 Download gff for BS06164.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6005-PA 74..975 17..918 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:27:49 Download gff for BS06164.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6005-RA 152..1053 17..918 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:54:36 Download gff for BS06164.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6005-RA 160..1061 17..918 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:54:36 Download gff for BS06164.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 19022853..19023442 17..606 100 <- Plus
3R 19023504..19023644 607..747 100 <- Plus
3R 19023701..19023871 748..918 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:27:49 Download gff for BS06164.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14848575..14849164 17..606 100 <- Plus
arm_3R 14849226..14849366 607..747 100 <- Plus
arm_3R 14849423..14849593 748..918 98   Plus

BS06164.5prime Sequence

814 bp (793 high quality bases) assembled on 2005-12-03

> BS06164.5prime
GAAGTTATCAGTCGACATGGCACAAGTCGCTTTTCTGGACAACCTGCTTA
GGGAGTACCTAGTTTTTCGAGGTTTCTCCAGCACCTTGAAGGCCCTCGAC
TTGGAGCAGCGCACTGAGAAGGACCAGCACTTCCGTGCGGAACGAATTCT
GGAGCAATTCAATAATGCTGTGCAAGCGTCTGACCTTCAGGCTCTCAGGA
GTTTGTGGTTTCACCTGGACAACAACATATTTTCCAAGCTGGAGCATACG
TATGCCGTTGCTGTCAAGAAACTGGAAAACAGCCTCCTAAAATACTACCT
GGTGACCGCCTACAGCAGCAATCGACCTGAGAAGGTGTCCGAGTTCTTTA
ACAAGTTGGCGGGCGATCTGCAGCAGCAAAGCGAGTGGAAGGATTGGTTC
TACTTTCCGTTTTGCAAGAATGCCGAGGAGTCGCCCACTTTTGCCCTGTT
CTTCACCAAGCAATGGCAGGATACGTTGCTTCTGTCGCTGCGCAACTTCC
TGACCACCGTATACCAGTGCCTGCCGCAGCCCACATTCGTGCGGGCGGAG
CAGGAAGCGGCCCACATGCAGCGTCTCAGCGAAGACAACGCTGGGCTACG
CACTCGGGTACTCAACTTGCAGCAGGAGCTGAACCAGATGACCCAGCAAC
AATCAGGAACTGCGGCCGCAAGCGGAAGTTCACTTGGCGGTGGGGTCGAC
AATGGAGCCCGCAGACGCAGCGTGTATCGCCAGCAGCAGAGCCTGAGCGA
CATTCTGCCTTTCGACATCAGTCCTCCCGGACACATAGTCGATGATTTCT
GCATCATTGCTTCC

BS06164.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6005-PA 975 CG6005-RA 1..798 17..814 3990 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:18:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6005-RB 1456 CG6005-RB 87..884 17..814 3990 100 Plus
CG6005-RA 1313 CG6005-RA 87..884 17..814 3990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:18:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19023030..19023442 814..402 2065 100 Minus
3R 32079331 3R 19023701..19023944 260..17 1220 100 Minus
3R 32079331 3R 19023504..19023645 401..260 710 100 Minus
Blast to na_te.dros performed on 2015-02-13 01:18:04 has no hits.

BS06164.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:56 Download gff for BS06164.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6005-PA 1..798 17..814 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:09:12 Download gff for BS06164.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6005-PA 1..798 17..814 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:32:47 Download gff for BS06164.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6005-RA 71..876 7..814 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:04:32 Download gff for BS06164.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6005-RA 79..884 7..814 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:04:32 Download gff for BS06164.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 19023701..19023952 7..260 98   Minus
3R 19023504..19023644 261..401 100 <- Minus
3R 19023030..19023442 402..814 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:32:47 Download gff for BS06164.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14849226..14849366 261..401 100 <- Minus
arm_3R 14849423..14849674 7..260 98   Minus
arm_3R 14848752..14849164 402..814 100 <- Minus

BS06164.complete Sequence

1007 bp (1007 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ635382

> BS06164.complete
GAAGTTATCAGTCGACATGGCACAAGTCGCTTTTCTGGACAACCTGCTTA
GGGAGTACCTAGTTTTTCGAGGTTTCTCCAGCACCTTGAAGGCCCTCGAC
TTGGAGCAGCGCACTGAGAAGGACCAGCACTTCCGTGCGGAACGAATTCT
GGAGCAATTCAATAATGCTGTGCAAGCGTCTGACCTTCAGGCTCTCAGGA
GTTTGTGGTTTCACCTGGACAACAACATATTTTCCAAGCTGGAGCATACG
TATGCCGTTGCTGTCAAGAAACTGGAAAACAGCCTCCTAAAATACTACCT
GGTGACCGCCTACAGCAGCAATCGACCTGAGAAGGTGTCCGAGTTCTTTA
ACAAGTTGGCGGGCGATCTGCAGCAGCAAAGCGAGTGGAAGGATTGGTTC
TACTTTCCGTTTTGCAAGAATGCCGAGGAGTCGCCCACTTTTGCCCTGTT
CTTCACCAAGCAATGGCAGGATACGTTGCTTCTGTCGCTGCGCAACTTCC
TGACCACCGTATACCAGTGCCTGCCGCAGCCCACATTCGTGCGGGCGGAG
CAGGAAGCGGCCCACATGCAGCGTCTCAGCGAAGACAACGCTGGGCTACG
CACTCGGGTACTCAACTTGCAGCAGGAGCTGAACCAGATGACCCAGCAAC
AATCAGGAACTGCGGCCGCAAGCGGAAGTTCACTTGGCGGTGGGGTCGAC
AATGGAGCCCGCAGACGCAGCGTGTATCGCCAGCAGCAGAGCCTGAGCGA
CATTCTGCCTTTCGACATCAGTCCTCCCGGACACATAGTCGATGATTTCT
GCATCATTGCTTCCGAGGCGAACAGCGTGAGCCAGGCCAGCGACGCACAG
GCGCGCAGCCTTAAGCAGTTAATCCGTAATATTGGATCGGGCAGCTCGCC
TGTGATGGGGCGCAAGGACCAGACAGCCAGTTCTCTGGGAGAAAAGTCCA
CCAAACGCAGGTCTGGCAGTCTGGGACGCAGTTGGATTTAGAAGCTTTCT
AGACCAT

BS06164.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:49:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG6005-RB 975 CG6005-PB 1..975 17..991 4875 100 Plus
CG6005-RA 975 CG6005-PA 1..975 17..991 4875 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG6005-RB 1456 CG6005-RB 87..1061 17..991 4875 100 Plus
CG6005-RA 1313 CG6005-RA 87..1061 17..991 4875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:48:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19022853..19023442 991..402 2950 100 Minus
3R 32079331 3R 19023701..19023944 260..17 1220 100 Minus
3R 32079331 3R 19023504..19023645 401..260 710 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:48:58 has no hits.

BS06164.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:17:49 Download gff for BS06164.complete
Subject Subject Range Query Range Percent Splice Strand
CG6005-RA 1..975 17..991 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:58:36 Download gff for BS06164.complete
Subject Subject Range Query Range Percent Splice Strand
CG6005-RA 71..1053 7..991 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:25:38 Download gff for BS06164.complete
Subject Subject Range Query Range Percent Splice Strand
CG6005-RA 79..1053 17..991 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:17:49 Download gff for BS06164.complete
Subject Subject Range Query Range Percent Splice Strand
CG6005-RA 71..1053 7..991 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:37 Download gff for BS06164.complete
Subject Subject Range Query Range Percent Splice Strand
CG6005-RA 87..1061 17..991 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:37 Download gff for BS06164.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19022853..19023442 402..991 100 <- Minus
3R 19023504..19023644 261..401 100 <- Minus
3R 19023701..19023944 17..260 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:25:38 Download gff for BS06164.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14848575..14849164 402..991 100 <- Minus
arm_3R 14849226..14849366 261..401 100 <- Minus
arm_3R 14849423..14849666 17..260 100   Minus

BS06164.pep Sequence

Translation from 16 to 990

> BS06164.pep
MAQVAFLDNLLREYLVFRGFSSTLKALDLEQRTEKDQHFRAERILEQFNN
AVQASDLQALRSLWFHLDNNIFSKLEHTYAVAVKKLENSLLKYYLVTAYS
SNRPEKVSEFFNKLAGDLQQQSEWKDWFYFPFCKNAEESPTFALFFTKQW
QDTLLLSLRNFLTTVYQCLPQPTFVRAEQEAAHMQRLSEDNAGLRTRVLN
LQQELNQMTQQQSGTAAASGSSLGGGVDNGARRRSVYRQQQSLSDILPFD
ISPPGHIVDDFCIIASEANSVSQASDAQARSLKQLIRNIGSGSSPVMGRK
DQTASSLGEKSTKRRSGSLGRSWI*

BS06164.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG6005-PB 324 CG6005-PB 1..324 1..324 1653 100 Plus
CG6005-PA 324 CG6005-PA 1..324 1..324 1653 100 Plus