Clone Sequence Records
BS06167.3prime Sequence
537 bp (536 high quality bases) assembled on 2005-12-03
> BS06167.3prime
ATGGTCTAGAAAGCTTTCAGCGATAGAGCCGCACCTGCTGCTTGAGATCC
TGGTCGCTTATTCGGTCCTGGAGGTTCAATTCCGCCTCCTGTTTGCGCAG
GAGCTCAAAGATGGCCGCCAGCTGCTCGCGCTCTATTCGGCGCTCCTCCT
CGATTTGGCTGGGAGTCAGGGTCTTCTCCATCTTATGCTGGAGCCTCTTG
GCCTTGAGCTGGCCCATCAGGTGGTTGTAGCTGTGCTCGGGCAGCTGTTC
CTCGATTAGCTCAACTTCGCTTTCGGTGGAGTTCTCTTCGTAGGCCTCGT
CATCGTCGGTTTCCTCCCCTTGCGGAGTCCGTGACTCGGAATCCTCCTCA
TCGCGCGGCTCGTCGGCCCCCAGGCCCTCGTCCTCCAGTTCGCCTTTGTC
CTTGAAGATGTTGGCGAAGTAGAAGGCGACCAAAACGCACAGCAGAAGGG
TGACCAGCGCTACCGAGTAGTGGCCTGGTAGTCCAAGAAAGAGAACATCC
AGCGAAGGCAGAAAATCCTGCATGTCGACTGATAACT
BS06167.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:20:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7407-PA | 507 | CG7407-RA | 1..507 | 523..17 | 2535 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 12:53:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7407-RA | 1049 | CG7407-RA | 67..579 | 528..16 | 2550 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 12:53:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21823726..21824101 | 391..16 | 1880 | 100 | Minus |
3L | 28110227 | 3L | 21823527..21823664 | 528..391 | 675 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-02-06 12:53:33 has no hits.
BS06167.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:33:02 Download gff for
BS06167.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-PA | 1..507 | 17..523 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:09:19 Download gff for
BS06167.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-PA | 1..507 | 17..523 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:47:34 Download gff for
BS06167.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-RA | 67..579 | 16..528 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:55:06 Download gff for
BS06167.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-RA | 67..579 | 16..528 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:55:06 Download gff for
BS06167.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21823527..21823663 | 392..528 | 99 | -> | Minus |
3L | 21823726..21824101 | 16..391 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:47:34 Download gff for
BS06167.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21816627..21816763 | 392..528 | 99 | -> | Minus |
arm_3L | 21816826..21817201 | 16..391 | 100 | | Minus |
BS06167.5prime Sequence
537 bp (536 high quality bases) assembled on 2005-12-03
> BS06167.5prime
GAAGTTATCAGTCGACATGCAGGATTTTCTGCCTTCGCTGGATGTTCTCT
TTCTTGGACTACCAGGCCACTACTCGGTAGCGCTGGTCACCCTTCTGCTG
TGCGTTTTGGTCGCCTTCTACTTCGCCAACATCTTCAAGGACAAAGGCGA
ACTGGAGGACGAGGGCCTGGGGGCCGACGAGCCGCGCGATGAGGAGGATT
CCGAGTCACGGACTCCGCAAGGGGAGGAAACCGACGATGACGAGGCCTAC
GAAGAGAACTCCACCGAAAGCGAAGTTGAGCTAATCGAGGAACAGCTGCC
CGAGCACAGCTACAACCACCTGATGGGCCAGCTCAAGGCCAAGAGGCTCC
AGCATAAGATGGAGAAGACCCTGACTCCCAGCCAAATCGAGGAGGAGCGC
CGAATAGAGCGCGAGCAGCTGGCGGCCATCTTTGAGCTCCTGCGCAAACA
GGAGGCGGAATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGC
AGCAGGTGCGGCTCTATCGCTGAAAGCTTTCTAGACC
BS06167.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:20:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7407-PA | 507 | CG7407-RA | 1..507 | 17..523 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:44:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7407-RA | 1049 | CG7407-RA | 67..579 | 12..524 | 2550 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:44:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21823726..21824101 | 149..524 | 1880 | 100 | Plus |
3L | 28110227 | 3L | 21823527..21823664 | 12..149 | 675 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:44:17 has no hits.
BS06167.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:33:03 Download gff for
BS06167.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-PA | 1..507 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:09:20 Download gff for
BS06167.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-PA | 1..507 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:20:30 Download gff for
BS06167.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-RA | 67..579 | 12..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:10:43 Download gff for
BS06167.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-RA | 67..579 | 12..524 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:10:43 Download gff for
BS06167.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21823527..21823663 | 12..148 | 99 | -> | Plus |
3L | 21823726..21824101 | 149..524 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:20:30 Download gff for
BS06167.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21816627..21816763 | 12..148 | 99 | -> | Plus |
arm_3L | 21816826..21817201 | 149..524 | 100 | | Plus |
BS06167.complete Sequence
539 bp (539 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635383
> BS06167.complete
GAAGTTATCAGTCGACATGCAGGATTTTCTGCCTTCGCTGGATGTTCTCT
TTCTTGGACTACCAGGCCACTACTCGGTAGCGCTGGTCACCCTTCTGCTG
TGCGTTTTGGTCGCCTTCTACTTCGCCAACATCTTCAAGGACAAAGGCGA
ACTGGAGGACGAGGGCCTGGGGGCCGACGAGCCGCGCGATGAGGAGGATT
CCGAGTCACGGACTCCGCAAGGGGAGGAAACCGACGATGACGAGGCCTAC
GAAGAGAACTCCACCGAAAGCGAAGTTGAGCTAATCGAGGAACAGCTGCC
CGAGCACAGCTACAACCACCTGATGGGCCAGCTCAAGGCCAAGAGGCTCC
AGCATAAGATGGAGAAGACCCTGACTCCCAGCCAAATCGAGGAGGAGCGC
CGAATAGAGCGCGAGCAGCTGGCGGCCATCTTTGAGCTCCTGCGCAAACA
GGAGGCGGAATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGC
AGCAGGTGCGGCTCTATCGCTGAAAGCTTTCTAGACCAT
BS06167.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:52:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7407-RA | 507 | CG7407-PA | 1..507 | 17..523 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:52:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7407-RA | 1049 | CG7407-RA | 67..579 | 12..524 | 2550 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:52:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21823726..21824101 | 149..524 | 1880 | 100 | Plus |
3L | 28110227 | 3L | 21823527..21823664 | 12..149 | 675 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:52:40 has no hits.
BS06167.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:53:28 Download gff for
BS06167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-RA | 1..507 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:29:11 Download gff for
BS06167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-RA | 63..575 | 12..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:57 Download gff for
BS06167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-RA | 72..577 | 17..522 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:53:29 Download gff for
BS06167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-RA | 63..575 | 12..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:33:28 Download gff for
BS06167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7407-RA | 72..577 | 17..522 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:28 Download gff for
BS06167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21823532..21823663 | 17..148 | 100 | -> | Plus |
3L | 21823726..21824099 | 149..522 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:57 Download gff for
BS06167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21816632..21816763 | 17..148 | 100 | -> | Plus |
arm_3L | 21816826..21817199 | 149..522 | 100 | | Plus |
BS06167.pep Sequence
Translation from 16 to 522
> BS06167.pep
MQDFLPSLDVLFLGLPGHYSVALVTLLLCVLVAFYFANIFKDKGELEDEG
LGADEPRDEEDSESRTPQGEETDDDEAYEENSTESEVELIEEQLPEHSYN
HLMGQLKAKRLQHKMEKTLTPSQIEEERRIEREQLAAIFELLRKQEAELN
LQDRISDQDLKQQVRLYR*
BS06167.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:49:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7407-PA | 168 | CG7407-PA | 1..168 | 1..168 | 852 | 100 | Plus |