Clone Sequence Records
BS06206.5prime Sequence
366 bp (365 high quality bases) assembled on 2005-12-03
> BS06206.5prime
GAAGTTATCAGTCGACATGGATGACTCACGCGAAGAAAGCCAGTTCATTG
TGGACGACGTGAGCAAGACGATTAAAGAGGCCATCGAGACGACCATCGGC
GGTAACGCCTACCAGCACGACAAGGTGAACAACTGGACCGGCCAGGTGGT
GGAGAACTGCCTGACGGTGCTCACCAAGGAGCAGAAGCCCTACAAGTACA
TTGTGACCGCCATGATCATGCAAAAGAACGGTGCTGGACTCCACACCGCC
AGCTCCTGCTACTGGAACAACGACACCGACGGATCGTGCACAGTACGCTG
GGAGAACAAGACCATGTACTGCATCGTTTCGGTCTTCGGACTGGCCGTCT
AGAAGCTTTCTAGACC
BS06206.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:20:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12363-PA | 336 | Dlc90F-RA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:07:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dlc90F-RA | 816 | CG12363-RA | 194..530 | 17..353 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:06:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18299422..18299758 | 17..353 | 1685 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:06:59 has no hits.
BS06206.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:33:54 Download gff for
BS06206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12363-PA | 1..336 | 17..352 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:10:34 Download gff for
BS06206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12363-PA | 1..336 | 17..352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 21:28:11 Download gff for
BS06206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dlc90F-RA | 189..530 | 13..353 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:54:05 Download gff for
BS06206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dlc90F-RA | 189..530 | 13..353 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:54:05 Download gff for
BS06206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18299417..18299753 | 13..348 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 21:28:11 Download gff for
BS06206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14125139..14125475 | 13..348 | 99 | <- | Plus |
BS06206.3prime Sequence
366 bp (365 high quality bases) assembled on 2005-12-03
> BS06206.3prime
ATGGTCTAGAAAGCTTCTAGACGGCCAGTCCGAAGACCGAAACGATGCAG
TACATGGTCTTGTTCTCCCAGCGTACTGTGCACGATCCGTCGGTGTCGTT
GTTCCAGTAGCAGGAGCTGGCGGTGTGGAGTCCAGCACCGTTCTTTTGCA
TGATCATGGCGGTCACAATGTACTTGTAGGGCTTCTGCTCCTTGGTGAGC
ACCGTCAGGCAGTTCTCCACCACCTGGCCGGTCCAGTTGTTCACCTTGTC
GTGCTGGTAGGCGTTACCGCCGATGGTCGTCTCGATGGCCTCTTTAATCG
TCTTGCTCACGTCGTCCACAATGAACTGGCTTTCTTCGCGTGAGTCATCC
ATGTCGACTGATAACT
BS06206.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:20:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12363-PA | 336 | Dlc90F-RA | 1..336 | 352..17 | 1680 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:04:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dlc90F-RA | 816 | CG12363-RA | 194..530 | 352..16 | 1685 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:04:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18299422..18299758 | 352..16 | 1685 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 01:04:31 has no hits.
BS06206.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:33:53 Download gff for
BS06206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12363-PA | 1..336 | 17..352 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:10:32 Download gff for
BS06206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12363-PA | 1..336 | 17..352 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:50:17 Download gff for
BS06206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dlc90F-RA | 189..530 | 16..356 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:53:56 Download gff for
BS06206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dlc90F-RA | 189..530 | 16..356 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:53:56 Download gff for
BS06206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18299417..18299753 | 21..356 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:50:17 Download gff for
BS06206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14125139..14125475 | 21..356 | 99 | <- | Minus |
BS06206.complete Sequence
368 bp (368 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635393
> BS06206.complete
GAAGTTATCAGTCGACATGGATGACTCACGCGAAGAAAGCCAGTTCATTG
TGGACGACGTGAGCAAGACGATTAAAGAGGCCATCGAGACGACCATCGGC
GGTAACGCCTACCAGCACGACAAGGTGAACAACTGGACCGGCCAGGTGGT
GGAGAACTGCCTGACGGTGCTCACCAAGGAGCAGAAGCCCTACAAGTACA
TTGTGACCGCCATGATCATGCAAAAGAACGGTGCTGGACTCCACACCGCC
AGCTCCTGCTACTGGAACAACGACACCGACGGATCGTGCACAGTACGCTG
GGAGAACAAGACCATGTACTGCATCGTTTCGGTCTTCGGACTGGCCGTCT
AGAAGCTTTCTAGACCAT
BS06206.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:08:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dlc90F-RA | 336 | CG12363-PA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:08:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dlc90F-RA | 816 | CG12363-RA | 194..530 | 17..353 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:08:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18299422..18299758 | 17..353 | 1685 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 11:08:54 has no hits.
BS06206.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:20:57 Download gff for
BS06206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dlc90F-RA | 1..336 | 17..352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:53:23 Download gff for
BS06206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dlc90F-RA | 213..554 | 13..353 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:45:20 Download gff for
BS06206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dlc90F-RA | 194..529 | 17..352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:20:57 Download gff for
BS06206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dlc90F-RA | 213..554 | 13..353 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:47 Download gff for
BS06206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dlc90F-RA | 194..529 | 17..352 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:39:47 Download gff for
BS06206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18299422..18299757 | 17..352 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:45:20 Download gff for
BS06206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14125144..14125479 | 17..352 | 100 | | Plus |
BS06206.pep Sequence
Translation from 16 to 351
> BS06206.pep
MDDSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLT
VLTKEQKPYKYIVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTM
YCIVSVFGLAV*
BS06206.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:25:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dlc90F-PA | 111 | CG12363-PA | 1..111 | 1..111 | 596 | 100 | Plus |