Clone Sequence Records
BS06225.5prime Sequence
747 bp (746 high quality bases) assembled on 2005-12-03
> BS06225.5prime
GAAGTTATCAGTCGACATGAGCATTAACTGGATAAAGATCACGGAAAGAG
CCCGTGAGGGCATCAAAATCATCAATGCCTTGCCCTACGAGACCTTTACG
ACGGTTCTGTTCTACACCCACCGGCAGATGAGTCCCAGCGTAGCATCGGC
GAGTGCCACCAGTAGTACAGTGGGCACCAGTGTGACGACCACCGGCCGGG
TGGACAGCAGCACCGAGGAGAACCCCACAAGTAACACCGAACCGGAGTAC
ACACTCGAGGAACTGGAGCGATTGGTGGGCGTACCGCGTCAGGACTTCCT
GCTGCTGATCAAGACCTTCTCCTACATCCTGCGTCGCATCTCCACGTTTA
TCATCAAGCCAAGTTTGCTGCAGCGTGAGCTGCGCGAGAAACTCCAGCTG
GAGGATGAGGCCAAGATCGATGCCATATTGCGTTTGTGGGTGCGCGAAAC
GACGCCCATTATGAACAATTTGGCCAGCAAGCGGTACGAATCAAATGTCA
TCGAAGATGTGGCCTGGAAGCTCAACATGGAGATCTCCTCGCATTGCCAG
CAGCGGGAGAAGACCCCGCTGGCCGTGCTCCAAATGAAAACGGCCGTCGG
CGAGGATATCAACATCGAAATGACACAACCGGAACTAATGGAACTGTACA
ATCAGTTCGAGAGCATCCAGGGCGAACTGGACGCCATGCTGGCCATGAAG
ACTACAGGAGCAACGGCGCCTGGCAATCAGTAGAAGCTTTCTAGACC
BS06225.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:21:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2371-PB | 717 | CG2371-RB | 1..717 | 17..733 | 3585 | 100 | Plus |
CG2371-PA | 606 | CG2371-RA | 1..606 | 128..733 | 3030 | 100 | Plus |
CG2371-PC | 606 | CG2371-RC | 1..606 | 128..733 | 3030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:27:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2371-RB | 1155 | CG2371-RB | 118..834 | 17..733 | 3585 | 100 | Plus |
CG2371-RC | 1246 | CG2371-RC | 239..925 | 47..733 | 3435 | 100 | Plus |
CG2371-RA | 1076 | CG2371-RA | 148..755 | 126..733 | 3040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:27:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11677665..11678351 | 733..47 | 3435 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:27:17 has no hits.
BS06225.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:34:34 Download gff for
BS06225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-PB | 1..717 | 17..733 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:11:28 Download gff for
BS06225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-PB | 1..717 | 17..733 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:19:14 Download gff for
BS06225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-RB | 109..834 | 6..733 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:10:47 Download gff for
BS06225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-RB | 109..834 | 6..733 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:10:47 Download gff for
BS06225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11677665..11678349 | 49..733 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:19:14 Download gff for
BS06225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11571698..11572382 | 49..733 | 100 | <- | Minus |
BS06225.3prime Sequence
747 bp (746 high quality bases) assembled on 2005-12-03
> BS06225.3prime
ATGGTCTAGAAAGCTTCTACTGATTGCCAGGCGCCGTTGCTCCTGTAGTC
TTCATGGCCAGCATGGCGTCCAGTTCGCCCTGGATGCTCTCGAACTGATT
GTACAGTTCCATTAGTTCCGGTTGTGTCATTTCGATGTTGATATCCTCGC
CGACGGCCGTTTTCATTTGGAGCACGGCCAGCGGGGTCTTCTCCCGCTGC
TGGCAATGCGAGGAGATCTCCATGTTGAGCTTCCAGGCCACATCTTCGAT
GACATTTGATTCGTACCGCTTGCTGGCCAAATTGTTCATAATGGGCGTCG
TTTCGCGCACCCACAAACGCAATATGGCATCGATCTTGGCCTCATCCTCC
AGCTGGAGTTTCTCGCGCAGCTCACGCTGCAGCAAACTTGGCTTGATGAT
AAACGTGGAGATGCGACGCAGGATGTAGGAGAAGGTCTTGATCAGCAGCA
GGAAGTCCTGACGCGGTACGCCCACCAATCGCTCCAGTTCCTCGAGTGTG
TACTCCGGTTCGGTGTTACTTGTGGGGTTCTCCTCGGTGCTGCTGTCCAC
CCGGCCGGTGGTCGTCACACTGGTGCCCACTGTACTACTGGTGGCACTCG
CCGATGCTACGCTGGGACTCATCTGCCGGTGGGTGTAGAACAGAACCGTC
GTAAAGGTCTCGTAGGGCAAGGCATTGATGATTTTGATGCCCTCACGGGC
TCTTTCCGTGATCTTTATCCAGTTAATGCTCATGTCGACTGATAACT
BS06225.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:21:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2371-PB | 717 | CG2371-RB | 1..717 | 733..17 | 3585 | 100 | Minus |
CG2371-PA | 606 | CG2371-RA | 1..606 | 622..17 | 3030 | 100 | Minus |
CG2371-PC | 606 | CG2371-RC | 1..606 | 622..17 | 3030 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:05:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2371-RB | 1155 | CG2371-RB | 118..834 | 733..17 | 3585 | 100 | Minus |
CG2371-RC | 1246 | CG2371-RC | 239..925 | 703..17 | 3435 | 100 | Minus |
CG2371-RA | 1076 | CG2371-RA | 148..755 | 624..17 | 3040 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:05:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11677665..11678351 | 17..703 | 3435 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:05:13 has no hits.
BS06225.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:34:33 Download gff for
BS06225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-PB | 1..717 | 17..733 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:11:26 Download gff for
BS06225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-PB | 1..717 | 17..733 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:50:27 Download gff for
BS06225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-RB | 109..834 | 17..744 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:56:39 Download gff for
BS06225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-RB | 109..834 | 17..744 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:56:39 Download gff for
BS06225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11677665..11678349 | 17..701 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:50:27 Download gff for
BS06225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11571698..11572382 | 17..701 | 100 | <- | Plus |
BS06225.complete Sequence
749 bp (749 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635402
> BS06225.complete
GAAGTTATCAGTCGACATGAGCATTAACTGGATAAAGATCACGGAAAGAG
CCCGTGAGGGCATCAAAATCATCAATGCCTTGCCCTACGAGACCTTTACG
ACGGTTCTGTTCTACACCCACCGGCAGATGAGTCCCAGCGTAGCATCGGC
GAGTGCCACCAGTAGTACAGTGGGCACCAGTGTGACGACCACCGGCCGGG
TGGACAGCAGCACCGAGGAGAACCCCACAAGTAACACCGAACCGGAGTAC
ACACTCGAGGAACTGGAGCGATTGGTGGGCGTACCGCGTCAGGACTTCCT
GCTGCTGATCAAGACCTTCTCCTACATCCTGCGTCGCATCTCCACGTTTA
TCATCAAGCCAAGTTTGCTGCAGCGTGAGCTGCGCGAGAAACTCCAGCTG
GAGGATGAGGCCAAGATCGATGCCATATTGCGTTTGTGGGTGCGCGAAAC
GACGCCCATTATGAACAATTTGGCCAGCAAGCGGTACGAATCAAATGTCA
TCGAAGATGTGGCCTGGAAGCTCAACATGGAGATCTCCTCGCATTGCCAG
CAGCGGGAGAAGACCCCGCTGGCCGTGCTCCAAATGAAAACGGCCGTCGG
CGAGGATATCAACATCGAAATGACACAACCGGAACTAATGGAACTGTACA
ATCAGTTCGAGAGCATCCAGGGCGAACTGGACGCCATGCTGGCCATGAAG
ACTACAGGAGCAACGGCGCCTGGCAATCAGTAGAAGCTTTCTAGACCAT
BS06225.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:55:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2371-RB | 717 | CG2371-PB | 1..717 | 17..733 | 3585 | 100 | Plus |
CG2371-RC | 606 | CG2371-PC | 1..606 | 128..733 | 3030 | 100 | Plus |
CG2371-RA | 606 | CG2371-PA | 1..606 | 128..733 | 3030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:55:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2371-RB | 1155 | CG2371-RB | 118..834 | 17..733 | 3585 | 100 | Plus |
CG2371-RC | 1246 | CG2371-RC | 239..925 | 47..733 | 3435 | 100 | Plus |
CG2371-RA | 1076 | CG2371-RA | 148..755 | 126..733 | 3040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:55:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11677665..11678351 | 733..47 | 3435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:55:22 has no hits.
BS06225.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:17:12 Download gff for
BS06225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-RB | 1..717 | 17..733 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:57:47 Download gff for
BS06225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-RB | 109..834 | 6..733 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:28:38 Download gff for
BS06225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-RB | 118..834 | 17..733 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:17:13 Download gff for
BS06225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-RB | 109..834 | 6..733 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:59:08 Download gff for
BS06225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2371-RB | 118..834 | 17..733 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:59:08 Download gff for
BS06225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11677665..11678349 | 49..733 | 100 | <- | Minus |
X | 11678403..11678434 | 17..48 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:28:38 Download gff for
BS06225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11571698..11572382 | 49..733 | 100 | <- | Minus |
arm_X | 11572436..11572467 | 17..48 | 100 | | Minus |
BS06225.pep Sequence
Translation from 16 to 732
> BS06225.pep
MSINWIKITERAREGIKIINALPYETFTTVLFYTHRQMSPSVASASATSS
TVGTSVTTTGRVDSSTEENPTSNTEPEYTLEELERLVGVPRQDFLLLIKT
FSYILRRISTFIIKPSLLQRELREKLQLEDEAKIDAILRLWVRETTPIMN
NLASKRYESNVIEDVAWKLNMEISSHCQQREKTPLAVLQMKTAVGEDINI
EMTQPELMELYNQFESIQGELDAMLAMKTTGATAPGNQ*
BS06225.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:04:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2371-PB | 238 | CG2371-PB | 1..238 | 1..238 | 1193 | 100 | Plus |
CG2371-PC | 201 | CG2371-PC | 1..201 | 38..238 | 1000 | 100 | Plus |
CG2371-PA | 201 | CG2371-PA | 1..201 | 38..238 | 1000 | 100 | Plus |