Clone Sequence Records
BS06257.3prime Sequence
825 bp (824 high quality bases) assembled on 2005-12-03
> BS06257.3prime
ATGGTCTAGAAAGCTTTTAGTTGTTTGAAAGCATGGGTGGCGGTGGATGA
ACGCCATTGAACATGGGATGCATAGCAGGACGTGGCGGTCCCGGCATGGG
GAATCCGCCTGGGGGGCCTAGTGCCCTATGTAGATTCGGCGGCGGTGGCG
GCAGGATCTTAGGTTCGAACTTGAAGGCGAACTGAAGGAAGAACTGCTTG
GTGTCACGGTTCCAGTGCGTCCAGAACTTGCCCTCACTCTTCTCCACTTC
GCGGGACGGCACCTTGAACCCTATGGTCTCGTACGGCTCGGCGGCAAAGA
GAAGGTACTGCCACTTGCGGTCTGGCGGCTCGATCTTTTGCTCGTAGGCG
GACATGAAGCGGTGACGCGGAACAATGGACTCCGTGATTTCCGGGTAGTC
CACCTGAAAGAGCAACGACTGCTGGCCGTTGCTGAGTTCACGCTGCTTGG
TCACCCGGTAGCCGGGTCGTCCAATCTTGACGAACTTCTTCGGTTCCACG
CGGGGCTTCTCGGGCGCCAGCAGCGAAGAGGGTGCCTCCTTTGCCTCCTT
GGCGGCTCTTCTTGCCAGATTATCCTGATGCTTCTTGCCCTGCGTGTGGG
CCAAATAGCTGCCCTCGTTGTTGTGCAGCGTCAGGCAGAGTTTGCACTCG
TAGGAGCCCAGATGGTTCTTCATGAAGTACGGATCCTTGTTCAGATCGAT
TGTCTCCAGGGCCAGTTGACGCAGTCGCTCCTTGCGGTCGCGGTTCGTCT
CCGACCAGGAGGCTACGCCTCCGCTGCCGGTCTTGCCGCCGGCGCGGTTT
TGGAAGTCCATGTCGACTGATAACT
BS06257.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:21:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-PA | 795 | CG10754-RA | 1..795 | 811..17 | 3975 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:19:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-RA | 992 | CG10754-RA | 113..907 | 811..17 | 3975 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:19:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12813113..12813907 | 17..811 | 3975 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:19:16 has no hits.
BS06257.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:35:29 Download gff for
BS06257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-PA | 1..795 | 17..811 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:12:39 Download gff for
BS06257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-PA | 1..795 | 17..811 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:49:54 Download gff for
BS06257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..907 | 17..811 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:24:55 Download gff for
BS06257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..907 | 17..811 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:24:55 Download gff for
BS06257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12813113..12813907 | 17..811 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:49:54 Download gff for
BS06257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12806213..12807007 | 17..811 | 100 | | Plus |
BS06257.5prime Sequence
825 bp (824 high quality bases) assembled on 2005-12-03
> BS06257.5prime
GAAGTTATCAGTCGACATGGACTTCCAAAACCGCGCCGGCGGCAAGACCG
GCAGCGGAGGCGTAGCCTCCTGGTCGGAGACGAACCGCGACCGCAAGGAG
CGACTGCGTCAACTGGCCCTGGAGACAATCGATCTGAACAAGGATCCGTA
CTTCATGAAGAACCATCTGGGCTCCTACGAGTGCAAACTCTGCCTGACGC
TGCACAACAACGAGGGCAGCTATTTGGCCCACACGCAGGGCAAGAAGCAT
CAGGATAATCTGGCAAGAAGAGCCGCCAAGGAGGCAAAGGAGGCACCCTC
TTCGCTGCTGGCGCCCGAGAAGCCCCGCGTGGAACCGAAGAAGTTCGTCA
AGATTGGACGACCCGGCTACCGGGTGACCAAGCAGCGTGAACTCAGCAAC
GGCCAGCAGTCGTTGCTCTTTCAGGTGGACTACCCGGAAATCACGGAGTC
CATTGTTCCGCGTCACCGCTTCATGTCCGCCTACGAGCAAAAGATCGAGC
CGCCAGACCGCAAGTGGCAGTACCTTCTCTTTGCCGCCGAGCCGTACGAG
ACCATAGGGTTCAAGGTGCCGTCCCGCGAAGTGGAGAAGAGTGAGGGCAA
GTTCTGGACGCACTGGAACCGTGACACCAAGCAGTTCTTCCTTCAGTTCG
CCTTCAAGTTCGAACCTAAGATCCTGCCGCCACCGCCGCCGAATCTACAT
AGGGCACTAGGCCCCCCAGGCGGATTCCCCATGCCGGGACCGCCACGTCC
TGCTATGCATCCCATGTTCAATGGCGTTCATCCACCGCCACCCATGCTTT
CAAACAACTAAAAGCTTTCTAGACC
BS06257.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:21:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-PA | 795 | CG10754-RA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-RA | 992 | CG10754-RA | 113..907 | 17..811 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12813113..12813907 | 811..17 | 3975 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 20:00:35 has no hits.
BS06257.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:35:30 Download gff for
BS06257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-PA | 1..795 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:12:40 Download gff for
BS06257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-PA | 1..795 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:33:30 Download gff for
BS06257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..907 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:29:03 Download gff for
BS06257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..907 | 17..811 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:29:03 Download gff for
BS06257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12813113..12813907 | 17..811 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:33:30 Download gff for
BS06257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12806213..12807007 | 17..811 | 100 | | Minus |
BS06257.complete Sequence
827 bp (827 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635419
> BS06257.complete
GAAGTTATCAGTCGACATGGACTTCCAAAACCGCGCCGGCGGCAAGACCG
GCAGCGGAGGCGTAGCCTCCTGGTCGGAGACGAACCGCGACCGCAAGGAG
CGACTGCGTCAACTGGCCCTGGAGACAATCGATCTGAACAAGGATCCGTA
CTTCATGAAGAACCATCTGGGCTCCTACGAGTGCAAACTCTGCCTGACGC
TGCACAACAACGAGGGCAGCTATTTGGCCCACACGCAGGGCAAGAAGCAT
CAGGATAATCTGGCAAGAAGAGCCGCCAAGGAGGCAAAGGAGGCACCCTC
TTCGCTGCTGGCGCCCGAGAAGCCCCGCGTGGAACCGAAGAAGTTCGTCA
AGATTGGACGACCCGGCTACCGGGTGACCAAGCAGCGTGAACTCAGCAAC
GGCCAGCAGTCGTTGCTCTTTCAGGTGGACTACCCGGAAATCACGGAGTC
CATTGTTCCGCGTCACCGCTTCATGTCCGCCTACGAGCAAAAGATCGAGC
CGCCAGACCGCAAGTGGCAGTACCTTCTCTTTGCCGCCGAGCCGTACGAG
ACCATAGGGTTCAAGGTGCCGTCCCGCGAAGTGGAGAAGAGTGAGGGCAA
GTTCTGGACGCACTGGAACCGTGACACCAAGCAGTTCTTCCTTCAGTTCG
CCTTCAAGTTCGAACCTAAGATCCTGCCGCCACCGCCGCCGAATCTACAT
AGGGCACTAGGCCCCCCAGGCGGATTCCCCATGCCGGGACCGCCACGTCC
TGCTATGCATCCCATGTTCAATGGCGTTCATCCACCGCCACCCATGCTTT
CAAACAACTAAAAGCTTTCTAGACCAT
BS06257.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:15:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-RA | 795 | CG10754-PA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:16:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-RA | 992 | CG10754-RA | 113..907 | 17..811 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:15:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12813113..12813907 | 811..17 | 3975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:15:57 has no hits.
BS06257.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:17:11 Download gff for
BS06257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 1..795 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:57:46 Download gff for
BS06257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 97..891 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:21:09 Download gff for
BS06257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..905 | 17..809 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:17:11 Download gff for
BS06257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 97..891 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:51 Download gff for
BS06257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..905 | 17..809 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:51 Download gff for
BS06257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12813115..12813907 | 17..809 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:21:09 Download gff for
BS06257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12806215..12807007 | 17..809 | 100 | | Minus |
BS06257.pep Sequence
Translation from 16 to 810
> BS06257.pep
MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALETIDLNKDPYFMKNH
LGSYECKLCLTLHNNEGSYLAHTQGKKHQDNLARRAAKEAKEAPSSLLAP
EKPRVEPKKFVKIGRPGYRVTKQRELSNGQQSLLFQVDYPEITESIVPRH
RFMSAYEQKIEPPDRKWQYLLFAAEPYETIGFKVPSREVEKSEGKFWTHW
NRDTKQFFLQFAFKFEPKILPPPPPNLHRALGPPGGFPMPGPPRPAMHPM
FNGVHPPPPMLSNN*
BS06257.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:04:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-PA | 264 | CG10754-PA | 1..264 | 1..264 | 1441 | 100 | Plus |