Clone BS06263 Report

Search the DGRC for BS06263

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:62
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptGstZ1-RA
Protein status:BS06263.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06263.3prime Sequence

771 bp (770 high quality bases) assembled on 2005-12-03

> BS06263.3prime
ATGGTCTAGAAAGCTTTTATTTTTTTGCGAATTCAGGTGGACAATCTGGC
TGGGTACTGGGATGAGTGGCTTTGAAGACATCAAGTTCTTGTAGTTCCTG
ATTCAAGCGTACTATGGTGGGATATGGGGTCAGGTCAGCTTTGTATCTCC
TGGCATTGCGCACCTGAGGTACCAGGCAAATATCAGCCATGCTGAGCTCA
TCTCCCACACAGAATTTGCCCGCCGAATGGGAAAGAACCTTTTCGAGACC
CTGAAATCCTCGAGAAATCCAGTGTTGTGCCCATTGCAGACTCTGATCCT
TGCCTATATGATCTAGGACAGATACATTTTGCAGTGGCTGGATGCCCGAG
CAAATGAGCTCCACAATTTCACGGATCTTTGCTCTTTTAACCGGATCTTG
GGGCAGAAGTGCTGGCTGAGGTCGAGTTTCCTCCAGGTAGTGGATAATAG
CCACCGAGTCGCACAAGGTATGGCCATCAATCTTCAACGAGGGAACCTTT
TGCATCGGATTGACTTCCCTATATTCATCCGTATAGGCATGTCCGCTAAC
TGTTTTTAGCAAAGAAGTCGGCTTAATGTCATAATCAATCTTCTTTATTG
CCAGCGCAACGCGAACTCTCCAAGAACACGAACTAGGCCAATAGGAATAC
AGTATAGGCTTTGTTGCCAAATGTCGGAACAAGGGCTTAGACCAAGAAGA
TCTGTACAGTCCGGCCAAATGGATACCTCTGTGGGTCAATTGGGTAGCAG
AAGCCATGTCGACTGATAACT

BS06263.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:21:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9362-PA 741 CG9362-RA 1..741 757..17 3705 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:14:00
Subject Length Description Subject Range Query Range Score Percent Strand
GstZ1-RA 913 CG9362-RA 102..842 757..17 3705 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:13:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9455781..9456112 147..478 1660 100 Plus
3R 32079331 3R 9456166..9456445 478..757 1400 100 Plus
3R 32079331 3R 9455588..9455719 17..148 660 100 Plus
Blast to na_te.dros performed on 2015-02-10 19:14:00 has no hits.

BS06263.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:35:38 Download gff for BS06263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9362-PA 1..741 17..757 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:12:51 Download gff for BS06263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9362-PA 1..741 17..757 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:15:58 Download gff for BS06263.3prime
Subject Subject Range Query Range Percent Splice Strand
GstZ1-RA 97..842 17..765 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:33:20 Download gff for BS06263.3prime
Subject Subject Range Query Range Percent Splice Strand
GstZ1-RA 97..842 17..765 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:33:20 Download gff for BS06263.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 9455588..9455717 17..146 100 <- Plus
3R 9455781..9456111 147..477 100 <- Plus
3R 9456166..9456450 478..765 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:15:58 Download gff for BS06263.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5281310..5281439 17..146 100 <- Plus
arm_3R 5281503..5281833 147..477 100 <- Plus
arm_3R 5281888..5282172 478..765 98   Plus

BS06263.5prime Sequence

771 bp (744 high quality bases) assembled on 2005-12-03

> BS06263.5prime
GAAGTTATCAGTCGACATGGCTTCTGCTACCCAATTGACCCACAGAGGTA
TCCATTTGGCCGGACTGTACAGATCTTCTTGGTCTAAGCCCTTGTTCCGA
CATTTGGCAACAAAGCCTATACTGTATTCCTATTGGCCTAGTTCGTGTTC
TTGGAGAGTTCGCGTTGCGCTGGCAATAAAGAAGATTGATTATGACATTA
AGCCGACTTCTTTGCTAAAAACAGTTAGCGGACATGCCTATACGGATGAA
TATAGGGAAGTCAATCCGATGCAAAAGGTTCCCTCGTTGAAGATTGATGG
CCATACCTTGTGCGACTCGGTGGCTATTATCCACTACCTGGAGGAAACTC
GACCTCAGCCAGCACTTCTGCCCCAAGATCCGGTTAAAAGAGCAAAGATC
CGTGAAATTGTGGAGCTCATTTGCTCGGGCATCCAGCCACTGCAAAATGT
ATCTGTCCTAGATCATATAGGCAAGGATCAGAGTCTGCAATGGGCACAAC
ACTGGATTTCTCGAGGATTTCAGGGTCTCGAAAAGGTTCTTTCCCATTCG
GCGGGCAAATTCTGTGTGGGAGATGAGCTCAGCATGGCTGATATTTGCCT
GGTACCTCAGGTGCGCAATGCCAGGAGATACAAAGCTGACCTGACCCCAT
ATCCCACCATAGTACGCTTGAATCAGGAACTACAAGAACTTGATGTCTTC
AAAGCCACTCATCCCAGTACCCAGCCAGATTGTCCACCTGAATTCGCAAA
AAAATAAAAGCTTTCTAGACC

BS06263.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:21:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG9362-PA 741 CG9362-RA 1..741 17..757 3705 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:06:45
Subject Length Description Subject Range Query Range Score Percent Strand
GstZ1-RA 913 CG9362-RA 102..842 17..757 3705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9455781..9456112 627..296 1660 100 Minus
3R 32079331 3R 9456166..9456445 296..17 1400 100 Minus
3R 32079331 3R 9455588..9455719 757..626 660 100 Minus
Blast to na_te.dros performed on 2015-02-12 13:06:43 has no hits.

BS06263.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:35:41 Download gff for BS06263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9362-PA 1..741 17..757 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:12:53 Download gff for BS06263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9362-PA 1..741 17..757 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:07:47 Download gff for BS06263.5prime
Subject Subject Range Query Range Percent Splice Strand
GstZ1-RA 97..842 9..757 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:28:27 Download gff for BS06263.5prime
Subject Subject Range Query Range Percent Splice Strand
GstZ1-RA 97..842 9..757 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:28:27 Download gff for BS06263.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 9455588..9455717 628..757 100 <- Minus
3R 9455781..9456111 297..627 100 <- Minus
3R 9456166..9456450 9..296 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:07:47 Download gff for BS06263.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5281310..5281439 628..757 100 <- Minus
arm_3R 5281503..5281833 297..627 100 <- Minus
arm_3R 5281888..5282172 9..296 98   Minus

BS06263.complete Sequence

773 bp (773 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ635421

> BS06263.complete
GAAGTTATCAGTCGACATGGCTTCTGCTACCCAATTGACCCACAGAGGTA
TCCATTTGGCCGGACTGTACAGATCTTCTTGGTCTAAGCCCTTGTTCCGA
CATTTGGCAACAAAGCCTATACTGTATTCCTATTGGCCTAGTTCGTGTTC
TTGGAGAGTTCGCGTTGCGCTGGCAATAAAGAAGATTGATTATGACATTA
AGCCGACTTCTTTGCTAAAAACAGTTAGCGGACATGCCTATACGGATGAA
TATAGGGAAGTCAATCCGATGCAAAAGGTTCCCTCGTTGAAGATTGATGG
CCATACCTTGTGCGACTCGGTGGCTATTATCCACTACCTGGAGGAAACTC
GACCTCAGCCAGCACTTCTGCCCCAAGATCCGGTTAAAAGAGCAAAGATC
CGTGAAATTGTGGAGCTCATTTGCTCGGGCATCCAGCCACTGCAAAATGT
ATCTGTCCTAGATCATATAGGCAAGGATCAGAGTCTGCAATGGGCACAAC
ACTGGATTTCTCGAGGATTTCAGGGTCTCGAAAAGGTTCTTTCCCATTCG
GCGGGCAAATTCTGTGTGGGAGATGAGCTCAGCATGGCTGATATTTGCCT
GGTACCTCAGGTGCGCAATGCCAGGAGATACAAAGCTGACCTGACCCCAT
ATCCCACCATAGTACGCTTGAATCAGGAACTACAAGAACTTGATGTCTTC
AAAGCCACTCATCCCAGTACCCAGCCAGATTGTCCACCTGAATTCGCAAA
AAAATAAAAGCTTTCTAGACCAT

BS06263.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:37:14
Subject Length Description Subject Range Query Range Score Percent Strand
GstZ1-RA 741 CG9362-PA 1..741 17..757 3705 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:37:15
Subject Length Description Subject Range Query Range Score Percent Strand
GstZ1-RA 913 CG9362-RA 102..842 17..757 3705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:37:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9455781..9456112 627..296 1660 100 Minus
3R 32079331 3R 9456166..9456445 296..17 1400 100 Minus
3R 32079331 3R 9455588..9455719 757..626 660 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:37:14 has no hits.

BS06263.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:43:10 Download gff for BS06263.complete
Subject Subject Range Query Range Percent Splice Strand
CG9362-RA 1..741 17..757 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:30:07 Download gff for BS06263.complete
Subject Subject Range Query Range Percent Splice Strand
CG9362-RA 93..838 9..757 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:46 Download gff for BS06263.complete
Subject Subject Range Query Range Percent Splice Strand
GstZ1-RA 102..832 17..747 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:43:10 Download gff for BS06263.complete
Subject Subject Range Query Range Percent Splice Strand
CG9362-RA 93..838 9..757 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:16 Download gff for BS06263.complete
Subject Subject Range Query Range Percent Splice Strand
GstZ1-RA 102..832 17..747 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:16 Download gff for BS06263.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9456166..9456445 17..296 100   Minus
3R 9455598..9455717 628..747 100 <- Minus
3R 9455781..9456111 297..627 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:46 Download gff for BS06263.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5281320..5281439 628..747 100 <- Minus
arm_3R 5281503..5281833 297..627 100 <- Minus
arm_3R 5281888..5282167 17..296 100   Minus

BS06263.pep Sequence

Translation from 16 to 756

> BS06263.pep
MASATQLTHRGIHLAGLYRSSWSKPLFRHLATKPILYSYWPSSCSWRVRV
ALAIKKIDYDIKPTSLLKTVSGHAYTDEYREVNPMQKVPSLKIDGHTLCD
SVAIIHYLEETRPQPALLPQDPVKRAKIREIVELICSGIQPLQNVSVLDH
IGKDQSLQWAQHWISRGFQGLEKVLSHSAGKFCVGDELSMADICLVPQVR
NARRYKADLTPYPTIVRLNQELQELDVFKATHPSTQPDCPPEFAKK*

BS06263.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:23
Subject Length Description Subject Range Query Range Score Percent Strand
GstZ1-PA 246 CG9362-PA 1..246 1..246 1305 100 Plus
GstZ2-PB 220 CG9363-PB 8..220 33..246 794 67.3 Plus
GstZ2-PA 227 CG9363-PA 15..227 33..246 790 66.8 Plus
GstZ2-PC 215 CG9363-PC 4..215 34..246 789 67.1 Plus
GstE6-PA 222 CG17530-PA 3..199 33..229 151 29.4 Plus