Clone Sequence Records
BS06286.3prime Sequence
588 bp (587 high quality bases) assembled on 2005-12-03
> BS06286.3prime
ATGGTCTAGAAAGCTTCTACTGCCGTGTGGGTGGCAAGGTCGCCTCGCTG
CGTGTTGGTTCGCATAGGACGATGGTTTCGTTGCGATTGTTGTTGCCGCT
GCTGTTGTTGTTGCTGCTACTGGTCGTGGTCGACATGGCCCGCGGGTGCC
AATTGTCAAGGTCCTCGTCGCCGTGCTCCTTGGCCCTGTGGTAGTTCTCC
AATTCGCTGGCATACTTGCTGCTGGTGATACCAAGCAGGTGGGCCAGCCC
ACCGCCCACATAGTCGATGCCGGCCAGGAATCGGTTGCCCATCCTGCTGG
CCTTGTAACGCAGGCGTGGTCCCAGCGGCATTTCGCTCTCGTTTAAATGG
ACGTCGTAGCATTTGTCGCCCATTTCCGCATCCGCCTCGTCCTCGCTGCC
CGAGGACAACTCCTCCATGACGCCGTCGCTAAAGTACAGCATGCGCTTGT
TGGACTGCAGTTCAAGGGCGCTCACATTGTCCGTCTCGGATGCACTTGCT
CCACTCGCAGATGCCAGTTCCAATCCTCCAGCTGCACTGCGTACTTCGCC
ACTCTTGTTCCTCTCCGCTGACATGTCGACTGATAACT
BS06286.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:22:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8300-PA | 558 | CG8300-RA | 1..558 | 574..17 | 2790 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 13:24:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8300-RA | 1060 | CG8300-RA | 271..829 | 575..17 | 2795 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 13:24:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7105792..7106114 | 339..17 | 1615 | 100 | Minus |
X | 23542271 | X | 7105155..7105392 | 575..338 | 1190 | 100 | Minus |
Blast to na_te.dros performed 2015-02-03 13:24:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2449..2562 | 130..20 | 175 | 64 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2682..2914 | 241..18 | 169 | 57.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2524..2682 | 229..71 | 166 | 60.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6881 | 231..71 | 158 | 60.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6884 | 130..13 | 154 | 63.3 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1056..1107 | 133..82 | 152 | 76.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1540..1605 | 118..53 | 150 | 69.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2421 | 124..13 | 149 | 63.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6815 | 130..47 | 149 | 67.1 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1104..1163 | 130..71 | 147 | 71.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6819..6881 | 130..68 | 144 | 69.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2395 | 132..53 | 143 | 67.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6750..6830 | 130..51 | 141 | 65.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2264..2452 | 232..53 | 139 | 57.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..6772 | 130..87 | 139 | 79.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2788..2838 | 124..74 | 138 | 74.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6796 | 118..45 | 135 | 68 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1549..1612 | 130..71 | 130 | 71.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6751 | 119..87 | 129 | 87.9 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1110..1178 | 121..53 | 129 | 65.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2577..2626 | 136..88 | 121 | 74 | Minus |
TART-A | 13424 | TART-A 13424bp | 897..942 | 134..90 | 119 | 76.1 | Minus |
TART-A | 13424 | TART-A 13424bp | 12075..12120 | 134..90 | 119 | 76.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1591 | 116..39 | 118 | 68.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2438..2475 | 117..80 | 118 | 78.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1546..1599 | 130..77 | 117 | 68.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5649..5720 | 113..39 | 114 | 68.4 | Minus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 529..580 | 115..62 | 112 | 70.4 | Minus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 979..1011 | 130..98 | 111 | 81.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6769..6920 | 231..80 | 110 | 55.8 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 151..200 | 123..77 | 108 | 72 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9181..9230 | 123..77 | 108 | 72 | Minus |
BS06286.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:36:24 Download gff for
BS06286.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-PA | 1..558 | 17..574 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:13:56 Download gff for
BS06286.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-PA | 1..558 | 17..574 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:59:59 Download gff for
BS06286.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-RA | 258..831 | 13..588 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:49:06 Download gff for
BS06286.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-RA | 258..831 | 13..588 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:49:06 Download gff for
BS06286.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7105142..7105392 | 338..588 | 98 | -> | Minus |
X | 7105794..7106116 | 13..337 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:59:59 Download gff for
BS06286.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6999175..6999425 | 338..588 | 98 | -> | Minus |
arm_X | 6999827..7000149 | 13..337 | 99 | | Minus |
BS06286.5prime Sequence
588 bp (587 high quality bases) assembled on 2005-12-03
> BS06286.5prime
GAAGTTATCAGTCGACATGTCAGCGGAGAGGAACAAGAGTGGCGAAGTAC
GCAGTGCAGCTGGAGGATTGGAACTGGCATCTGCGAGTGGAGCAAGTGCA
TCCGAGACGGACAATGTGAGCGCCCTTGAACTGCAGTCCAACAAGCGCAT
GCTGTACTTTAGCGACGGCGTCATGGAGGAGTTGTCCTCGGGCAGCGAGG
ACGAGGCGGATGCGGAAATGGGCGACAAATGCTACGACGTCCATTTAAAC
GAGAGCGAAATGCCGCTGGGACCACGCCTGCGTTACAAGGCCAGCAGGAT
GGGCAACCGATTCCTGGCCGGCATCGACTATGTGGGCGGTGGGCTGGCCC
ACCTGCTTGGTATCACCAGCAGCAAGTATGCCAGCGAATTGGAGAACTAC
CACAGGGCCAAGGAGCACGGCGACGAGGACCTTGACAATTGGCACCCGCG
GGCCATGTCGACCACGACCAGTAGCAGCAACAACAACAGCAGCGGCAACA
ACAATCGCAACGAAACCATCGTCCTATGCGAACCAACACGCAGCGAGGCG
ACCTTGCCACCCACACGGCAGTAGAAGCTTTCTAGACC
BS06286.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:22:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8300-PA | 558 | CG8300-RA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:06:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8300-RA | 1060 | CG8300-RA | 271..829 | 16..574 | 2795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:06:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7105792..7106114 | 252..574 | 1615 | 100 | Plus |
X | 23542271 | X | 7105155..7105392 | 16..253 | 1190 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 16:06:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2449..2562 | 461..571 | 175 | 64 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2682..2914 | 350..573 | 169 | 57.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2524..2682 | 362..520 | 166 | 60.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6881 | 360..520 | 158 | 60.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6884 | 461..578 | 154 | 63.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1056..1107 | 458..509 | 152 | 76.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1540..1605 | 473..538 | 150 | 69.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2421 | 467..578 | 149 | 63.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6815 | 461..544 | 149 | 67.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1104..1163 | 461..520 | 147 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6819..6881 | 461..523 | 144 | 69.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2395 | 459..538 | 143 | 67.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6750..6830 | 461..540 | 141 | 65.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2264..2452 | 359..538 | 139 | 57.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..6772 | 461..504 | 139 | 79.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2788..2838 | 467..517 | 138 | 74.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6796 | 473..546 | 135 | 68 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1549..1612 | 461..520 | 130 | 71.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6751 | 472..504 | 129 | 87.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1110..1178 | 470..538 | 129 | 65.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2577..2626 | 455..503 | 121 | 74 | Plus |
TART-A | 13424 | TART-A 13424bp | 897..942 | 457..501 | 119 | 76.1 | Plus |
TART-A | 13424 | TART-A 13424bp | 12075..12120 | 457..501 | 119 | 76.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1591 | 475..552 | 118 | 68.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2438..2475 | 474..511 | 118 | 78.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1546..1599 | 461..514 | 117 | 68.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5649..5720 | 478..552 | 114 | 68.4 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 529..580 | 476..529 | 112 | 70.4 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 979..1011 | 461..493 | 111 | 81.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6769..6920 | 360..511 | 110 | 55.8 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 151..200 | 468..514 | 108 | 72 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9181..9230 | 468..514 | 108 | 72 | Plus |
BS06286.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:36:25 Download gff for
BS06286.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-PA | 1..558 | 17..574 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:13:57 Download gff for
BS06286.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-PA | 1..558 | 17..574 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:34:21 Download gff for
BS06286.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-RA | 258..831 | 3..578 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:53:39 Download gff for
BS06286.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-RA | 258..831 | 3..578 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:53:39 Download gff for
BS06286.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7105142..7105392 | 3..253 | 98 | -> | Plus |
X | 7105794..7106116 | 254..578 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:34:21 Download gff for
BS06286.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6999175..6999425 | 3..253 | 98 | -> | Plus |
arm_X | 6999827..7000149 | 254..578 | 99 | | Plus |
BS06286.complete Sequence
590 bp (590 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635431
> BS06286.complete
GAAGTTATCAGTCGACATGTCAGCGGAGAGGAACAAGAGTGGCGAAGTAC
GCAGTGCAGCTGGAGGATTGGAACTGGCATCTGCGAGTGGAGCAAGTGCA
TCCGAGACGGACAATGTGAGCGCCCTTGAACTGCAGTCCAACAAGCGCAT
GCTGTACTTTAGCGACGGCGTCATGGAGGAGTTGTCCTCGGGCAGCGAGG
ACGAGGCGGATGCGGAAATGGGCGACAAATGCTACGACGTCCATTTAAAC
GAGAGCGAAATGCCGCTGGGACCACGCCTGCGTTACAAGGCCAGCAGGAT
GGGCAACCGATTCCTGGCCGGCATCGACTATGTGGGCGGTGGGCTGGCCC
ACCTGCTTGGTATCACCAGCAGCAAGTATGCCAGCGAATTGGAGAACTAC
CACAGGGCCAAGGAGCACGGCGACGAGGACCTTGACAATTGGCACCCGCG
GGCCATGTCGACCACGACCAGTAGCAGCAACAACAACAGCAGCGGCAACA
ACAATCGCAACGAAACCATCGTCCTATGCGAACCAACACGCAGCGAGGCG
ACCTTGCCACCCACACGGCAGTAGAAGCTTTCTAGACCAT
BS06286.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:50:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8300-RA | 558 | CG8300-PA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:50:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8300-RA | 1060 | CG8300-RA | 271..829 | 16..574 | 2795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:50:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7105792..7106114 | 252..574 | 1615 | 100 | Plus |
X | 23542271 | X | 7105155..7105392 | 16..253 | 1190 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:50:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2449..2562 | 461..571 | 175 | 64 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2682..2914 | 350..573 | 169 | 57.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2524..2682 | 362..520 | 166 | 60.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6881 | 360..520 | 158 | 60.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6884 | 461..578 | 154 | 63.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1056..1107 | 458..509 | 152 | 76.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1540..1605 | 473..538 | 150 | 69.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2421 | 467..578 | 149 | 63.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6815 | 461..544 | 149 | 67.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1104..1163 | 461..520 | 147 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6819..6881 | 461..523 | 144 | 69.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2395 | 459..538 | 143 | 67.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6750..6830 | 461..540 | 141 | 65.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..6772 | 461..504 | 139 | 79.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2264..2452 | 359..538 | 139 | 57.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2788..2838 | 467..517 | 138 | 74.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6796 | 473..546 | 135 | 68 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1549..1612 | 461..520 | 130 | 71.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6751 | 472..504 | 129 | 87.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1110..1178 | 470..538 | 129 | 65.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2577..2626 | 455..503 | 121 | 74 | Plus |
TART-A | 13424 | TART-A 13424bp | 897..942 | 457..501 | 119 | 76.1 | Plus |
TART-A | 13424 | TART-A 13424bp | 12075..12120 | 457..501 | 119 | 76.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1591 | 475..552 | 118 | 68.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2438..2475 | 474..511 | 118 | 78.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1546..1599 | 461..514 | 117 | 68.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5649..5720 | 478..552 | 114 | 68.4 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 529..580 | 476..529 | 112 | 70.4 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 979..1011 | 461..493 | 111 | 81.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6769..6920 | 360..511 | 110 | 55.8 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 151..200 | 468..514 | 108 | 72 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9181..9230 | 468..514 | 108 | 72 | Plus |
BS06286.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:45:35 Download gff for
BS06286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-RA | 1..558 | 17..574 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:33:01 Download gff for
BS06286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-RA | 243..816 | 3..578 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:58 Download gff for
BS06286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-RA | 272..829 | 17..574 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:45:35 Download gff for
BS06286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-RA | 243..816 | 3..578 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:15 Download gff for
BS06286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8300-RA | 272..829 | 17..574 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:15 Download gff for
BS06286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7105794..7106114 | 254..574 | 100 | | Plus |
X | 7105156..7105392 | 17..253 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:58 Download gff for
BS06286.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6999189..6999425 | 17..253 | 100 | -> | Plus |
arm_X | 6999827..7000147 | 254..574 | 100 | | Plus |
BS06286.pep Sequence
Translation from 16 to 573
> BS06286.pep
MSAERNKSGEVRSAAGGLELASASGASASETDNVSALELQSNKRMLYFSD
GVMEELSSGSEDEADAEMGDKCYDVHLNESEMPLGPRLRYKASRMGNRFL
AGIDYVGGGLAHLLGITSSKYASELENYHRAKEHGDEDLDNWHPRAMSTT
TSSSNNNSSGNNNRNETIVLCEPTRSEATLPPTRQ*
BS06286.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:36:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8300-PA | 185 | CG8300-PA | 1..185 | 1..185 | 952 | 100 | Plus |