Clone Sequence Records
BS06294.3prime Sequence
765 bp (764 high quality bases) assembled on 2005-12-03
> BS06294.3prime
ATGGTCTAGAAAGCTTTTAGTCCTTCTCGGCGATCTTGGTGAGGTGTTCC
TCGATCTCCCGCTCATCCAAAATACGGAAAGTGGGATCAGACTTGCTGAC
CACGCCGATCTCAATGCCGTTCGGCTTGAAGTCTATAGCGAGCACACTGG
ACAGACAGGAGATGGCCAGCTGGATCGCTTTCTCCTCCGACAAGTTGGGC
TTGTACTTCTTTTCCAGATAGCTGTTGGCCTCCAGAGTCTTGGCACCCAC
GCTGCAGGCCTTGAACCCGCTGAAGTAGCCAGCCGGGTCCGTCTTGTAAA
CGCTGGGGCCGATTTCATTGTCGTAAGCGATCAGCACCATGCTGCAGCCG
AGCGGACGCATCTCGGCATTCTGCGTGTACACCTGGTTGATATCCGCAAT
TCGACGACACAGCACATCCACGGGCATTTCGTAGCCGTACTTGTAGCGGA
AGTTGGCGGCCTCGTATCTGGCCTTCTGCACCTGTGAGCGGGAATCAGCT
ATGCGTCCGGTCATTGCGCATCCAATGTCCTTGGTGATGCGGAACAGGTG
GGTCACCGTTTCAGGCACGATGTTCTTCTCGGTCACTTTTTTTTGGGTGG
CCACCACGGCACAGTCGCCACTCTTCAGCGCCACCGTGGTGATGTTCTCC
TGGGCAATAGCCTTGAAGGCGTACTCCACTTGGTAGAGGCGTCCCTCCGG
AGAGAAGATCGTGATGTGTCTGTCAAAGCCGGCTGAACTTCCGCGAGACA
TGTCGACTGATAACT
BS06294.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:22:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18495-PB | 735 | Prosalpha6-RB | 1..735 | 751..17 | 3675 | 100 | Minus |
CG18495-PA | 735 | Prosalpha6-RA | 1..735 | 751..17 | 3675 | 100 | Minus |
CG30382-PA | 735 | CG30382-RA | 1..735 | 751..17 | 3675 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:14:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha1-RB | 969 | CG18495-RB | 136..871 | 752..17 | 3680 | 100 | Minus |
Prosalpha1-RA | 902 | CG18495-RA | 69..804 | 752..17 | 3680 | 100 | Minus |
CG30382-RB | 885 | CG30382-RB | 52..787 | 752..17 | 3680 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:14:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7827401..7827885 | 17..501 | 2425 | 100 | Plus |
2R | 25286936 | 2R | 7830511..7830995 | 17..501 | 2425 | 100 | Plus |
2R | 25286936 | 2R | 7831281..7831458 | 499..676 | 890 | 100 | Plus |
2R | 25286936 | 2R | 7828171..7828348 | 499..676 | 890 | 100 | Plus |
2R | 25286936 | 2R | 7828410..7828486 | 676..752 | 385 | 100 | Plus |
2R | 25286936 | 2R | 7831520..7831596 | 676..752 | 385 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 19:14:18 has no hits.
BS06294.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:36:42 Download gff for
BS06294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18495-PB | 1..735 | 17..751 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:14:17 Download gff for
BS06294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-PA | 1..735 | 17..751 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:16:03 Download gff for
BS06294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RB | 47..792 | 8..758 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:33:37 Download gff for
BS06294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RB | 47..792 | 8..758 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:33:37 Download gff for
BS06294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7827396..7827882 | 8..498 | 99 | <- | Plus |
2R | 7828171..7828347 | 499..675 | 100 | <- | Plus |
2R | 7828410..7828491 | 676..758 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:16:03 Download gff for
BS06294.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3714901..3715387 | 8..498 | 99 | <- | Plus |
arm_2R | 3715676..3715852 | 499..675 | 100 | <- | Plus |
arm_2R | 3715915..3715996 | 676..758 | 96 | | Plus |
BS06294.5prime Sequence
765 bp (747 high quality bases) assembled on 2005-12-03
> BS06294.5prime
GAAGTTATCAGTCGACATGTCTCGCGGAAGTTCAGCCGGCTTTGACAGAC
ACATCACGATCTTCTCTCCGGAGGGACGCCTCTACCAAGTGGAGTACGCC
TTCAAGGCTATTGCCCAGGAGAACATCACCACGGTGGCGCTGAAGAGTGG
CGACTGTGCCGTGGTGGCCACCCAAAAAAAAGTGACCGAGAAGAACATCG
TGCCTGAAACGGTGACCCACCTGTTCCGCATCACCAAGGACATTGGATGC
GCAATGACCGGACGCATAGCTGATTCCCGCTCACAGGTGCAGAAGGCCAG
ATACGAGGCCGCCAACTTCCGCTACAAGTACGGCTACGAAATGCCCGTGG
ATGTGCTGTGTCGTCGAATTGCGGATATCAACCAGGTGTACACGCAGAAT
GCCGAGATGCGTCCGCTCGGCTGCAGCATGGTGCTGATCGCTTACGACAA
TGAAATCGGCCCCAGCGTTTACAAGACGGACCCGGCTGGCTACTTCAGCG
GGTTCAAGGCCTGCAGCGTGGGTGCCAAGACTCTGGAGGCCAACAGCTAT
CTGGAAAAGAAGTACAAGCCCAACTTGTCGGAGGAGAAAGCGATCCAGCT
GGCCATCTCCTGTCTGTCCAGTGTGCTCGCTATAGACTTCAAGCCGAACG
GCATTGAGATCGGCGTGGTCAGCAAGTCTGATCCCACTTTCCGTATTTTG
GATGAGCGGGAGATCGAGGAACACCTCACCAAGATCGCCGAGAAGGACTA
AAAGCTTTCTAGACC
BS06294.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:22:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18495-PB | 735 | Prosalpha6-RB | 1..735 | 17..751 | 3675 | 100 | Plus |
CG18495-PA | 735 | Prosalpha6-RA | 1..735 | 17..751 | 3675 | 100 | Plus |
CG30382-PA | 735 | CG30382-RA | 1..735 | 17..751 | 3675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:55:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha1-RB | 969 | CG18495-RB | 136..871 | 16..751 | 3680 | 100 | Plus |
Prosalpha1-RA | 902 | CG18495-RA | 69..804 | 16..751 | 3680 | 100 | Plus |
CG30382-RB | 885 | CG30382-RB | 52..787 | 16..751 | 3680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:55:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7827401..7827885 | 751..267 | 2425 | 100 | Minus |
2R | 25286936 | 2R | 7830511..7830995 | 751..267 | 2425 | 100 | Minus |
2R | 25286936 | 2R | 7828171..7828348 | 269..92 | 890 | 100 | Minus |
2R | 25286936 | 2R | 7831281..7831458 | 269..92 | 890 | 100 | Minus |
2R | 25286936 | 2R | 7828410..7828486 | 92..16 | 385 | 100 | Minus |
2R | 25286936 | 2R | 7831520..7831596 | 92..16 | 385 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:55:34 has no hits.
BS06294.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:36:43 Download gff for
BS06294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18495-PB | 1..735 | 17..751 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:14:19 Download gff for
BS06294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-PA | 1..735 | 17..751 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:45:30 Download gff for
BS06294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RB | 47..792 | 10..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:56:56 Download gff for
BS06294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RB | 47..792 | 10..760 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:56:56 Download gff for
BS06294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7827396..7827882 | 270..760 | 99 | <- | Minus |
2R | 7828171..7828347 | 93..269 | 100 | <- | Minus |
2R | 7828410..7828491 | 10..92 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:45:30 Download gff for
BS06294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3714901..3715387 | 270..760 | 99 | <- | Minus |
arm_2R | 3715676..3715852 | 93..269 | 100 | <- | Minus |
arm_2R | 3715915..3715996 | 10..92 | 96 | | Minus |
BS06294.complete Sequence
767 bp (767 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635435
> BS06294.complete
GAAGTTATCAGTCGACATGTCTCGCGGAAGTTCAGCCGGCTTTGACAGAC
ACATCACGATCTTCTCTCCGGAGGGACGCCTCTACCAAGTGGAGTACGCC
TTCAAGGCTATTGCCCAGGAGAACATCACCACGGTGGCGCTGAAGAGTGG
CGACTGTGCCGTGGTGGCCACCCAAAAAAAAGTGACCGAGAAGAACATCG
TGCCTGAAACGGTGACCCACCTGTTCCGCATCACCAAGGACATTGGATGC
GCAATGACCGGACGCATAGCTGATTCCCGCTCACAGGTGCAGAAGGCCAG
ATACGAGGCCGCCAACTTCCGCTACAAGTACGGCTACGAAATGCCCGTGG
ATGTGCTGTGTCGTCGAATTGCGGATATCAACCAGGTGTACACGCAGAAT
GCCGAGATGCGTCCGCTCGGCTGCAGCATGGTGCTGATCGCTTACGACAA
TGAAATCGGCCCCAGCGTTTACAAGACGGACCCGGCTGGCTACTTCAGCG
GGTTCAAGGCCTGCAGCGTGGGTGCCAAGACTCTGGAGGCCAACAGCTAT
CTGGAAAAGAAGTACAAGCCCAACTTGTCGGAGGAGAAAGCGATCCAGCT
GGCCATCTCCTGTCTGTCCAGTGTGCTCGCTATAGACTTCAAGCCGAACG
GCATTGAGATCGGCGTGGTCAGCAAGTCTGATCCCACTTTCCGTATTTTG
GATGAGCGGGAGATCGAGGAACACCTCACCAAGATCGCCGAGAAGGACTA
AAAGCTTTCTAGACCAT
BS06294.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:03:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha1-RB | 735 | CG18495-PB | 1..735 | 17..751 | 3675 | 100 | Plus |
Prosalpha1-RA | 735 | CG18495-PA | 1..735 | 17..751 | 3675 | 100 | Plus |
CG30382-RB | 735 | CG30382-PB | 1..735 | 17..751 | 3675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha1-RB | 969 | CG18495-RB | 136..871 | 16..751 | 3680 | 100 | Plus |
Prosalpha1-RA | 902 | CG18495-RA | 69..804 | 16..751 | 3680 | 100 | Plus |
CG30382-RB | 885 | CG30382-RB | 52..787 | 16..751 | 3680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7827401..7827885 | 751..267 | 2425 | 100 | Minus |
2R | 25286936 | 2R | 7830511..7830995 | 751..267 | 2425 | 100 | Minus |
2R | 25286936 | 2R | 7828171..7828348 | 269..92 | 890 | 100 | Minus |
2R | 25286936 | 2R | 7831281..7831458 | 269..92 | 890 | 100 | Minus |
2R | 25286936 | 2R | 7828410..7828486 | 92..16 | 385 | 100 | Minus |
2R | 25286936 | 2R | 7831520..7831596 | 92..16 | 385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:03:46 has no hits.
BS06294.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:28 Download gff for
BS06294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RA | 1..735 | 17..751 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:48:57 Download gff for
BS06294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RA | 112..857 | 10..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:37:53 Download gff for
BS06294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RB | 53..785 | 17..749 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:29 Download gff for
BS06294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RA | 112..857 | 10..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:34 Download gff for
BS06294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30382-RB | 53..785 | 17..749 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:34 Download gff for
BS06294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7827403..7827882 | 270..749 | 100 | <- | Minus |
2R | 7828171..7828347 | 93..269 | 100 | <- | Minus |
2R | 7828410..7828485 | 17..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:37:53 Download gff for
BS06294.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3714908..3715387 | 270..749 | 100 | <- | Minus |
arm_2R | 3715676..3715852 | 93..269 | 100 | <- | Minus |
arm_2R | 3715915..3715990 | 17..92 | 100 | | Minus |
BS06294.pep Sequence
Translation from 16 to 750
> BS06294.pep
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVV
ATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAAN
FRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPS
VYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCL
SSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD*
BS06294.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha1-PB | 244 | CG18495-PB | 1..244 | 1..244 | 1247 | 100 | Plus |
Prosalpha1-PA | 244 | CG18495-PA | 1..244 | 1..244 | 1247 | 100 | Plus |
CG30382-PB | 244 | CG30382-PB | 1..244 | 1..244 | 1247 | 100 | Plus |
CG30382-PA | 244 | CG30382-PA | 1..244 | 1..244 | 1247 | 100 | Plus |
Prosalpha7-PA | 253 | CG1519-PA | 7..240 | 8..242 | 317 | 30.5 | Plus |