Clone BS06294 Report

Search the DGRC for BS06294

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:62
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG30382-RA
Protein status:BS06294.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06294.3prime Sequence

765 bp (764 high quality bases) assembled on 2005-12-03

> BS06294.3prime
ATGGTCTAGAAAGCTTTTAGTCCTTCTCGGCGATCTTGGTGAGGTGTTCC
TCGATCTCCCGCTCATCCAAAATACGGAAAGTGGGATCAGACTTGCTGAC
CACGCCGATCTCAATGCCGTTCGGCTTGAAGTCTATAGCGAGCACACTGG
ACAGACAGGAGATGGCCAGCTGGATCGCTTTCTCCTCCGACAAGTTGGGC
TTGTACTTCTTTTCCAGATAGCTGTTGGCCTCCAGAGTCTTGGCACCCAC
GCTGCAGGCCTTGAACCCGCTGAAGTAGCCAGCCGGGTCCGTCTTGTAAA
CGCTGGGGCCGATTTCATTGTCGTAAGCGATCAGCACCATGCTGCAGCCG
AGCGGACGCATCTCGGCATTCTGCGTGTACACCTGGTTGATATCCGCAAT
TCGACGACACAGCACATCCACGGGCATTTCGTAGCCGTACTTGTAGCGGA
AGTTGGCGGCCTCGTATCTGGCCTTCTGCACCTGTGAGCGGGAATCAGCT
ATGCGTCCGGTCATTGCGCATCCAATGTCCTTGGTGATGCGGAACAGGTG
GGTCACCGTTTCAGGCACGATGTTCTTCTCGGTCACTTTTTTTTGGGTGG
CCACCACGGCACAGTCGCCACTCTTCAGCGCCACCGTGGTGATGTTCTCC
TGGGCAATAGCCTTGAAGGCGTACTCCACTTGGTAGAGGCGTCCCTCCGG
AGAGAAGATCGTGATGTGTCTGTCAAAGCCGGCTGAACTTCCGCGAGACA
TGTCGACTGATAACT

BS06294.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG18495-PB 735 Prosalpha6-RB 1..735 751..17 3675 100 Minus
CG18495-PA 735 Prosalpha6-RA 1..735 751..17 3675 100 Minus
CG30382-PA 735 CG30382-RA 1..735 751..17 3675 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
Prosalpha1-RB 969 CG18495-RB 136..871 752..17 3680 100 Minus
Prosalpha1-RA 902 CG18495-RA 69..804 752..17 3680 100 Minus
CG30382-RB 885 CG30382-RB 52..787 752..17 3680 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7827401..7827885 17..501 2425 100 Plus
2R 25286936 2R 7830511..7830995 17..501 2425 100 Plus
2R 25286936 2R 7831281..7831458 499..676 890 100 Plus
2R 25286936 2R 7828171..7828348 499..676 890 100 Plus
2R 25286936 2R 7828410..7828486 676..752 385 100 Plus
2R 25286936 2R 7831520..7831596 676..752 385 100 Plus
Blast to na_te.dros performed on 2015-02-10 19:14:18 has no hits.

BS06294.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:36:42 Download gff for BS06294.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18495-PB 1..735 17..751 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:14:17 Download gff for BS06294.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30382-PA 1..735 17..751 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:16:03 Download gff for BS06294.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30382-RB 47..792 8..758 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:33:37 Download gff for BS06294.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30382-RB 47..792 8..758 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:33:37 Download gff for BS06294.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7827396..7827882 8..498 99 <- Plus
2R 7828171..7828347 499..675 100 <- Plus
2R 7828410..7828491 676..758 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:16:03 Download gff for BS06294.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3714901..3715387 8..498 99 <- Plus
arm_2R 3715676..3715852 499..675 100 <- Plus
arm_2R 3715915..3715996 676..758 96   Plus

BS06294.5prime Sequence

765 bp (747 high quality bases) assembled on 2005-12-03

> BS06294.5prime
GAAGTTATCAGTCGACATGTCTCGCGGAAGTTCAGCCGGCTTTGACAGAC
ACATCACGATCTTCTCTCCGGAGGGACGCCTCTACCAAGTGGAGTACGCC
TTCAAGGCTATTGCCCAGGAGAACATCACCACGGTGGCGCTGAAGAGTGG
CGACTGTGCCGTGGTGGCCACCCAAAAAAAAGTGACCGAGAAGAACATCG
TGCCTGAAACGGTGACCCACCTGTTCCGCATCACCAAGGACATTGGATGC
GCAATGACCGGACGCATAGCTGATTCCCGCTCACAGGTGCAGAAGGCCAG
ATACGAGGCCGCCAACTTCCGCTACAAGTACGGCTACGAAATGCCCGTGG
ATGTGCTGTGTCGTCGAATTGCGGATATCAACCAGGTGTACACGCAGAAT
GCCGAGATGCGTCCGCTCGGCTGCAGCATGGTGCTGATCGCTTACGACAA
TGAAATCGGCCCCAGCGTTTACAAGACGGACCCGGCTGGCTACTTCAGCG
GGTTCAAGGCCTGCAGCGTGGGTGCCAAGACTCTGGAGGCCAACAGCTAT
CTGGAAAAGAAGTACAAGCCCAACTTGTCGGAGGAGAAAGCGATCCAGCT
GGCCATCTCCTGTCTGTCCAGTGTGCTCGCTATAGACTTCAAGCCGAACG
GCATTGAGATCGGCGTGGTCAGCAAGTCTGATCCCACTTTCCGTATTTTG
GATGAGCGGGAGATCGAGGAACACCTCACCAAGATCGCCGAGAAGGACTA
AAAGCTTTCTAGACC

BS06294.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG18495-PB 735 Prosalpha6-RB 1..735 17..751 3675 100 Plus
CG18495-PA 735 Prosalpha6-RA 1..735 17..751 3675 100 Plus
CG30382-PA 735 CG30382-RA 1..735 17..751 3675 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:55:38
Subject Length Description Subject Range Query Range Score Percent Strand
Prosalpha1-RB 969 CG18495-RB 136..871 16..751 3680 100 Plus
Prosalpha1-RA 902 CG18495-RA 69..804 16..751 3680 100 Plus
CG30382-RB 885 CG30382-RB 52..787 16..751 3680 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7827401..7827885 751..267 2425 100 Minus
2R 25286936 2R 7830511..7830995 751..267 2425 100 Minus
2R 25286936 2R 7828171..7828348 269..92 890 100 Minus
2R 25286936 2R 7831281..7831458 269..92 890 100 Minus
2R 25286936 2R 7828410..7828486 92..16 385 100 Minus
2R 25286936 2R 7831520..7831596 92..16 385 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:55:34 has no hits.

BS06294.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:36:43 Download gff for BS06294.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18495-PB 1..735 17..751 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:14:19 Download gff for BS06294.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30382-PA 1..735 17..751 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:45:30 Download gff for BS06294.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30382-RB 47..792 10..760 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:56:56 Download gff for BS06294.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30382-RB 47..792 10..760 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:56:56 Download gff for BS06294.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7827396..7827882 270..760 99 <- Minus
2R 7828171..7828347 93..269 100 <- Minus
2R 7828410..7828491 10..92 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:45:30 Download gff for BS06294.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3714901..3715387 270..760 99 <- Minus
arm_2R 3715676..3715852 93..269 100 <- Minus
arm_2R 3715915..3715996 10..92 96   Minus

BS06294.complete Sequence

767 bp (767 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ635435

> BS06294.complete
GAAGTTATCAGTCGACATGTCTCGCGGAAGTTCAGCCGGCTTTGACAGAC
ACATCACGATCTTCTCTCCGGAGGGACGCCTCTACCAAGTGGAGTACGCC
TTCAAGGCTATTGCCCAGGAGAACATCACCACGGTGGCGCTGAAGAGTGG
CGACTGTGCCGTGGTGGCCACCCAAAAAAAAGTGACCGAGAAGAACATCG
TGCCTGAAACGGTGACCCACCTGTTCCGCATCACCAAGGACATTGGATGC
GCAATGACCGGACGCATAGCTGATTCCCGCTCACAGGTGCAGAAGGCCAG
ATACGAGGCCGCCAACTTCCGCTACAAGTACGGCTACGAAATGCCCGTGG
ATGTGCTGTGTCGTCGAATTGCGGATATCAACCAGGTGTACACGCAGAAT
GCCGAGATGCGTCCGCTCGGCTGCAGCATGGTGCTGATCGCTTACGACAA
TGAAATCGGCCCCAGCGTTTACAAGACGGACCCGGCTGGCTACTTCAGCG
GGTTCAAGGCCTGCAGCGTGGGTGCCAAGACTCTGGAGGCCAACAGCTAT
CTGGAAAAGAAGTACAAGCCCAACTTGTCGGAGGAGAAAGCGATCCAGCT
GGCCATCTCCTGTCTGTCCAGTGTGCTCGCTATAGACTTCAAGCCGAACG
GCATTGAGATCGGCGTGGTCAGCAAGTCTGATCCCACTTTCCGTATTTTG
GATGAGCGGGAGATCGAGGAACACCTCACCAAGATCGCCGAGAAGGACTA
AAAGCTTTCTAGACCAT

BS06294.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:03:47
Subject Length Description Subject Range Query Range Score Percent Strand
Prosalpha1-RB 735 CG18495-PB 1..735 17..751 3675 100 Plus
Prosalpha1-RA 735 CG18495-PA 1..735 17..751 3675 100 Plus
CG30382-RB 735 CG30382-PB 1..735 17..751 3675 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:48
Subject Length Description Subject Range Query Range Score Percent Strand
Prosalpha1-RB 969 CG18495-RB 136..871 16..751 3680 100 Plus
Prosalpha1-RA 902 CG18495-RA 69..804 16..751 3680 100 Plus
CG30382-RB 885 CG30382-RB 52..787 16..751 3680 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7827401..7827885 751..267 2425 100 Minus
2R 25286936 2R 7830511..7830995 751..267 2425 100 Minus
2R 25286936 2R 7828171..7828348 269..92 890 100 Minus
2R 25286936 2R 7831281..7831458 269..92 890 100 Minus
2R 25286936 2R 7828410..7828486 92..16 385 100 Minus
2R 25286936 2R 7831520..7831596 92..16 385 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:03:46 has no hits.

BS06294.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:28 Download gff for BS06294.complete
Subject Subject Range Query Range Percent Splice Strand
CG30382-RA 1..735 17..751 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:48:57 Download gff for BS06294.complete
Subject Subject Range Query Range Percent Splice Strand
CG30382-RA 112..857 10..760 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:37:53 Download gff for BS06294.complete
Subject Subject Range Query Range Percent Splice Strand
CG30382-RB 53..785 17..749 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:29 Download gff for BS06294.complete
Subject Subject Range Query Range Percent Splice Strand
CG30382-RA 112..857 10..760 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:34 Download gff for BS06294.complete
Subject Subject Range Query Range Percent Splice Strand
CG30382-RB 53..785 17..749 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:34 Download gff for BS06294.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7827403..7827882 270..749 100 <- Minus
2R 7828171..7828347 93..269 100 <- Minus
2R 7828410..7828485 17..92 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:37:53 Download gff for BS06294.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3714908..3715387 270..749 100 <- Minus
arm_2R 3715676..3715852 93..269 100 <- Minus
arm_2R 3715915..3715990 17..92 100   Minus

BS06294.pep Sequence

Translation from 16 to 750

> BS06294.pep
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVV
ATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAAN
FRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPS
VYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCL
SSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD*

BS06294.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:56
Subject Length Description Subject Range Query Range Score Percent Strand
Prosalpha1-PB 244 CG18495-PB 1..244 1..244 1247 100 Plus
Prosalpha1-PA 244 CG18495-PA 1..244 1..244 1247 100 Plus
CG30382-PB 244 CG30382-PB 1..244 1..244 1247 100 Plus
CG30382-PA 244 CG30382-PA 1..244 1..244 1247 100 Plus
Prosalpha7-PA 253 CG1519-PA 7..240 8..242 317 30.5 Plus