Clone Sequence Records
BS06327.3prime Sequence
881 bp (862 high quality bases) assembled on 2005-12-03
> BS06327.3prime
ATGGTCTAGAAAGCTTTTACAAACGACGACGGAAGATGGAAGTGGGCAGG
TAAGCGTTCTCAGGGATCTGAGCATTAGCCTTCTGGACGGGACCAGCGGA
GGCGAAGTTCAGGGCGGGTGCCACACCACCGTTGTGGGCCTGAGAGGATC
CTCCCAATTGGTCGTACTGCGACTGGATGGCGCGCTGGGCGTTGGCAGCA
TCCTCGGGAGTGCGGTACTTGACGAAGTGCACCTCGGGCTTGTTGTTATT
GTTGTTGCGGATGGCGTTCAGTTTCTGGGCAAGATCTCCAATATCGGCCT
GCTTGTTCAGGACATAGATGGCGGTCTCCTGCTGGGCAGCCTGCTTGGCG
AGGGCTAGGGCAGCGTTCTCCAGACCACGGTTCTCGGGTCCCTTGATGAA
GACAACGCGCAGTCCCTTGTTTACGGATCCAGCAACACGCTCCAGTTCTT
GTGGCTCATCGAAGTCCTGCTCGTTGGCGGAGTAGGTGAAGAACTCCTTC
TGGAGCTCAGCAGCGGGAGCGGGGGCGTTGTAGGAGACTGGAGCGGCCAG
AGCGTCGCCACCTCCTAGACCACCGAGTCCACCAAGACCGCCAAGACCGG
AATCAATAGAGCCACCACCGATGGAACCACCAAGGGAACCACCTCCAATG
GAACCGCCTCCGATAGAGCCACCACCAATGAGGCCTCCTCCAATGGATCC
TCCTCCAATGGAGCCTCCTCCAATCGAACCACCTCCAATGGATCCACCTC
CAATGCTGCCACTTCCAGGAGCAAAGGACAGTCCGGAGCTGGAGTGTCCC
ACGGGCTGGTAGTTGTAGCCGAGCTTATCGGCGCAGGCGACTGCCACCAG
GCACATTACGATGAAGGCGCGCATGTCGACT
BS06327.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:23:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6447-PA | 858 | CG6447-RA | 1..858 | 874..17 | 4290 | 100 | Minus |
| CG6447-PB | 840 | CG6447-RB | 1..840 | 856..17 | 4200 | 100 | Minus |
| CG6478-PA | 861 | CG6478-RA | 229..702 | 646..173 | 2195 | 98.5 | Minus |
| CG5468-PA | 867 | CG5468-RA | 475..714 | 412..173 | 950 | 95.8 | Minus |
| CG5476-PA | 930 | CG5476-RA | 511..682 | 427..256 | 710 | 96.5 | Minus |
| CG5471-PA | 924 | CG5471-RA | 514..678 | 349..185 | 625 | 95.1 | Minus |
| CG5468-PA | 867 | CG5468-RA | 1..143 | 874..732 | 565 | 95.8 | Minus |
| CG5476-PA | 930 | CG5476-RA | 691..800 | 247..138 | 550 | 100 | Minus |
| CG6452-PA | 690 | CG6452-RA | 250..405 | 427..272 | 430 | 91 | Minus |
| CG6460-PA | 744 | CG6460-RA | 484..570 | 271..185 | 385 | 97.7 | Minus |
| CG6478-PA | 861 | CG6478-RA | 26..110 | 849..765 | 325 | 95.2 | Minus |
| CG6478-PA | 861 | CG6478-RA | 745..836 | 130..39 | 285 | 92.3 | Minus |
| CG5476-PA | 930 | CG5476-RA | 400..485 | 538..453 | 280 | 93 | Minus |
| CG5476-PA | 930 | CG5476-RA | 1..110 | 874..765 | 275 | 90 | Minus |
| CG6460-PA | 744 | CG6460-RA | 406..464 | 349..291 | 270 | 98.3 | Minus |
| CG6452-PA | 690 | CG6452-RA | 442..515 | 235..162 | 245 | 93.2 | Minus |
| CG31080-PA | 726 | CG31080-RA | 391..458 | 349..282 | 240 | 94.1 | Minus |
| CG6478-PA | 861 | CG6478-RA | 127..218 | 748..657 | 235 | 90.2 | Minus |
| CG5468-PA | 867 | CG5468-RA | 386..434 | 501..453 | 195 | 95.9 | Minus |
| CG5471-PA | 924 | CG5471-RA | 442..495 | 421..368 | 195 | 94.4 | Minus |
| CG31080-PA | 726 | CG31080-RA | 478..530 | 262..210 | 190 | 94.3 | Minus |
| CG6460-PA | 744 | CG6460-RA | 334..387 | 421..368 | 170 | 92.5 | Minus |
| CG14243-PA | 771 | CG14243-RA | 505..542 | 235..198 | 165 | 97.3 | Minus |
| CG5480-PA | 852 | CG5480-RA | 418..460 | 349..307 | 165 | 95.3 | Minus |
| CG14250-PA | 738 | CG14250-RA | 486..530 | 242..198 | 150 | 93.3 | Minus |
| CG31080-PA | 726 | CG31080-RA | 338..380 | 402..360 | 140 | 93 | Minus |
| CG14243-PA | 771 | CG14243-RA | 391..428 | 349..312 | 140 | 94.7 | Minus |
| CG14240-PA | 663 | CG14240-RA | 424..456 | 247..215 | 140 | 96.9 | Minus |
| CG5468-PA | 867 | CG5468-RA | 745..791 | 142..96 | 135 | 91.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 01:32:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlL-RA | 1002 | CG6447-RA | 51..909 | 874..16 | 4295 | 100 | Minus |
| TwdlL-RB | 1066 | CG6447-RB | 130..973 | 859..16 | 4220 | 100 | Minus |
| TwdlB-RA | 1025 | CG6478-RA | 48..897 | 874..25 | 3380 | 93.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 01:32:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26624680..26625523 | 16..859 | 4220 | 100 | Plus |
| 3R | 32079331 | 3R | 26622579..26623403 | 25..849 | 3345 | 93.7 | Plus |
| 3R | 32079331 | 3R | 26632323..26632824 | 545..44 | 1775 | 90.2 | Minus |
| 3R | 32079331 | 3R | 26619592..26620103 | 538..27 | 1540 | 86.7 | Minus |
| 3R | 32079331 | 3R | 26630220..26630621 | 499..98 | 1080 | 84.6 | Minus |
| 3R | 32079331 | 3R | 26628051..26628458 | 98..505 | 1065 | 84.1 | Plus |
| 3R | 32079331 | 3R | 26626108..26626448 | 87..427 | 880 | 83.9 | Plus |
| 3R | 32079331 | 3R | 26634088..26634494 | 508..102 | 865 | 80.8 | Minus |
| 3R | 32079331 | 3R | 26619262..26619485 | 856..630 | 620 | 85.9 | Minus |
| 3R | 32079331 | 3R | 26620774..26621063 | 120..409 | 460 | 77.2 | Plus |
| 3R | 32079331 | 3R | 26631931..26632040 | 874..765 | 385 | 90 | Minus |
| 3R | 32079331 | 3R | 26640530..26640724 | 349..155 | 315 | 77.4 | Minus |
| 3R | 32079331 | 3R | 26656956..26657058 | 400..298 | 275 | 84.5 | Minus |
Blast to na_te.dros performed on 2015-02-09 01:32:39 has no hits.
BS06327.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:37:39 Download gff for
BS06327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6447-PA | 1..858 | 17..874 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:15:36 Download gff for
BS06327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6447-PA | 1..858 | 17..874 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 05:55:28 Download gff for
BS06327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlL-RA | 44..916 | 7..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:09:22 Download gff for
BS06327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlL-RA | 44..916 | 7..881 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:09:22 Download gff for
BS06327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26624673..26625523 | 7..859 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 05:55:28 Download gff for
BS06327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22450395..22451245 | 7..859 | 99 | <- | Plus |
BS06327.5prime Sequence
888 bp (807 high quality bases) assembled on 2005-12-03
> BS06327.5prime
GAAGTTATCAGTCGACATGCGCGCCTTCATCGTAATGTGCCTGGTGGCAG
TCGCCTGCGCCGATAAGCTCGGCTACAACTACCAGCCCGTGGGACACTCC
AGCTCCGGACTGTCCTTTGCTCCTGGAAGTGGCAGCATTGGAGGTGGATC
CATTGGAGGTGGTTCGATTGGAGGAGGCTCCATTGGAGGAGGATCCATTG
GAGGAGGCCTCATTGGTGGTGGCTCTATCGGAGGCGGTTCCATTGGAGGT
GGTTCCCTTGGTGGTTCCATCGGTGGTGGCTCTATTGATTCCGGTCTTGG
CGGTCTTGGTGGACTCGGTGGTCTAGGAGGTGGCGACGCTCTGGCCGCTC
CAGTCTCCTACAACGCCCCCGCTCCCGCTGCTGAGCTCCAGAAGGAGTTC
TTCACCTACTCCGCCAACGAGCAGGACTTCGATGAGCCACAAGAACTGGA
GCGTGTTGCTGGATCCGTAAACAAGGGACTGCGCGTTGTCTTCATCAAGG
GACCCGAGAACCGTGGTCTGGAGAACGCTGCCCTAGCCCTCGCCAAGCAG
GCTGCCCAGCAGGAGACCGCCATCTATGTCCTGAACAAGCAGGCCGATAT
TGGAGATCTTGCCCAGAAACTGAACGCCATCCGCAACAACAATAACAACA
AGCCCGAGGTGCACTTCGTCAAGTACCGCACTCCCGAGGATGCTGCCAAC
GCCCAGCGCGCCATCCAGTCGCAGTACGACCAATTGGGAGGATCCTCTCA
GGCCCACAACGGTGGTGTGGCACCCGCCCTGAACTTCGCCTCCGCTGGTC
CCGTCCAGAANGCTAATGCTCAGATCCCTGAGAACGCTTACCTGCCCACT
TCCATCTTCCGTCGTCGTTTGTAAAAGCTTTCTAGACC
BS06327.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6447-PA | 858 | CG6447-RA | 1..858 | 17..874 | 4271 | 99.8 | Plus |
| CG6447-PB | 840 | CG6447-RB | 1..840 | 35..874 | 4181 | 99.8 | Plus |
| CG6478-PA | 861 | CG6478-RA | 229..702 | 245..718 | 2195 | 98.5 | Plus |
| CG5468-PA | 867 | CG5468-RA | 475..714 | 479..718 | 950 | 95.8 | Plus |
| CG5476-PA | 930 | CG5476-RA | 511..682 | 464..635 | 710 | 96.5 | Plus |
| CG5471-PA | 924 | CG5471-RA | 514..678 | 542..706 | 625 | 95.1 | Plus |
| CG5468-PA | 867 | CG5468-RA | 1..143 | 17..159 | 565 | 95.8 | Plus |
| CG5476-PA | 930 | CG5476-RA | 691..800 | 644..753 | 550 | 100 | Plus |
| CG6452-PA | 690 | CG6452-RA | 250..405 | 464..619 | 430 | 91 | Plus |
| CG6460-PA | 744 | CG6460-RA | 484..570 | 620..706 | 385 | 97.7 | Plus |
| CG6478-PA | 861 | CG6478-RA | 26..110 | 42..126 | 325 | 95.2 | Plus |
| CG5476-PA | 930 | CG5476-RA | 400..485 | 353..438 | 280 | 93 | Plus |
| CG5476-PA | 930 | CG5476-RA | 1..110 | 17..126 | 275 | 90 | Plus |
| CG6460-PA | 744 | CG6460-RA | 406..464 | 542..600 | 270 | 98.3 | Plus |
| CG6478-PA | 861 | CG6478-RA | 745..836 | 761..852 | 266 | 91.3 | Plus |
| CG6452-PA | 690 | CG6452-RA | 442..515 | 656..729 | 245 | 93.2 | Plus |
| CG31080-PA | 726 | CG31080-RA | 391..458 | 542..609 | 240 | 94.1 | Plus |
| CG6478-PA | 861 | CG6478-RA | 127..218 | 143..234 | 235 | 90.2 | Plus |
| CG5468-PA | 867 | CG5468-RA | 386..434 | 390..438 | 195 | 95.9 | Plus |
| CG5471-PA | 924 | CG5471-RA | 442..495 | 470..523 | 195 | 94.4 | Plus |
| CG31080-PA | 726 | CG31080-RA | 478..530 | 629..681 | 190 | 94.3 | Plus |
| CG6460-PA | 744 | CG6460-RA | 334..387 | 470..523 | 170 | 92.5 | Plus |
| CG14243-PA | 771 | CG14243-RA | 505..542 | 656..693 | 165 | 97.3 | Plus |
| CG5480-PA | 852 | CG5480-RA | 418..460 | 542..584 | 165 | 95.3 | Plus |
| CG14250-PA | 738 | CG14250-RA | 486..530 | 649..693 | 150 | 93.3 | Plus |
| CG31080-PA | 726 | CG31080-RA | 338..380 | 489..531 | 140 | 93 | Plus |
| CG14243-PA | 771 | CG14243-RA | 391..428 | 542..579 | 140 | 94.7 | Plus |
| CG14240-PA | 663 | CG14240-RA | 424..456 | 644..676 | 140 | 96.9 | Plus |
| CG5468-PA | 867 | CG5468-RA | 745..791 | 749..795 | 135 | 91.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:33:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlL-RA | 1002 | CG6447-RA | 51..909 | 17..875 | 4284 | 99.9 | Plus |
| TwdlL-RB | 1066 | CG6447-RB | 130..973 | 32..875 | 4209 | 99.9 | Plus |
| TwdlB-RA | 1025 | CG6478-RA | 48..897 | 17..866 | 3369 | 93.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:33:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26624680..26625523 | 875..32 | 4209 | 99.9 | Minus |
| 3R | 32079331 | 3R | 26622579..26623403 | 866..42 | 3334 | 93.6 | Minus |
| 3R | 32079331 | 3R | 26632323..26632824 | 346..847 | 1764 | 90 | Plus |
| 3R | 32079331 | 3R | 26619592..26620103 | 353..864 | 1529 | 86.5 | Plus |
| 3R | 32079331 | 3R | 26630220..26630621 | 392..793 | 1080 | 84.6 | Plus |
| 3R | 32079331 | 3R | 26628051..26628458 | 793..386 | 1065 | 84.1 | Minus |
| 3R | 32079331 | 3R | 26626108..26626448 | 804..464 | 880 | 83.9 | Minus |
| 3R | 32079331 | 3R | 26634088..26634494 | 383..789 | 865 | 80.8 | Plus |
| 3R | 32079331 | 3R | 26619262..26619485 | 35..261 | 620 | 85.9 | Plus |
| 3R | 32079331 | 3R | 26620774..26621063 | 771..482 | 460 | 77.2 | Minus |
| 3R | 32079331 | 3R | 26631931..26632040 | 17..126 | 385 | 90 | Plus |
| 3R | 32079331 | 3R | 26640530..26640724 | 542..736 | 315 | 77.4 | Plus |
| 3R | 32079331 | 3R | 26656956..26657058 | 491..593 | 275 | 84.5 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:33:19 has no hits.
BS06327.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:37:40 Download gff for
BS06327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6447-PA | 1..858 | 17..874 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:15:37 Download gff for
BS06327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6447-PA | 1..858 | 17..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:14:04 Download gff for
BS06327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlL-RA | 51..916 | 17..884 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:03:16 Download gff for
BS06327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlL-RA | 51..916 | 17..884 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:03:16 Download gff for
BS06327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26624673..26625523 | 32..884 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:14:04 Download gff for
BS06327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22450395..22451245 | 32..884 | 99 | <- | Minus |
BS06327.complete Sequence
890 bp (890 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635447
> BS06327.complete
GAAGTTATCAGTCGACATGCGCGCCTTCATCGTAATGTGCCTGGTGGCAG
TCGCCTGCGCCGATAAGCTCGGCTACAACTACCAGCCCGTGGGACACTCC
AGCTCCGGACTGTCCTTTGCTCCTGGAAGTGGCAGCATTGGAGGTGGATC
CATTGGAGGTGGTTCGATTGGAGGAGGCTCCATTGGAGGAGGATCCATTG
GAGGAGGCCTCATTGGTGGTGGCTCTATCGGAGGCGGTTCCATTGGAGGT
GGTTCCCTTGGTGGTTCCATCGGTGGTGGCTCTATTGATTCCGGTCTTGG
CGGTCTTGGTGGACTCGGTGGTCTAGGAGGTGGCGACGCTCTGGCCGCTC
CAGTCTCCTACAACGCCCCCGCTCCCGCTGCTGAGCTCCAGAAGGAGTTC
TTCACCTACTCCGCCAACGAGCAGGACTTCGATGAGCCACAAGAACTGGA
GCGTGTTGCTGGATCCGTAAACAAGGGACTGCGCGTTGTCTTCATCAAGG
GACCCGAGAACCGTGGTCTGGAGAACGCTGCCCTAGCCCTCGCCAAGCAG
GCTGCCCAGCAGGAGACCGCCATCTATGTCCTGAACAAGCAGGCCGATAT
TGGAGATCTTGCCCAGAAACTGAACGCCATCCGCAACAACAATAACAACA
AGCCCGAGGTGCACTTCGTCAAGTACCGCACTCCCGAGGATGCTGCCAAC
GCCCAGCGCGCCATCCAGTCGCAGTACGACCAATTGGGAGGATCCTCTCA
GGCCCACAACGGTGGTGTGGCACCCGCCCTGAACTTCGCCTCCGCTGGTC
CCGTCCAGAAGGCTAATGCTCAGATCCCTGAGAACGCTTACCTGCCCACT
TCCATCTTCCGTCGTCGTTTGTAAAAGCTTTCTAGACCAT
BS06327.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:23:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlL-RA | 858 | CG6447-PA | 1..858 | 17..874 | 4290 | 100 | Plus |
| TwdlL-RB | 840 | CG6447-PB | 1..840 | 35..874 | 4200 | 100 | Plus |
| TwdlB-RA | 861 | CG6478-PA | 1..850 | 17..866 | 3380 | 93.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:23:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlL-RA | 1002 | CG6447-RA | 51..909 | 17..875 | 4295 | 100 | Plus |
| TwdlL-RB | 1066 | CG6447-RB | 130..973 | 32..875 | 4220 | 100 | Plus |
| TwdlB-RA | 1025 | CG6478-RA | 48..897 | 17..866 | 3380 | 93.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26624680..26625523 | 875..32 | 4220 | 100 | Minus |
| 3R | 32079331 | 3R | 26622579..26623403 | 866..42 | 3345 | 93.7 | Minus |
| 3R | 32079331 | 3R | 26632323..26632824 | 346..847 | 1775 | 90.2 | Plus |
| 3R | 32079331 | 3R | 26619592..26620103 | 353..864 | 1540 | 86.7 | Plus |
| 3R | 32079331 | 3R | 26630220..26630621 | 392..793 | 1080 | 84.6 | Plus |
| 3R | 32079331 | 3R | 26628051..26628458 | 793..386 | 1065 | 84.1 | Minus |
| 3R | 32079331 | 3R | 26626108..26626448 | 804..464 | 880 | 83.9 | Minus |
| 3R | 32079331 | 3R | 26634088..26634494 | 383..789 | 865 | 80.8 | Plus |
| 3R | 32079331 | 3R | 26619262..26619485 | 35..261 | 620 | 85.9 | Plus |
| 3R | 32079331 | 3R | 26620774..26621063 | 771..482 | 460 | 77.2 | Minus |
| 3R | 32079331 | 3R | 26631931..26632040 | 17..126 | 385 | 90 | Plus |
| 3R | 32079331 | 3R | 26640530..26640724 | 542..736 | 315 | 77.4 | Plus |
| 3R | 32079331 | 3R | 26656956..26657058 | 491..593 | 275 | 84.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:23:58 has no hits.
BS06327.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:16:19 Download gff for
BS06327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlL-RA | 1..858 | 17..874 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:56:47 Download gff for
BS06327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlL-RA | 51..916 | 17..884 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:48:45 Download gff for
BS06327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlL-RA | 51..906 | 17..872 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:16:20 Download gff for
BS06327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlL-RA | 51..916 | 17..884 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:53:06 Download gff for
BS06327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlL-RA | 51..906 | 17..872 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:53:06 Download gff for
BS06327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26624683..26625523 | 32..872 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:48:45 Download gff for
BS06327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22450405..22451245 | 32..872 | 100 | <- | Minus |
BS06327.pep Sequence
Translation from 16 to 873
> BS06327.pep
MRAFIVMCLVAVACADKLGYNYQPVGHSSSGLSFAPGSGSIGGGSIGGGS
IGGGSIGGGSIGGGLIGGGSIGGGSIGGGSLGGSIGGGSIDSGLGGLGGL
GGLGGGDALAAPVSYNAPAPAAELQKEFFTYSANEQDFDEPQELERVAGS
VNKGLRVVFIKGPENRGLENAALALAKQAAQQETAIYVLNKQADIGDLAQ
KLNAIRNNNNNKPEVHFVKYRTPEDAANAQRAIQSQYDQLGGSSQAHNGG
VAPALNFASAGPVQKANAQIPENAYLPTSIFRRRL*
BS06327.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:11:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlL-PA | 285 | CG6447-PA | 1..285 | 1..285 | 1459 | 100 | Plus |
| TwdlL-PB | 279 | CG6447-PB | 1..279 | 7..285 | 1431 | 100 | Plus |
| TwdlB-PA | 286 | CG6478-PA | 1..283 | 1..283 | 1424 | 97.5 | Plus |
| TwdlM-PA | 288 | CG5468-PA | 1..287 | 1..283 | 1249 | 84.7 | Plus |
| TwdlN-PA | 309 | CG5476-PA | 1..304 | 1..283 | 1093 | 74.8 | Plus |
