Clone Sequence Records
BS06328.3prime Sequence
630 bp (629 high quality bases) assembled on 2005-12-03
> BS06328.3prime
ATGGTCTAGAAAGCTTTTAATTAGAAGAAAGGCTGCTAGCGTTCTTCTTG
TCGGCAGCTAAGGCGTTGAACAGACGGTTGACCTCGTTGGCCACCAGGTT
GTCCAGGACGATGCCATTCTGATCGATGAAGGCGGCGCACGACTTGTTGC
TGCTCTGCTCGCGCCGCTTGCCATTTTTCGTGTCGCGAACACTGAGGGTC
AGCAGGTACTTGTCGTCGTACTTGCGCATATCGGAGCTGGCCTCCCACAG
GCGCTCCCGCTCCTTGTCCTTCTGCAGGGCCACCGCAAAGGTGCCCTTCT
CGCGGAAACTGGAGTGCAGGGTCAGAATGCCGAGGAGTGCAAAGTAGGCC
AAAACACTGAAGAGGAGCACTGGACGGGATTCCGGGAAGGGGTGGGTGAA
GTCCCAAGCATGGGCCATTATAGCCACGGAAACGGCGAGGGCGCAGAGGG
CCAAACGGGTGTTGACCAGGCCGAATTGCTCCTTCAGCTGGGGACGATCG
CCAAGGAGGCAGGTTTTCACTGCATCATCGAGGGCGTGCTTCACTGCGGA
TCCATCCCACTTGTTGACCTTCACCAGCTCCTCGCCTTGCTGTGACTTTT
CATCCTTCTTGCCCATGTCGACTGATAACT
BS06328.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:23:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1751-PA | 600 | CG1751-RA | 1..600 | 616..17 | 3000 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 08:37:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spase25-RC | 1188 | CG1751-RC | 144..744 | 616..16 | 3005 | 100 | Minus |
Spase25-RB | 860 | CG1751-RB | 144..744 | 616..16 | 3005 | 100 | Minus |
Spase25-RA | 821 | CG1751-RA | 144..744 | 616..16 | 3005 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 08:36:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11485559..11486122 | 579..16 | 2820 | 100 | Minus |
X | 23542271 | X | 11485393..11485431 | 616..578 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-01 08:37:00 has no hits.
BS06328.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:37:41 Download gff for
BS06328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1751-PA | 1..600 | 17..616 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:15:38 Download gff for
BS06328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1751-PA | 1..600 | 17..616 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:26:53 Download gff for
BS06328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spase25-RA | 134..744 | 16..624 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:53:49 Download gff for
BS06328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spase25-RA | 134..744 | 16..624 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:53:49 Download gff for
BS06328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11485383..11485431 | 578..624 | 91 | -> | Minus |
X | 11485561..11486122 | 16..577 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:26:53 Download gff for
BS06328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11379416..11379464 | 578..624 | 91 | -> | Minus |
arm_X | 11379594..11380155 | 16..577 | 100 | | Minus |
BS06328.5prime Sequence
630 bp (629 high quality bases) assembled on 2005-12-03
> BS06328.5prime
GAAGTTATCAGTCGACATGGGCAAGAAGGATGAAAAGTCACAGCAAGGCG
AGGAGCTGGTGAAGGTCAACAAGTGGGATGGATCCGCAGTGAAGCACGCC
CTCGATGATGCAGTGAAAACCTGCCTCCTTGGCGATCGTCCCCAGCTGAA
GGAGCAATTCGGCCTGGTCAACACCCGTTTGGCCCTCTGCGCCCTCGCCG
TTTCCGTGGCTATAATGGCCCATGCTTGGGACTTCACCCACCCCTTCCCG
GAATCCCGTCCAGTGCTCCTCTTCAGTGTTTTGGCCTACTTTGCACTCCT
CGGCATTCTGACCCTGCACTCCAGTTTCCGCGAGAAGGGCACCTTTGCGG
TGGCCCTGCAGAAGGACAAGGAGCGGGAGCGCCTGTGGGAGGCCAGCTCC
GATATGCGCAAGTACGACGACAAGTACCTGCTGACCCTCAGTGTTCGCGA
CACGAAAAATGGCAAGCGGCGCGAGCAGAGCAGCAACAAGTCGTGCGCCG
CCTTCATCGATCAGAATGGCATCGTCCTGGACAACCTGGTGGCCAACGAG
GTCAACCGTCTGTTCAACGCCTTAGCTGCCGACAAGAAGAACGCTAGCAG
CCTTTCTTCTAATTAAAAGCTTTCTAGACC
BS06328.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:23:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1751-PA | 600 | CG1751-RA | 1..600 | 17..616 | 3000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:52:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spase25-RC | 1188 | CG1751-RC | 144..744 | 17..617 | 3005 | 100 | Plus |
Spase25-RB | 860 | CG1751-RB | 144..744 | 17..617 | 3005 | 100 | Plus |
Spase25-RA | 821 | CG1751-RA | 144..744 | 17..617 | 3005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:52:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11485559..11486122 | 54..617 | 2820 | 100 | Plus |
X | 23542271 | X | 11485393..11485431 | 17..55 | 195 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:52:17 has no hits.
BS06328.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:37:42 Download gff for
BS06328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1751-PA | 1..600 | 17..616 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:15:40 Download gff for
BS06328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1751-PA | 1..600 | 17..616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:32:05 Download gff for
BS06328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spase25-RA | 134..744 | 9..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:58:58 Download gff for
BS06328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spase25-RA | 134..744 | 9..617 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:58:58 Download gff for
BS06328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11485383..11485431 | 9..55 | 91 | -> | Plus |
X | 11485561..11486122 | 56..617 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:32:05 Download gff for
BS06328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11379416..11379464 | 9..55 | 91 | -> | Plus |
arm_X | 11379594..11380155 | 56..617 | 100 | | Plus |
BS06328.complete Sequence
632 bp (632 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635448
> BS06328.complete
GAAGTTATCAGTCGACATGGGCAAGAAGGATGAAAAGTCACAGCAAGGCG
AGGAGCTGGTGAAGGTCAACAAGTGGGATGGATCCGCAGTGAAGCACGCC
CTCGATGATGCAGTGAAAACCTGCCTCCTTGGCGATCGTCCCCAGCTGAA
GGAGCAATTCGGCCTGGTCAACACCCGTTTGGCCCTCTGCGCCCTCGCCG
TTTCCGTGGCTATAATGGCCCATGCTTGGGACTTCACCCACCCCTTCCCG
GAATCCCGTCCAGTGCTCCTCTTCAGTGTTTTGGCCTACTTTGCACTCCT
CGGCATTCTGACCCTGCACTCCAGTTTCCGCGAGAAGGGCACCTTTGCGG
TGGCCCTGCAGAAGGACAAGGAGCGGGAGCGCCTGTGGGAGGCCAGCTCC
GATATGCGCAAGTACGACGACAAGTACCTGCTGACCCTCAGTGTTCGCGA
CACGAAAAATGGCAAGCGGCGCGAGCAGAGCAGCAACAAGTCGTGCGCCG
CCTTCATCGATCAGAATGGCATCGTCCTGGACAACCTGGTGGCCAACGAG
GTCAACCGTCTGTTCAACGCCTTAGCTGCCGACAAGAAGAACGCTAGCAG
CCTTTCTTCTAATTAAAAGCTTTCTAGACCAT
BS06328.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:46:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spase25-RC | 600 | CG1751-PC | 1..600 | 17..616 | 3000 | 100 | Plus |
Spase25-RB | 600 | CG1751-PB | 1..600 | 17..616 | 3000 | 100 | Plus |
Spase25-RA | 600 | CG1751-PA | 1..600 | 17..616 | 3000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:46:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spase25-RC | 1188 | CG1751-RC | 144..744 | 17..617 | 3005 | 100 | Plus |
Spase25-RB | 860 | CG1751-RB | 144..744 | 17..617 | 3005 | 100 | Plus |
Spase25-RA | 821 | CG1751-RA | 144..744 | 17..617 | 3005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:46:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11485559..11486122 | 54..617 | 2820 | 100 | Plus |
X | 23542271 | X | 11485393..11485431 | 17..55 | 195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:46:26 has no hits.
BS06328.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:55:28 Download gff for
BS06328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spase25-RA | 1..600 | 17..616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:31:27 Download gff for
BS06328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spase25-RA | 132..742 | 9..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:52 Download gff for
BS06328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spase25-RA | 144..741 | 17..614 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:55:28 Download gff for
BS06328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spase25-RA | 132..742 | 9..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:56 Download gff for
BS06328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spase25-RA | 144..741 | 17..614 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:56 Download gff for
BS06328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11485393..11485431 | 17..55 | 100 | -> | Plus |
X | 11485561..11486119 | 56..614 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:52 Download gff for
BS06328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11379426..11379464 | 17..55 | 100 | -> | Plus |
arm_X | 11379594..11380152 | 56..614 | 100 | | Plus |
BS06328.pep Sequence
Translation from 16 to 615
> BS06328.pep
MGKKDEKSQQGEELVKVNKWDGSAVKHALDDAVKTCLLGDRPQLKEQFGL
VNTRLALCALAVSVAIMAHAWDFTHPFPESRPVLLFSVLAYFALLGILTL
HSSFREKGTFAVALQKDKERERLWEASSDMRKYDDKYLLTLSVRDTKNGK
RREQSSNKSCAAFIDQNGIVLDNLVANEVNRLFNALAADKKNASSLSSN*
BS06328.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:24:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spase25-PC | 199 | CG1751-PC | 1..199 | 1..199 | 1012 | 100 | Plus |
Spase25-PB | 199 | CG1751-PB | 1..199 | 1..199 | 1012 | 100 | Plus |
Spase25-PA | 199 | CG1751-PA | 1..199 | 1..199 | 1012 | 100 | Plus |