Clone Sequence Records
BS06344.3prime Sequence
675 bp (674 high quality bases) assembled on 2005-12-03
> BS06344.3prime
ATGGTCTAGAAAGCTTTCAGTACGGTCTGGATGGCGGTGGCATGGGCATC
AGGGGACCCATGATTGGGTAAGGGGCGGAGCCCCCAGACGCGGGATAGAA
TCCGCTGGAGGGCACGTTTCCGTAGGCTGGCAGAGAAGTATTTGGGCCCG
GACCCTGGCGCTGTTTGCGCATCAGCTCCTGCATTTTTTCGGCCTTGAGG
CGACGCAGGTGCATGGTCCTCCGGATAGGGAGGAACGCGTCCAGAAAGTC
CTCCACGCCGATATCGCTGTCGTTGAACTTCTTGACCATCTCCTCGGTCT
GCTCCTCGCTCTCGGAGGCAGCTGTCTGCAGCAGGGCCAGCGCCGTTTCA
AGGCCCACTCCGCCCGACTTCTCCTTGAGCTGTGAGAGTTTCTCCTGGAC
AGAGGAGCACCTGGTGCGCCCATCCTCCGAGAGTTCTGCCAGCTGCCCCC
GCAGCTCGATGATCTGCGGCTCCCGCTCGATATTGCGCTCCGCCCGACTC
CTGTTGTCCTCGAAAACACTGGTCTTTTGTGTTCGGAGCACCTGGAGAAC
TTCGTCAACCTTCTCGTCCAGCTTGTCGTCATCGTTCAGCAGTTCCTTCA
GCTCCTCGTGGCACATCGGGGTGATGGTGGCCCGCAGTTGGTATAGGTAT
TCCTGGTACATGTCGACTGATAACT
BS06344.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:23:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1115-PA | 645 | CG1115-RA | 1..645 | 661..17 | 3225 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 16:56:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-RC | 1041 | CG1115-RC | 113..757 | 661..17 | 3225 | 100 | Minus |
Vps37B-RB | 975 | CG1115-RB | 113..757 | 661..17 | 3225 | 100 | Minus |
Vps37B-RA | 1024 | CG1115-RA | 113..757 | 661..17 | 3225 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 16:56:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5226270..5226914 | 661..17 | 3225 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 16:56:04 has no hits.
BS06344.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:38:05 Download gff for
BS06344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-PA | 1..645 | 17..661 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:16:15 Download gff for
BS06344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-PA | 1..645 | 17..661 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:28:42 Download gff for
BS06344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 104..763 | 11..670 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:45:57 Download gff for
BS06344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vps37B-RA | 104..763 | 11..670 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:45:57 Download gff for
BS06344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5226261..5226917 | 17..670 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:28:42 Download gff for
BS06344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1051983..1052639 | 17..670 | 99 | <- | Minus |
BS06344.5prime Sequence
675 bp (674 high quality bases) assembled on 2005-12-03
> BS06344.5prime
GAAGTTATCAGTCGACATGTACCAGGAATACCTATACCAACTGCGGGCCA
CCATCACCCCGATGTGCCACGAGGAGCTGAAGGAACTGCTGAACGATGAC
GACAAGCTGGACGAGAAGGTTGACGAAGTTCTCCAGGTGCTCCGAACACA
AAAGACCAGTGTTTTCGAGGACAACAGGAGTCGGGCGGAGCGCAATATCG
AGCGGGAGCCGCAGATCATCGAGCTGCGGGGGCAGCTGGCAGAACTCTCG
GAGGATGGGCGCACCAGGTGCTCCTCTGTCCAGGAGAAACTCTCACAGCT
CAAGGAGAAGTCGGGCGGAGTGGGCCTTGAAACGGCGCTGGCCCTGCTGC
AGACAGCTGCCTCCGAGAGCGAGGAGCAGACCGAGGAGATGGTCAAGAAG
TTCAACGACAGCGATATCGGCGTGGAGGACTTTCTGGACGCGTTCCTCCC
TATCCGGAGGACCATGCACCTGCGTCGCCTCAAGGCCGAAAAAATGCAGG
AGCTGATGCGCAAACAGCGCCAGGGTCCGGGCCCAAATACTTCTCTGCCA
GCCTACGGAAACGTGCCCTCCAGCGGATTCTATCCCGCGTCTGGGGGCTC
CGCCCCTTACCCAATCATGGGTCCCCTGATGCCCATGCCACCGCCATCCA
GACCGTACTGAAAGCTTTCTAGACC
BS06344.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:23:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1115-PA | 645 | CG1115-RA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:05:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-RC | 1041 | CG1115-RC | 113..757 | 17..661 | 3225 | 100 | Plus |
Vps37B-RB | 975 | CG1115-RB | 113..757 | 17..661 | 3225 | 100 | Plus |
Vps37B-RA | 1024 | CG1115-RA | 113..757 | 17..661 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:05:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5226270..5226914 | 17..661 | 3225 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:05:14 has no hits.
BS06344.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:38:06 Download gff for
BS06344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-PA | 1..645 | 17..661 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:16:16 Download gff for
BS06344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-PA | 1..645 | 17..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:34:03 Download gff for
BS06344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 104..763 | 8..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:53:27 Download gff for
BS06344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vps37B-RA | 104..763 | 8..667 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:53:27 Download gff for
BS06344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5226261..5226917 | 8..661 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:34:03 Download gff for
BS06344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1051983..1052639 | 8..661 | 99 | <- | Plus |
BS06344.complete Sequence
677 bp (677 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635451
> BS06344.complete
GAAGTTATCAGTCGACATGTACCAGGAATACCTATACCAACTGCGGGCCA
CCATCACCCCGATGTGCCACGAGGAGCTGAAGGAACTGCTGAACGATGAC
GACAAGCTGGACGAGAAGGTTGACGAAGTTCTCCAGGTGCTCCGAACACA
AAAGACCAGTGTTTTCGAGGACAACAGGAGTCGGGCGGAGCGCAATATCG
AGCGGGAGCCGCAGATCATCGAGCTGCGGGGGCAGCTGGCAGAACTCTCG
GAGGATGGGCGCACCAGGTGCTCCTCTGTCCAGGAGAAACTCTCACAGCT
CAAGGAGAAGTCGGGCGGAGTGGGCCTTGAAACGGCGCTGGCCCTGCTGC
AGACAGCTGCCTCCGAGAGCGAGGAGCAGACCGAGGAGATGGTCAAGAAG
TTCAACGACAGCGATATCGGCGTGGAGGACTTTCTGGACGCGTTCCTCCC
TATCCGGAGGACCATGCACCTGCGTCGCCTCAAGGCCGAAAAAATGCAGG
AGCTGATGCGCAAACAGCGCCAGGGTCCGGGCCCAAATACTTCTCTGCCA
GCCTACGGAAACGTGCCCTCCAGCGGATTCTATCCCGCGTCTGGGGGCTC
CGCCCCTTACCCAATCATGGGTCCCCTGATGCCCATGCCACCGCCATCCA
GACCGTACTGAAAGCTTTCTAGACCAT
BS06344.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:49:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-RC | 645 | CG1115-PC | 1..645 | 17..661 | 3225 | 100 | Plus |
Vps37B-RB | 645 | CG1115-PB | 1..645 | 17..661 | 3225 | 100 | Plus |
Vps37B-RA | 645 | CG1115-PA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-RC | 1041 | CG1115-RC | 113..757 | 17..661 | 3225 | 100 | Plus |
Vps37B-RB | 975 | CG1115-RB | 113..757 | 17..661 | 3225 | 100 | Plus |
Vps37B-RA | 1024 | CG1115-RA | 113..757 | 17..661 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5226270..5226914 | 17..661 | 3225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:49:27 has no hits.
BS06344.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:16:23 Download gff for
BS06344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 1..645 | 17..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:56:52 Download gff for
BS06344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 102..761 | 8..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:35:18 Download gff for
BS06344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 113..756 | 17..660 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:16:24 Download gff for
BS06344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 102..761 | 8..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:10:46 Download gff for
BS06344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vps37B-RA | 113..756 | 17..660 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:10:46 Download gff for
BS06344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5226270..5226913 | 17..660 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:35:18 Download gff for
BS06344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1051992..1052635 | 17..660 | 100 | | Plus |
BS06344.pep Sequence
Translation from 16 to 660
> BS06344.pep
MYQEYLYQLRATITPMCHEELKELLNDDDKLDEKVDEVLQVLRTQKTSVF
EDNRSRAERNIEREPQIIELRGQLAELSEDGRTRCSSVQEKLSQLKEKSG
GVGLETALALLQTAASESEEQTEEMVKKFNDSDIGVEDFLDAFLPIRRTM
HLRRLKAEKMQELMRKQRQGPGPNTSLPAYGNVPSSGFYPASGGSAPYPI
MGPLMPMPPPSRPY*
BS06344.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:11:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-PC | 214 | CG1115-PC | 1..214 | 1..214 | 1097 | 100 | Plus |
Vps37B-PB | 214 | CG1115-PB | 1..214 | 1..214 | 1097 | 100 | Plus |
Vps37B-PA | 214 | CG1115-PA | 1..214 | 1..214 | 1097 | 100 | Plus |