Clone Sequence Records
BS06349.3prime Sequence
564 bp (563 high quality bases) assembled on 2005-12-03
> BS06349.3prime
ATGGTCTAGAAAGCTTCTATTCGTAGTCGTCCTCTTCCATCGCCTGGTAC
TTGTTGCGCACATGGGCGGCGATGACTTCGCGGGGATTCTTCTTGAAGTT
CTTGTCTTTGATGAGCTTTTCGAAGGACTTGACGGTGTTGACCATTTCAG
TGCGTTTTTTCCGGATCTTCTCGTTGGCACTCAGTCGGACCTCTGGTTCT
GTGAGGGCTGCCCCCTCGGAGACATCCTTTTGCTTGGTCTTCACCAGCTT
GTAGATGTCCTGCAGCGAGGGTAGGGCATCCCGCAGTGGTTTTAGATCTC
CGACAACTTTGGTCTTCTCGCGATTCTTGTGCTCCTCCTTGCGTTTCTTA
CGCGCTTCGGCGAATCTCTTGAGCAGCTTCTTGTGTTTCGCCTCGGATTT
CTCCTTCTTGGTGGTCGTCTTCTTGGGCGTAAGGGTCTTGTGGAGCAGAC
GATCCTCGCGCAGCTTGGCCTTCATGTCCTGAGCCTTCTGCTTGGCCGCC
CCCACCACGCTTTTCGCCTTGGCCCTTACATTTTTCTTCGTTTTTGCCAT
GTCGACTGATAACT
BS06349.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:23:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-PA | 534 | CG16753-RA | 1..534 | 550..17 | 2670 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 08:36:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-RA | 764 | CG16753-RA | 78..615 | 550..13 | 2690 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 08:36:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3055156..3055693 | 550..13 | 2690 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-01 08:36:19 has no hits.
BS06349.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:38:16 Download gff for
BS06349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-PA | 1..534 | 17..550 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:16:28 Download gff for
BS06349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-PA | 1..534 | 17..550 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:26:44 Download gff for
BS06349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 13..558 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:53:43 Download gff for
BS06349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 13..558 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:53:43 Download gff for
BS06349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3055149..3055693 | 13..558 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:26:44 Download gff for
BS06349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3055149..3055693 | 13..558 | 99 | | Minus |
BS06349.5prime Sequence
564 bp (563 high quality bases) assembled on 2005-12-03
> BS06349.5prime
GAAGTTATCAGTCGACATGGCAAAAACGAAGAAAAATGTAAGGGCCAAGG
CGAAAAGCGTGGTGGGGGCGGCCAAGCAGAAGGCTCAGGACATGAAGGCC
AAGCTGCGCGAGGATCGTCTGCTCCACAAGACCCTTACGCCCAAGAAGAC
GACCACCAAGAAGGAGAAATCCGAGGCGAAACACAAGAAGCTGCTCAAGA
GATTCGCCGAAGCGCGTAAGAAACGCAAGGAGGAGCACAAGAATCGCGAG
AAGACCAAAGTTGTCGGAGATCTAAAACCACTGCGGGATGCCCTACCCTC
GCTGCAGGACATCTACAAGCTGGTGAAGACCAAGCAAAAGGATGTCTCCG
AGGGGGCAGCCCTCACAGAACCAGAGGTCCGACTGAGTGCCAACGAGAAG
ATCCGGAAAAAACGCACTGAAATGGTCAACACCGTCAAGTCCTTCGAAAA
GCTCATCAAAGACAAGAACTTCAAGAAGAATCCCCGCGAAGTCATCGCCG
CCCATGTGCGCAACAAGTACCAGGCGATGGAAGAGGACGACTACGAATAG
AAGCTTTCTAGACC
BS06349.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:23:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-PA | 534 | CG16753-RA | 1..534 | 17..550 | 2670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:59:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-RA | 764 | CG16753-RA | 78..615 | 17..554 | 2690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:59:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3055156..3055693 | 17..554 | 2690 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:59:18 has no hits.
BS06349.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:38:17 Download gff for
BS06349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-PA | 1..534 | 17..550 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:16:29 Download gff for
BS06349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-PA | 1..534 | 17..550 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:33:11 Download gff for
BS06349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 9..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:25:00 Download gff for
BS06349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 9..554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:25:00 Download gff for
BS06349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3055149..3055693 | 9..554 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:33:11 Download gff for
BS06349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3055149..3055693 | 9..554 | 99 | | Plus |
BS06349.complete Sequence
566 bp (566 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635453
> BS06349.complete
GAAGTTATCAGTCGACATGGCAAAAACGAAGAAAAATGTAAGGGCCAAGG
CGAAAAGCGTGGTGGGGGCGGCCAAGCAGAAGGCTCAGGACATGAAGGCC
AAGCTGCGCGAGGATCGTCTGCTCCACAAGACCCTTACGCCCAAGAAGAC
GACCACCAAGAAGGAGAAATCCGAGGCGAAACACAAGAAGCTGCTCAAGA
GATTCGCCGAAGCGCGTAAGAAACGCAAGGAGGAGCACAAGAATCGCGAG
AAGACCAAAGTTGTCGGAGATCTAAAACCACTGCGGGATGCCCTACCCTC
GCTGCAGGACATCTACAAGCTGGTGAAGACCAAGCAAAAGGATGTCTCCG
AGGGGGCAGCCCTCACAGAACCAGAGGTCCGACTGAGTGCCAACGAGAAG
ATCCGGAAAAAACGCACTGAAATGGTCAACACCGTCAAGTCCTTCGAAAA
GCTCATCAAAGACAAGAACTTCAAGAAGAATCCCCGCGAAGTCATCGCCG
CCCATGTGCGCAACAAGTACCAGGCGATGGAAGAGGACGACTACGAATAG
AAGCTTTCTAGACCAT
BS06349.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:52:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-RA | 534 | CG16753-PA | 1..534 | 17..550 | 2670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:52:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-RA | 764 | CG16753-RA | 78..615 | 17..554 | 2690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:52:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3055156..3055693 | 17..554 | 2690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:52:20 has no hits.
BS06349.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:16:01 Download gff for
BS06349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 1..534 | 17..550 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:56:27 Download gff for
BS06349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 48..592 | 9..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:33:14 Download gff for
BS06349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 78..611 | 17..550 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:16:01 Download gff for
BS06349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 48..592 | 9..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:39:34 Download gff for
BS06349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 78..611 | 17..550 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:39:34 Download gff for
BS06349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3055156..3055689 | 17..550 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:33:14 Download gff for
BS06349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3055156..3055689 | 17..550 | 100 | | Plus |
BS06349.pep Sequence
Translation from 16 to 549
> BS06349.pep
MAKTKKNVRAKAKSVVGAAKQKAQDMKAKLREDRLLHKTLTPKKTTTKKE
KSEAKHKKLLKRFAEARKKRKEEHKNREKTKVVGDLKPLRDALPSLQDIY
KLVKTKQKDVSEGAALTEPEVRLSANEKIRKKRTEMVNTVKSFEKLIKDK
NFKKNPREVIAAHVRNKYQAMEEDDYE*
BS06349.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:55:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-PA | 177 | CG16753-PA | 1..177 | 1..177 | 882 | 100 | Plus |
