Clone Sequence Records
BS06361.3prime Sequence
684 bp (683 high quality bases) assembled on 2005-12-03
> BS06361.3prime
ATGGTCTAGAAAGCTTTTAAAGAGTGTGGAGCACATCCATGATACGGTTG
CAATCCTCATCGGTATTTAGGCCGATTTTAACAAGATCAGCACGCTCCAA
GGATGCCAGTTCCACCAGATCGATGTGAGCCTCTTCGAAATTGGTCACAT
AGTTCTCCAGGCCCATGTGCATGAGAATCTGTTCCACATTGGCGGCATGG
TTAACCACGTACGAGTGGTTCGATGCTTTGATGGAACGACGACGCGACTC
CAAGGCCAGTGAGGTCTCCATATTCGAGTCATCCGAACAGGTATCCGGGC
TGCTGCAGCTCTTTATTTCTCGCTCCGGCTCGATGATCTCCTCCTGCGGC
TTGGGCAGCACGAATGGCGGGGGCTTAAGCTGAGTGCGATGGCAGTGCTG
ATGCTGCTGCTGCTGCTGCTGCTTGGGATGCACCTTCGTTGGCACTTTCT
TGAAGGTAGCGAACCGCATGGGCGACACTGGACTCTTCCCCTTCGTGCCC
ATATTCTCGATGGGCGAGAGATTGGGCGAACGGAAGTTGCCAAAGATCGG
AGTAGAGCATCGCACGTTGGAGGTGTTCACCTTCAGGGTGTTCCATCTGC
GCTCCTTTAGCGTTGGCGTGCGATTAAGCGTAATTTTGGTCTTGTTCGTG
GGCGTGCGAGAATTCTCCATGTCGACTGATAACT
BS06361.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18543-PA | 654 | mtrm-RA | 1..654 | 670..17 | 3270 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:12:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-RA | 1092 | CG18543-RA | 64..717 | 670..17 | 3270 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:12:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8413075..8413728 | 670..17 | 3270 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 19:12:02 has no hits.
BS06361.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:38:42 Download gff for
BS06361.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-PA | 1..654 | 17..670 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:17:02 Download gff for
BS06361.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18543-PA | 1..654 | 17..670 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:15:18 Download gff for
BS06361.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..717 | 17..670 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:31:22 Download gff for
BS06361.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..717 | 17..670 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:31:22 Download gff for
BS06361.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8413075..8413728 | 17..670 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:15:18 Download gff for
BS06361.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8406175..8406828 | 17..670 | 100 | | Minus |
BS06361.5prime Sequence
684 bp (683 high quality bases) assembled on 2005-12-03
> BS06361.5prime
GAAGTTATCAGTCGACATGGAGAATTCTCGCACGCCCACGAACAAGACCA
AAATTACGCTTAATCGCACGCCAACGCTAAAGGAGCGCAGATGGAACACC
CTGAAGGTGAACACCTCCAACGTGCGATGCTCTACTCCGATCTTTGGCAA
CTTCCGTTCGCCCAATCTCTCGCCCATCGAGAATATGGGCACGAAGGGGA
AGAGTCCAGTGTCGCCCATGCGGTTCGCTACCTTCAAGAAAGTGCCAACG
AAGGTGCATCCCAAGCAGCAGCAGCAGCAGCAGCATCAGCACTGCCATCG
CACTCAGCTTAAGCCCCCGCCATTCGTGCTGCCCAAGCCGCAGGAGGAGA
TCATCGAGCCGGAGCGAGAAATAAAGAGCTGCAGCAGCCCGGATACCTGT
TCGGATGACTCGAATATGGAGACCTCACTGGCCTTGGAGTCGCGTCGTCG
TTCCATCAAAGCATCGAACCACTCGTACGTGGTTAACCATGCCGCCAATG
TGGAACAGATTCTCATGCACATGGGCCTGGAGAACTATGTGACCAATTTC
GAAGAGGCTCACATCGATCTGGTGGAACTGGCATCCTTGGAGCGTGCTGA
TCTTGTTAAAATCGGCCTAAATACCGATGAGGATTGCAACCGTATCATGG
ATGTGCTCCACACTCTTTAAAAGCTTTCTAGACC
BS06361.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18543-PA | 654 | mtrm-RA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:58:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-RA | 1092 | CG18543-RA | 64..717 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:58:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8413075..8413728 | 17..670 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:58:58 has no hits.
BS06361.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:38:43 Download gff for
BS06361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-PA | 1..654 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:17:04 Download gff for
BS06361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18543-PA | 1..654 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:33:06 Download gff for
BS06361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..717 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:23:48 Download gff for
BS06361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..717 | 17..670 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:23:48 Download gff for
BS06361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8413075..8413728 | 17..670 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:33:06 Download gff for
BS06361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8406175..8406828 | 17..670 | 100 | | Plus |
BS06361.complete Sequence
686 bp (686 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635460
> BS06361.complete
GAAGTTATCAGTCGACATGGAGAATTCTCGCACGCCCACGAACAAGACCA
AAATTACGCTTAATCGCACGCCAACGCTAAAGGAGCGCAGATGGAACACC
CTGAAGGTGAACACCTCCAACGTGCGATGCTCTACTCCGATCTTTGGCAA
CTTCCGTTCGCCCAATCTCTCGCCCATCGAGAATATGGGCACGAAGGGGA
AGAGTCCAGTGTCGCCCATGCGGTTCGCTACCTTCAAGAAAGTGCCAACG
AAGGTGCATCCCAAGCAGCAGCAGCAGCAGCAGCATCAGCACTGCCATCG
CACTCAGCTTAAGCCCCCGCCATTCGTGCTGCCCAAGCCGCAGGAGGAGA
TCATCGAGCCGGAGCGAGAAATAAAGAGCTGCAGCAGCCCGGATACCTGT
TCGGATGACTCGAATATGGAGACCTCACTGGCCTTGGAGTCGCGTCGTCG
TTCCATCAAAGCATCGAACCACTCGTACGTGGTTAACCATGCCGCCAATG
TGGAACAGATTCTCATGCACATGGGCCTGGAGAACTATGTGACCAATTTC
GAAGAGGCTCACATCGATCTGGTGGAACTGGCATCCTTGGAGCGTGCTGA
TCTTGTTAAAATCGGCCTAAATACCGATGAGGATTGCAACCGTATCATGG
ATGTGCTCCACACTCTTTAAAAGCTTTCTAGACCAT
BS06361.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:53:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-RA | 654 | CG18543-PA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:54:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-RA | 1092 | CG18543-RA | 64..717 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:53:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8413075..8413728 | 17..670 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:53:57 has no hits.
BS06361.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:16:11 Download gff for
BS06361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 1..654 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:56:36 Download gff for
BS06361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 61..714 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:33:49 Download gff for
BS06361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..715 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:16:11 Download gff for
BS06361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 61..714 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:05 Download gff for
BS06361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..715 | 17..668 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:05 Download gff for
BS06361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8413075..8413726 | 17..668 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:33:49 Download gff for
BS06361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8406175..8406826 | 17..668 | 100 | | Plus |
BS06361.pep Sequence
Translation from 16 to 669
> BS06361.pep
MENSRTPTNKTKITLNRTPTLKERRWNTLKVNTSNVRCSTPIFGNFRSPN
LSPIENMGTKGKSPVSPMRFATFKKVPTKVHPKQQQQQQHQHCHRTQLKP
PPFVLPKPQEEIIEPEREIKSCSSPDTCSDDSNMETSLALESRRRSIKAS
NHSYVVNHAANVEQILMHMGLENYVTNFEEAHIDLVELASLERADLVKIG
LNTDEDCNRIMDVLHTL*
BS06361.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:12:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-PA | 217 | CG18543-PA | 1..217 | 1..217 | 1143 | 100 | Plus |
