Clone Sequence Records
BS06365.3prime Sequence
774 bp (773 high quality bases) assembled on 2005-12-03
> BS06365.3prime
ATGGTCTAGAAAGCTTTTAAAAAAGAAGTTCCGTAACATCATTGCCGAAT
AGTAGGTTCCAGGACTTGGGCACGGTGAGCTTAAAACTGCCATCGCCTCC
GTTGCGCAGCTGAAGGAAGTCTTCGCAGAGTTCGTTCAGTTCCCGGACGA
TTAGAGATGCATCGGTGGAGTTGTCGCCCTCGAGGAGATAGCGGAATAAC
AGCATGACGGGCACCTTCTGCTCATCGAAGGCTTTAAACAACTGCAAGGC
ATTGCCGCCGCCATAGATGGCATCGCCCTTGTGCTCCTTCCACTTGATCA
GCTCCTCATTGCCCAGCTGGGCAGCATGCGCTTCCTTGAAGTTTTCGCTG
GCGCGGTATGCCCATGGCGACTCCTCAATGACTCGTTTCTCGAAGCCGAA
ACTGCCGCTTAGAATGACTACGCGTCTGGCGCCCTTGAGGAGCTCCACTA
GTTCCTTCTGAAAATGCGCGGTGTGGCGGGCAACCCATGGCGCCCGGAAT
TGCACGACCAGTAGCTTATCCTCCGTACCCTCGTACAGTTCGCAGGAGGA
GACCTTCTCTTTGGGCTCGTGCTGATAGGCGGAGGGTCCGTAGACCGGAA
TCAGGGCTGGATGTGTGATGGATCCAATTCGCCGGAGTTCCTTGGACGCA
ATCAACAGGTCACAGGCCAGCTGCGCCGCGTTTCCCACGCAAATGCTCGG
TATGATTACTGTGTGCTCTGCTACGTCCAGAGTGGTACGCTTGTCCTTTA
GAAACAGCATGTCGACTGATAACT
BS06365.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-PA | 744 | CG12321-RA | 1..744 | 760..17 | 3720 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:13:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-RA | 903 | CG12321-RA | 103..846 | 760..17 | 3720 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:13:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18187862..18188605 | 17..760 | 3720 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:13:13 has no hits.
BS06365.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:38:48 Download gff for
BS06365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-PA | 1..744 | 17..760 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:17:11 Download gff for
BS06365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-PA | 1..744 | 17..760 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:49:08 Download gff for
BS06365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 7..760 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:24:02 Download gff for
BS06365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 7..760 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:24:02 Download gff for
BS06365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18187855..18188605 | 7..760 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:49:08 Download gff for
BS06365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14013577..14014327 | 7..760 | 99 | | Plus |
BS06365.5prime Sequence
774 bp (773 high quality bases) assembled on 2005-12-03
> BS06365.5prime
GAAGTTATCAGTCGACATGCTGTTTCTAAAGGACAAGCGTACCACTCTGG
ACGTAGCAGAGCACACAGTAATCATACCGAGCATTTGCGTGGGAAACGCG
GCGCAGCTGGCCTGTGACCTGTTGATTGCGTCCAAGGAACTCCGGCGAAT
TGGATCCATCACACATCCAGCCCTGATTCCGGTCTACGGACCCTCCGCCT
ATCAGCACGAGCCCAAAGAGAAGGTCTCCTCCTGCGAACTGTACGAGGGT
ACGGAGGATAAGCTACTGGTCGTGCAATTCCGGGCGCCATGGGTTGCCCG
CCACACCGCGCATTTTCAGAAGGAACTAGTGGAGCTCCTCAAGGGCGCCA
GACGCGTAGTCATTCTAAGCGGCAGTTTCGGCTTCGAGAAACGAGTCATT
GAGGAGTCGCCATGGGCATACCGCGCCAGCGAAAACTTCAAGGAAGCGCA
TGCTGCCCAGCTGGGCAATGAGGAGCTGATCAAGTGGAAGGAGCACAAGG
GCGATGCCATCTATGGCGGCGGCAATGCCTTGCAGTTGTTTAAAGCCTTC
GATGAGCAGAAGGTGCCCGTCATGCTGTTATTCCGCTATCTCCTCGAGGG
CGACAACTCCACCGATGCATCTCTAATCGTCCGGGAACTGAACGAACTCT
GCGAAGACTTCCTTCAGCTGCGCAACGGAGGCGATGGCAGTTTTAAGCTC
ACCGTGCCCAAGTCCTGGAACCTACTATTCGGCAATGATGTTACGGAACT
TCTTTTTTAAAAGCTTTCTAGACC
BS06365.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-PA | 744 | CG12321-RA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:04:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-RA | 903 | CG12321-RA | 103..846 | 17..760 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:04:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18187862..18188605 | 760..17 | 3720 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 13:04:40 has no hits.
BS06365.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:38:49 Download gff for
BS06365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-PA | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:17:12 Download gff for
BS06365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-PA | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:07:23 Download gff for
BS06365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 17..770 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:39:53 Download gff for
BS06365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 17..770 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:39:53 Download gff for
BS06365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18187855..18188605 | 17..770 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:07:23 Download gff for
BS06365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14013577..14014327 | 17..770 | 99 | | Minus |
BS06365.complete Sequence
776 bp (776 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635461
> BS06365.complete
GAAGTTATCAGTCGACATGCTGTTTCTAAAGGACAAGCGTACCACTCTGG
ACGTAGCAGAGCACACAGTAATCATACCGAGCATTTGCGTGGGAAACGCG
GCGCAGCTGGCCTGTGACCTGTTGATTGCGTCCAAGGAACTCCGGCGAAT
TGGATCCATCACACATCCAGCCCTGATTCCGGTCTACGGACCCTCCGCCT
ATCAGCACGAGCCCAAAGAGAAGGTCTCCTCCTGCGAACTGTACGAGGGT
ACGGAGGATAAGCTACTGGTCGTGCAATTCCGGGCGCCATGGGTTGCCCG
CCACACCGCGCATTTTCAGAAGGAACTAGTGGAGCTCCTCAAGGGCGCCA
GACGCGTAGTCATTCTAAGCGGCAGTTTCGGCTTCGAGAAACGAGTCATT
GAGGAGTCGCCATGGGCATACCGCGCCAGCGAAAACTTCAAGGAAGCGCA
TGCTGCCCAGCTGGGCAATGAGGAGCTGATCAAGTGGAAGGAGCACAAGG
GCGATGCCATCTATGGCGGCGGCAATGCCTTGCAGTTGTTTAAAGCCTTC
GATGAGCAGAAGGTGCCCGTCATGCTGTTATTCCGCTATCTCCTCGAGGG
CGACAACTCCACCGATGCATCTCTAATCGTCCGGGAACTGAACGAACTCT
GCGAAGACTTCCTTCAGCTGCGCAACGGAGGCGATGGCAGTTTTAAGCTC
ACCGTGCCCAAGTCCTGGAACCTACTATTCGGCAATGATGTTACGGAACT
TCTTTTTTAAAAGCTTTCTAGACCAT
BS06365.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:57:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-RA | 744 | CG12321-PA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:57:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-RA | 903 | CG12321-RA | 103..846 | 17..760 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:57:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18187862..18188605 | 760..17 | 3720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:57:10 has no hits.
BS06365.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:16:12 Download gff for
BS06365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:56:38 Download gff for
BS06365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 58..808 | 17..770 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:29:38 Download gff for
BS06365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..844 | 17..758 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:16:12 Download gff for
BS06365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 58..808 | 17..770 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:59:53 Download gff for
BS06365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..844 | 17..758 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:59:53 Download gff for
BS06365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18187864..18188605 | 17..758 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:29:38 Download gff for
BS06365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14013586..14014327 | 17..758 | 100 | | Minus |
BS06365.pep Sequence
Translation from 16 to 759
> BS06365.pep
MLFLKDKRTTLDVAEHTVIIPSICVGNAAQLACDLLIASKELRRIGSITH
PALIPVYGPSAYQHEPKEKVSSCELYEGTEDKLLVVQFRAPWVARHTAHF
QKELVELLKGARRVVILSGSFGFEKRVIEESPWAYRASENFKEAHAAQLG
NEELIKWKEHKGDAIYGGGNALQLFKAFDEQKVPVMLLFRYLLEGDNSTD
ASLIVRELNELCEDFLQLRNGGDGSFKLTVPKSWNLLFGNDVTELLF*
BS06365.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:11:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-PA | 247 | CG12321-PA | 1..247 | 1..247 | 1280 | 100 | Plus |
