Clone Sequence Records
BS06385.3prime Sequence
882 bp (793 high quality bases) assembled on 2005-12-03
> BS06385.3prime
ATGGTCTAGAAAGCTTTCAGGTGCGCATCGAGGGATCCCCGGCGGAGTGC
TCGCGATGATGCGGCAGCTTGGGCGGTAGCTTAAAGGGCCGAATGAACTT
GATGTTCGTCTTGAGGCAATCGGGCAGCAAATTGGGTGGCAGCAGGCAGT
GCAGGAAGAGGTGCGTCAGATAGCCGGTGATGCCCCAGATGCGATAATGG
TCTACAACAAATACTGGACCGCTGTAGCCGCTACGAAACTGTGTGTGCCT
GGTGGCCTTGGGCAGCATTAGCGAAGTGAGCGGCACACTAAACGCCTCCT
CCACCTCCTCCCAGTTGAGACGCAGCTCGGAGAGGCTAAAGTCCGGCACC
ACGCCCACCACTGGCACAATCGACGAGGTCCTCGGCAGCTGTAGCTGCTT
GGCCTCGCCCCACACCTGGATGCGATGGCGCGGTAGGCCGATCTCCTCCT
CTGTTTCGCGCAGCGCACAGTCCACGTAGCTCGAGTCGTGATCATCGCGC
CTTCCGCCCGGAAAGGAGATCTGAAAGCTGTGGCTGCGCAGGTGTCGCGA
TCGTCGGGTGTATAGTAGGGATATTTCATTCGTGCCGCGCTCCTGGCAGA
GGGCGATAAGAACCGCGGATGTCTGCTTTTCCCGGCGACTGGGCGTGAGC
GCCTTGGGACGCGGGAATGCCGGCAGGCTGCGCATCTTCTCCATGCACCT
GCGCTGCGATTCCGGTCCGAGGAGCTGGTCGGCAGTGATCGACTGGTCGA
CATCCGGCGGTTTCGAGGACGTGGCGGATGCGGCGCTTGAGCAGGAGGTG
ACCAGATGGCGGTTCAAGTGCAACAGTAGCTGCGGCACTGTGCGACTCGC
CTGGGGCATCAGGGACATGTCGACTGATAACT
BS06385.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-PA | 852 | CG11095-RA | 1..852 | 868..17 | 4210 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 17:55:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-RA | 1121 | CG11095-RA | 76..927 | 868..17 | 4230 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 17:55:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13812112..13812676 | 581..17 | 2825 | 100 | Minus |
X | 23542271 | X | 13811759..13812046 | 868..581 | 1410 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-02-02 17:55:35 has no hits.
BS06385.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:39:26 Download gff for
BS06385.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-PA | 1..852 | 17..868 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:18:04 Download gff for
BS06385.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-PA | 1..852 | 17..868 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:07:51 Download gff for
BS06385.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..927 | 17..868 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:49:23 Download gff for
BS06385.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..927 | 17..868 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:49:23 Download gff for
BS06385.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13811759..13812045 | 582..868 | 99 | -> | Minus |
X | 13812112..13812676 | 17..581 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:07:51 Download gff for
BS06385.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13705792..13706078 | 582..868 | 99 | -> | Minus |
arm_X | 13706145..13706709 | 17..581 | 100 | | Minus |
BS06385.5prime Sequence
887 bp (840 high quality bases) assembled on 2005-12-03
> BS06385.5prime
GAAGTTATCAGTCGACATGTCCCTGATTGCCCAGGCGAGTCGCACAGTGC
CGCAGCTACTGTTGCACTTGAACCGCCATCTGGTCACCTCCTGCTCAAGC
GCCGCATCCGCCACGTCCTCGAAACCGCCGGATGTCGACCAGTCGATCAC
TGCCGACCAGCTCCTCGGACCGGAATCGCAGCGCAGGTGCATGGAGAAGA
TGCGCAGCCTGCCGGCATTCCCGCGTCCCAAGGCGCTCACGCCCAGTCGC
CGGGAAAAGCAGACATCCGCGGTTCTTATCGCCCTCTGCCAGGAGCGCGG
CACGAATGAAATATCCCTACTATACACCCGACGATCGCGACACCTGCGCA
GCCACAGCTTTCAGATCTCCTTTCCGGGCGGAAGGCGCGATGATCACGAC
TCGAGCTACGTGGACTGTGCGCTGCGCGAAACAGAGGAGGAGATCGGCCT
ACCGCGCCATCGCATCCAGGTGTGGGGCGAGGCCAAGCAGCTACAGCTGC
CGAGGACCTCGTCGATTGTGCCAGTGGTGGGCGTGGTGCCGGACTTTAGC
CTCTCCGAGCTGCGTCTCAACTGGGAGGAGGTGGAGGAGGCGTTTAGTGT
GCCGCTCACTTCGCTAATGCTGCCCAAGGCCACCAGGCACACACAGTTTC
GTAGCGGCTACAGCGGTCCAGTATTTGTTGTAGACCATTATCGCATCTGG
GGCATCACCGGCTATCTGACGCACCTCTTCCTGCACTGCCTGCTGCCACC
CAATTTGCTGCCCGATTGCCTCAAGACGAACATCAAGTTCATTCGGCCCT
TTTAGCTACCGCCCAAGCTGCCGCATCATCGCGAGCACTCCGCCGGGGGA
TCCCTCGATGCGCACCTGAAAGCTTTCTAGACCATTC
BS06385.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-PA | 852 | CG11095-RA | 1..832 | 17..848 | 4135 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:44:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-RA | 1121 | CG11095-RA | 76..927 | 17..869 | 4225 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:44:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13812112..13812676 | 304..869 | 2765 | 99.6 | Plus |
X | 23542271 | X | 13811759..13812046 | 17..304 | 1440 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:44:57 has no hits.
BS06385.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:39:26 Download gff for
BS06385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-PA | 1..852 | 17..869 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:18:05 Download gff for
BS06385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-PA | 1..852 | 17..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:33:23 Download gff for
BS06385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..927 | 17..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:46:43 Download gff for
BS06385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..927 | 17..869 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:46:43 Download gff for
BS06385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13811759..13812045 | 17..303 | 100 | -> | Plus |
X | 13812112..13812676 | 304..869 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:33:23 Download gff for
BS06385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13705792..13706078 | 17..303 | 100 | -> | Plus |
arm_X | 13706145..13706709 | 304..869 | 99 | | Plus |
BS06385.complete Sequence
884 bp (884 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635470
> BS06385.complete
GAAGTTATCAGTCGACATGTCCCTGATTGCCCAGGCGAGTCGCACAGTGC
CGCAGCTACTGTTGCACTTGAACCGCCATCTGGTCACCTCCTGCTCAAGC
GCCGCATCCGCCACGTCCTCGAAACCGCCGGATGTCGACCAGTCGATCAC
TGCCGACCAGCTCCTCGGACCGGAATCGCAGCGCAGGTGCATGGAGAAGA
TGCGCAGCCTGCCGGCATTCCCGCGTCCCAAGGCGCTCACGCCCAGTCGC
CGGGAAAAGCAGACATCCGCGGTTCTTATCGCCCTCTGCCAGGAGCGCGG
CACGAATGAAATATCCCTACTATACACCCGACGATCGCGACACCTGCGCA
GCCACAGCTTTCAGATCTCCTTTCCGGGCGGAAGGCGCGATGATCACGAC
TCGAGCTACGTGGACTGTGCGCTGCGCGAAACAGAGGAGGAGATCGGCCT
ACCGCGCCATCGCATCCAGGTGTGGGGCGAGGCCAAGCAGCTACAGCTGC
CGAGGACCTCGTCGATTGTGCCAGTGGTGGGCGTGGTGCCGGACTTTAGC
CTCTCCGAGCTGCGTCTCAACTGGGAGGAGGTGGAGGAGGCGTTTAGTGT
GCCGCTCACTTCGCTAATGCTGCCCAAGGCCACCAGGCACACACAGTTTC
GTAGCGGCTACAGCGGTCCAGTATTTGTTGTAGACCATTATCGCATCTGG
GGCATCACCGGCTATCTGACGCACCTCTTCCTGCACTGCCTGCTGCCACC
CAATTTGCTGCCCGATTGCCTCAAGACGAACATCAAGTTCATTCGGCCCT
TTAAGCTACCGCCCAAGCTGCCGCATCATCGCGAGCACTCCGCCGGGGAT
CCCTCGATGCGCACCTGAAAGCTTTCTAGACCAT
BS06385.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:41:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-RA | 852 | CG11095-PA | 1..852 | 17..868 | 4260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:41:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-RA | 1121 | CG11095-RA | 76..927 | 17..868 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:41:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13812112..13812676 | 304..868 | 2825 | 100 | Plus |
X | 23542271 | X | 13811759..13812046 | 17..304 | 1440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:41:52 has no hits.
BS06385.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:15:54 Download gff for
BS06385.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 1..852 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:56:23 Download gff for
BS06385.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 61..912 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:07 Download gff for
BS06385.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..926 | 17..867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:15:55 Download gff for
BS06385.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 61..912 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:59 Download gff for
BS06385.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..926 | 17..867 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:59 Download gff for
BS06385.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13811759..13812045 | 17..303 | 100 | -> | Plus |
X | 13812112..13812675 | 304..867 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:07 Download gff for
BS06385.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13705792..13706078 | 17..303 | 100 | -> | Plus |
arm_X | 13706145..13706708 | 304..867 | 100 | | Plus |
BS06385.pep Sequence
Translation from 16 to 867
> BS06385.pep
MSLIAQASRTVPQLLLHLNRHLVTSCSSAASATSSKPPDVDQSITADQLL
GPESQRRCMEKMRSLPAFPRPKALTPSRREKQTSAVLIALCQERGTNEIS
LLYTRRSRHLRSHSFQISFPGGRRDDHDSSYVDCALRETEEEIGLPRHRI
QVWGEAKQLQLPRTSSIVPVVGVVPDFSLSELRLNWEEVEEAFSVPLTSL
MLPKATRHTQFRSGYSGPVFVVDHYRIWGITGYLTHLFLHCLLPPNLLPD
CLKTNIKFIRPFKLPPKLPHHREHSAGDPSMRT*
BS06385.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:55:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-PA | 283 | CG11095-PA | 1..283 | 1..283 | 1484 | 100 | Plus |