Clone BS06385 Report

Search the DGRC for BS06385

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:63
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCG11095-RA
Protein status:BS06385.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06385.3prime Sequence

882 bp (793 high quality bases) assembled on 2005-12-03

> BS06385.3prime
ATGGTCTAGAAAGCTTTCAGGTGCGCATCGAGGGATCCCCGGCGGAGTGC
TCGCGATGATGCGGCAGCTTGGGCGGTAGCTTAAAGGGCCGAATGAACTT
GATGTTCGTCTTGAGGCAATCGGGCAGCAAATTGGGTGGCAGCAGGCAGT
GCAGGAAGAGGTGCGTCAGATAGCCGGTGATGCCCCAGATGCGATAATGG
TCTACAACAAATACTGGACCGCTGTAGCCGCTACGAAACTGTGTGTGCCT
GGTGGCCTTGGGCAGCATTAGCGAAGTGAGCGGCACACTAAACGCCTCCT
CCACCTCCTCCCAGTTGAGACGCAGCTCGGAGAGGCTAAAGTCCGGCACC
ACGCCCACCACTGGCACAATCGACGAGGTCCTCGGCAGCTGTAGCTGCTT
GGCCTCGCCCCACACCTGGATGCGATGGCGCGGTAGGCCGATCTCCTCCT
CTGTTTCGCGCAGCGCACAGTCCACGTAGCTCGAGTCGTGATCATCGCGC
CTTCCGCCCGGAAAGGAGATCTGAAAGCTGTGGCTGCGCAGGTGTCGCGA
TCGTCGGGTGTATAGTAGGGATATTTCATTCGTGCCGCGCTCCTGGCAGA
GGGCGATAAGAACCGCGGATGTCTGCTTTTCCCGGCGACTGGGCGTGAGC
GCCTTGGGACGCGGGAATGCCGGCAGGCTGCGCATCTTCTCCATGCACCT
GCGCTGCGATTCCGGTCCGAGGAGCTGGTCGGCAGTGATCGACTGGTCGA
CATCCGGCGGTTTCGAGGACGTGGCGGATGCGGCGCTTGAGCAGGAGGTG
ACCAGATGGCGGTTCAAGTGCAACAGTAGCTGCGGCACTGTGCGACTCGC
CTGGGGCATCAGGGACATGTCGACTGATAACT

BS06385.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG11095-PA 852 CG11095-RA 1..852 868..17 4210 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 17:55:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG11095-RA 1121 CG11095-RA 76..927 868..17 4230 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 17:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13812112..13812676 581..17 2825 100 Minus
X 23542271 X 13811759..13812046 868..581 1410 99.3 Minus
Blast to na_te.dros performed on 2015-02-02 17:55:35 has no hits.

BS06385.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:39:26 Download gff for BS06385.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11095-PA 1..852 17..868 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:18:04 Download gff for BS06385.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11095-PA 1..852 17..868 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:07:51 Download gff for BS06385.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11095-RA 76..927 17..868 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:49:23 Download gff for BS06385.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11095-RA 76..927 17..868 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:49:23 Download gff for BS06385.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13811759..13812045 582..868 99 -> Minus
X 13812112..13812676 17..581 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:07:51 Download gff for BS06385.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13705792..13706078 582..868 99 -> Minus
arm_X 13706145..13706709 17..581 100   Minus

BS06385.5prime Sequence

887 bp (840 high quality bases) assembled on 2005-12-03

> BS06385.5prime
GAAGTTATCAGTCGACATGTCCCTGATTGCCCAGGCGAGTCGCACAGTGC
CGCAGCTACTGTTGCACTTGAACCGCCATCTGGTCACCTCCTGCTCAAGC
GCCGCATCCGCCACGTCCTCGAAACCGCCGGATGTCGACCAGTCGATCAC
TGCCGACCAGCTCCTCGGACCGGAATCGCAGCGCAGGTGCATGGAGAAGA
TGCGCAGCCTGCCGGCATTCCCGCGTCCCAAGGCGCTCACGCCCAGTCGC
CGGGAAAAGCAGACATCCGCGGTTCTTATCGCCCTCTGCCAGGAGCGCGG
CACGAATGAAATATCCCTACTATACACCCGACGATCGCGACACCTGCGCA
GCCACAGCTTTCAGATCTCCTTTCCGGGCGGAAGGCGCGATGATCACGAC
TCGAGCTACGTGGACTGTGCGCTGCGCGAAACAGAGGAGGAGATCGGCCT
ACCGCGCCATCGCATCCAGGTGTGGGGCGAGGCCAAGCAGCTACAGCTGC
CGAGGACCTCGTCGATTGTGCCAGTGGTGGGCGTGGTGCCGGACTTTAGC
CTCTCCGAGCTGCGTCTCAACTGGGAGGAGGTGGAGGAGGCGTTTAGTGT
GCCGCTCACTTCGCTAATGCTGCCCAAGGCCACCAGGCACACACAGTTTC
GTAGCGGCTACAGCGGTCCAGTATTTGTTGTAGACCATTATCGCATCTGG
GGCATCACCGGCTATCTGACGCACCTCTTCCTGCACTGCCTGCTGCCACC
CAATTTGCTGCCCGATTGCCTCAAGACGAACATCAAGTTCATTCGGCCCT
TTTAGCTACCGCCCAAGCTGCCGCATCATCGCGAGCACTCCGCCGGGGGA
TCCCTCGATGCGCACCTGAAAGCTTTCTAGACCATTC

BS06385.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG11095-PA 852 CG11095-RA 1..832 17..848 4135 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:44:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG11095-RA 1121 CG11095-RA 76..927 17..869 4225 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:44:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13812112..13812676 304..869 2765 99.6 Plus
X 23542271 X 13811759..13812046 17..304 1440 100 Plus
Blast to na_te.dros performed on 2015-02-11 18:44:57 has no hits.

BS06385.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:39:26 Download gff for BS06385.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11095-PA 1..852 17..869 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:18:05 Download gff for BS06385.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11095-PA 1..852 17..869 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:33:23 Download gff for BS06385.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11095-RA 76..927 17..869 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:46:43 Download gff for BS06385.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11095-RA 76..927 17..869 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:46:43 Download gff for BS06385.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13811759..13812045 17..303 100 -> Plus
X 13812112..13812676 304..869 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:33:23 Download gff for BS06385.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13705792..13706078 17..303 100 -> Plus
arm_X 13706145..13706709 304..869 99   Plus

BS06385.complete Sequence

884 bp (884 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ635470

> BS06385.complete
GAAGTTATCAGTCGACATGTCCCTGATTGCCCAGGCGAGTCGCACAGTGC
CGCAGCTACTGTTGCACTTGAACCGCCATCTGGTCACCTCCTGCTCAAGC
GCCGCATCCGCCACGTCCTCGAAACCGCCGGATGTCGACCAGTCGATCAC
TGCCGACCAGCTCCTCGGACCGGAATCGCAGCGCAGGTGCATGGAGAAGA
TGCGCAGCCTGCCGGCATTCCCGCGTCCCAAGGCGCTCACGCCCAGTCGC
CGGGAAAAGCAGACATCCGCGGTTCTTATCGCCCTCTGCCAGGAGCGCGG
CACGAATGAAATATCCCTACTATACACCCGACGATCGCGACACCTGCGCA
GCCACAGCTTTCAGATCTCCTTTCCGGGCGGAAGGCGCGATGATCACGAC
TCGAGCTACGTGGACTGTGCGCTGCGCGAAACAGAGGAGGAGATCGGCCT
ACCGCGCCATCGCATCCAGGTGTGGGGCGAGGCCAAGCAGCTACAGCTGC
CGAGGACCTCGTCGATTGTGCCAGTGGTGGGCGTGGTGCCGGACTTTAGC
CTCTCCGAGCTGCGTCTCAACTGGGAGGAGGTGGAGGAGGCGTTTAGTGT
GCCGCTCACTTCGCTAATGCTGCCCAAGGCCACCAGGCACACACAGTTTC
GTAGCGGCTACAGCGGTCCAGTATTTGTTGTAGACCATTATCGCATCTGG
GGCATCACCGGCTATCTGACGCACCTCTTCCTGCACTGCCTGCTGCCACC
CAATTTGCTGCCCGATTGCCTCAAGACGAACATCAAGTTCATTCGGCCCT
TTAAGCTACCGCCCAAGCTGCCGCATCATCGCGAGCACTCCGCCGGGGAT
CCCTCGATGCGCACCTGAAAGCTTTCTAGACCAT

BS06385.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:41:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG11095-RA 852 CG11095-PA 1..852 17..868 4260 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG11095-RA 1121 CG11095-RA 76..927 17..868 4260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:41:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13812112..13812676 304..868 2825 100 Plus
X 23542271 X 13811759..13812046 17..304 1440 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:41:52 has no hits.

BS06385.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:15:54 Download gff for BS06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG11095-RA 1..852 17..868 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:56:23 Download gff for BS06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG11095-RA 61..912 17..868 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:07 Download gff for BS06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG11095-RA 76..926 17..867 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:15:55 Download gff for BS06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG11095-RA 61..912 17..868 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:59 Download gff for BS06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG11095-RA 76..926 17..867 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:59 Download gff for BS06385.complete
Subject Subject Range Query Range Percent Splice Strand
X 13811759..13812045 17..303 100 -> Plus
X 13812112..13812675 304..867 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:07 Download gff for BS06385.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13705792..13706078 17..303 100 -> Plus
arm_X 13706145..13706708 304..867 100   Plus

BS06385.pep Sequence

Translation from 16 to 867

> BS06385.pep
MSLIAQASRTVPQLLLHLNRHLVTSCSSAASATSSKPPDVDQSITADQLL
GPESQRRCMEKMRSLPAFPRPKALTPSRREKQTSAVLIALCQERGTNEIS
LLYTRRSRHLRSHSFQISFPGGRRDDHDSSYVDCALRETEEEIGLPRHRI
QVWGEAKQLQLPRTSSIVPVVGVVPDFSLSELRLNWEEVEEAFSVPLTSL
MLPKATRHTQFRSGYSGPVFVVDHYRIWGITGYLTHLFLHCLLPPNLLPD
CLKTNIKFIRPFKLPPKLPHHREHSAGDPSMRT*

BS06385.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG11095-PA 283 CG11095-PA 1..283 1..283 1484 100 Plus