Clone BS06405 Report

Search the DGRC for BS06405

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:64
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptAdk2-RA
Protein status:BS06405.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06405.3prime Sequence

753 bp (752 high quality bases) assembled on 2005-12-03

> BS06405.3prime
ATGGTCTAGAAAGCTTTCATAACTGGATCTGGGCAGGACGCTTGCGTTGG
AATATAGAGTCGATGGTGGAGAAGACGTCGCTGGACTTCTTGGCGGCGTC
CACCTTGAAGTGCAGACCCCTCAGGCCGTAGTAGTCGACCAGCGGCTTTG
TCTGCTTGTGATATGCTTCCAGTCGCTTCTTCAGAGCCTCGGCGTTGTCA
TCGCTGCGACGGATTAGGGGCTCTCCAGTGACATCGTCCGTCATTGGCTT
CTTTGGAGGGGCAAACTCTTCGTGATACGAACGCCCGCTGGCCTGGTGGA
TCAAGCGGCCAGTGATGCGCCTCACCAACAGACTGTCGTCGATGGCAAAC
TCGATGACAGCATCCAAGTTGGTTTTCCTCTTGTCCAGCAATGTGTCGAG
CTTCTCAGCTTGAACGACAGTCCTGGGGAATCCGTCCAGGAGGAATCCGT
TCTTGCACTCGGGCTTGTCCAGGTTGGAGTCGATCATGTCCACGACCAGG
TCGTCGGAGACCAGTTTGCCGGCATCCATGACCTTCTTCAACTCGGCTCC
CAGCTTCGAACCGGATGAAATCTCCGCCCGCAGCATGTCGCCGGTCGACA
GGTGGCACACGCAGAACTTCTCCTTCAGCAGGGGAGCCTGCGTTCCTTTG
CCGGAACCCGGCGGCCCCAGGAGAATGGCGTTGATCCCGATGTTCTCAGG
CTCATATCGCTCCACTGGTACTGCTGCATTCGGCGCCATGTCGACTGATA
ACT

BS06405.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG3140-PA 723 Adk2-RA 1..723 739..17 3590 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:57:07
Subject Length Description Subject Range Query Range Score Percent Strand
Adk2-RA 1065 CG3140-RA 113..835 739..17 3600 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24024897..24025136 640..401 1185 99.6 Minus
2R 25286936 2R 24025432..24025647 232..17 1080 100 Minus
2R 25286936 2R 24025198..24025369 402..231 860 100 Minus
2R 25286936 2R 24024319..24024421 739..637 515 100 Minus
Blast to na_te.dros performed on 2015-02-12 00:57:05 has no hits.

BS06405.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:39:54 Download gff for BS06405.3prime
Subject Subject Range Query Range Percent Splice Strand
Adk2-PA 1..723 17..739 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:18:41 Download gff for BS06405.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3140-PA 1..723 17..739 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:49:16 Download gff for BS06405.3prime
Subject Subject Range Query Range Percent Splice Strand
Adk2-RA 105..838 10..746 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:35:53 Download gff for BS06405.3prime
Subject Subject Range Query Range Percent Splice Strand
Adk2-RA 105..838 10..746 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:35:53 Download gff for BS06405.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 24024311..24024420 638..746 97 -> Minus
2R 24024900..24025136 401..637 99 -> Minus
2R 24025200..24025367 233..400 100 -> Minus
2R 24025432..24025650 10..232 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:49:16 Download gff for BS06405.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19912723..19912890 233..400 100 -> Minus
arm_2R 19911834..19911943 638..746 97 -> Minus
arm_2R 19912423..19912659 401..637 99 -> Minus
arm_2R 19912955..19913173 10..232 98   Minus

BS06405.5prime Sequence

753 bp (752 high quality bases) assembled on 2005-12-03

> BS06405.5prime
GAAGTTATCAGTCGACATGGCGCCGAATGCAGCAGTACCAGTGGAGCGAT
ATGAGCCTGAGAACATCGGGATCAACGCCATTCTCCTGGGGCCGCCGGGT
TCCGGCAAAGGAACGCAGGCTCCCCTGCTGAAGGAGAAGTTCTGCGTGTG
CCACCTGTCGACCGGCGACATGCTGCGGGCGGAGATTTCATCCGGTTCGA
AGCTGGGAGCCGAGTTGAAGAAGGTCATGGATGCCGGCAAACTGGTCTCC
GACGACCTGGTCGTGGACATGATCGACTCCAACCTGGACAAGCCCGAGTG
CAAGAACGGATTCCTCCTGGACGGATTCCCCAGGACTGTCGTTCAAGCTG
AGAAGCTCGACACATTGCTGGACAAGAGGAAAACCAACTTGGATGCTGTC
ATCGAGTTTGCCATCGACGACAGTCTGTTGGTGAGGCGCATCACTGGCCG
CTTGATCCACCAGGCCAGCGGGCGTTCGTATCACGAAGAGTTTGCCCCTC
CAAAGAAGCCAATGACGGACGATGTCACTGGAGAGCCCCTAATCCGTCGC
AGCGATGACAACGCCGAGGCTCTGAAGAAGCGACTGGAAGCATATCACAA
GCAGACAAAGCCGCTGGTCGACTACTACGGCCTGAGGGGTCTGCACTTCA
AGGTGGACGCCGCCAAGAAGTCCAGCGACGTCTTCTCCACCATCGACTCT
ATATTCCAACGCAAGCGTCCTGCCCAGATCCAGTTATGAAAGCTTTCTAG
ACC

BS06405.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG3140-PA 723 Adk2-RA 1..723 17..739 3590 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
Adk2-RA 1065 CG3140-RA 113..835 17..739 3600 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24024897..24025136 116..355 1185 99.6 Plus
2R 25286936 2R 24025432..24025647 524..739 1080 100 Plus
2R 25286936 2R 24025198..24025369 354..525 860 100 Plus
2R 25286936 2R 24024319..24024421 17..119 515 100 Plus
Blast to na_te.dros performed on 2015-02-11 09:32:17 has no hits.

BS06405.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:39:55 Download gff for BS06405.5prime
Subject Subject Range Query Range Percent Splice Strand
Adk2-PA 1..723 17..739 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:18:43 Download gff for BS06405.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3140-PA 1..723 17..739 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:13:13 Download gff for BS06405.5prime
Subject Subject Range Query Range Percent Splice Strand
Adk2-RA 105..838 10..746 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:00:53 Download gff for BS06405.5prime
Subject Subject Range Query Range Percent Splice Strand
Adk2-RA 105..838 10..746 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:00:53 Download gff for BS06405.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24024311..24024420 10..118 97 -> Plus
2R 24024900..24025136 119..355 99 -> Plus
2R 24025200..24025367 356..523 100 -> Plus
2R 24025432..24025650 524..746 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:13:13 Download gff for BS06405.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19911834..19911943 10..118 97 -> Plus
arm_2R 19912423..19912659 119..355 99 -> Plus
arm_2R 19912723..19912890 356..523 100 -> Plus
arm_2R 19912955..19913173 524..746 98   Plus

BS06405.complete Sequence

755 bp (755 high quality bases) assembled on 2005-12-09

> BS06405.complete
GAAGTTATCAGTCGACATGGCGCCGAATGCAGCAGTACCAGTGGAGCGAT
ATGAGCCTGAGAACATCGGGATCAACGCCATTCTCCTGGGGCCGCCGGGT
TCCGGCAAAGGAACGCAGGCTCCCCTGCTGAAGGAGAAGTTCTGCGTGTG
CCACCTGTCGACCGGCGACATGCTGCGGGCGGAGATTTCATCCGGTTCGA
AGCTGGGAGCCGAGTTGAAGAAGGTCATGGATGCCGGCAAACTGGTCTCC
GACGACCTGGTCGTGGACATGATCGACTCCAACCTGGACAAGCCCGAGTG
CAAGAACGGATTCCTCCTGGACGGATTCCCCAGGACTGTCGTTCAAGCTG
AGAAGCTCGACACATTGCTGGACAAGAGGAAAACCAACTTGGATGCTGTC
ATCGAGTTTGCCATCGACGACAGTCTGTTGGTGAGGCGCATCACTGGCCG
CTTGATCCACCAGGCCAGCGGGCGTTCGTATCACGAAGAGTTTGCCCCTC
CAAAGAAGCCAATGACGGACGATGTCACTGGAGAGCCCCTAATCCGTCGC
AGCGATGACAACGCCGAGGCTCTGAAGAAGCGACTGGAAGCATATCACAA
GCAGACAAAGCCGCTGGTCGACTACTACGGCCTGAGGGGTCTGCACTTCA
AGGTGGACGCCGCCAAGAAGTCCAGCGACGTCTTCTCCACCATCGACTCT
ATATTCCAACGCAAGCGTCCTGCCCAGATCCAGTTATGAAAGCTTTCTAG
ACCAT

BS06405.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:19:27
Subject Length Description Subject Range Query Range Score Percent Strand
Adk2-RA 723 CG3140-PA 1..723 17..739 3600 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:19:29
Subject Length Description Subject Range Query Range Score Percent Strand
Adk2-RA 1065 CG3140-RA 113..835 17..739 3600 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24024897..24025136 116..355 1185 99.6 Plus
2R 25286936 2R 24025432..24025647 524..739 1080 100 Plus
2R 25286936 2R 24025198..24025369 354..525 860 100 Plus
2R 25286936 2R 24024319..24024421 17..119 515 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:19:26 has no hits.

BS06405.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:15:41 Download gff for BS06405.complete
Subject Subject Range Query Range Percent Splice Strand
Adk2-RA 1..723 17..739 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:56:06 Download gff for BS06405.complete
Subject Subject Range Query Range Percent Splice Strand
Adk2-RA 114..847 10..746 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:49:58 Download gff for BS06405.complete
Subject Subject Range Query Range Percent Splice Strand
Adk2-RA 113..834 17..738 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:15:41 Download gff for BS06405.complete
Subject Subject Range Query Range Percent Splice Strand
Adk2-RA 114..847 10..746 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:18:24 Download gff for BS06405.complete
Subject Subject Range Query Range Percent Splice Strand
Adk2-RA 113..834 17..738 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:18:24 Download gff for BS06405.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24024900..24025136 119..355 99 -> Plus
2R 24025200..24025367 356..523 100 -> Plus
2R 24024319..24024420 17..118 100 -> Plus
2R 24025432..24025646 524..738 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:49:58 Download gff for BS06405.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19911842..19911943 17..118 100 -> Plus
arm_2R 19912423..19912659 119..355 99 -> Plus
arm_2R 19912723..19912890 356..523 100 -> Plus
arm_2R 19912955..19913169 524..738 100   Plus

BS06405.pep Sequence

Translation from 16 to 738

> BS06405.pep
MAPNAAVPVERYEPENIGINAILLGPPGSGKGTQAPLLKEKFCVCHLSTG
DMLRAEISSGSKLGAELKKVMDAGKLVSDDLVVDMIDSNLDKPECKNGFL
LDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDSLLVRRITGRLIHQA
SGRSYHEEFAPPKKPMTDDVTGEPLIRRSDDNAEALKKRLEAYHKQTKPL
VDYYGLRGLHFKVDAAKKSSDVFSTIDSIFQRKRPAQIQL*

BS06405.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:09:26
Subject Length Description Subject Range Query Range Score Percent Strand
Adk2-PA 240 CG3140-PA 1..240 1..240 1228 100 Plus
Adk3-PD 216 CG6612-PD 8..190 21..209 345 39.2 Plus
Adk3-PC 216 CG6612-PC 8..190 21..209 345 39.2 Plus
Adk3-PA 216 CG6612-PA 8..190 21..209 345 39.2 Plus
Adk3-PB 216 CG6612-PB 8..190 21..209 345 39.2 Plus