Clone Sequence Records
BS06405.3prime Sequence
753 bp (752 high quality bases) assembled on 2005-12-03
> BS06405.3prime
ATGGTCTAGAAAGCTTTCATAACTGGATCTGGGCAGGACGCTTGCGTTGG
AATATAGAGTCGATGGTGGAGAAGACGTCGCTGGACTTCTTGGCGGCGTC
CACCTTGAAGTGCAGACCCCTCAGGCCGTAGTAGTCGACCAGCGGCTTTG
TCTGCTTGTGATATGCTTCCAGTCGCTTCTTCAGAGCCTCGGCGTTGTCA
TCGCTGCGACGGATTAGGGGCTCTCCAGTGACATCGTCCGTCATTGGCTT
CTTTGGAGGGGCAAACTCTTCGTGATACGAACGCCCGCTGGCCTGGTGGA
TCAAGCGGCCAGTGATGCGCCTCACCAACAGACTGTCGTCGATGGCAAAC
TCGATGACAGCATCCAAGTTGGTTTTCCTCTTGTCCAGCAATGTGTCGAG
CTTCTCAGCTTGAACGACAGTCCTGGGGAATCCGTCCAGGAGGAATCCGT
TCTTGCACTCGGGCTTGTCCAGGTTGGAGTCGATCATGTCCACGACCAGG
TCGTCGGAGACCAGTTTGCCGGCATCCATGACCTTCTTCAACTCGGCTCC
CAGCTTCGAACCGGATGAAATCTCCGCCCGCAGCATGTCGCCGGTCGACA
GGTGGCACACGCAGAACTTCTCCTTCAGCAGGGGAGCCTGCGTTCCTTTG
CCGGAACCCGGCGGCCCCAGGAGAATGGCGTTGATCCCGATGTTCTCAGG
CTCATATCGCTCCACTGGTACTGCTGCATTCGGCGCCATGTCGACTGATA
ACT
BS06405.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3140-PA | 723 | Adk2-RA | 1..723 | 739..17 | 3590 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:57:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-RA | 1065 | CG3140-RA | 113..835 | 739..17 | 3600 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:57:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24024897..24025136 | 640..401 | 1185 | 99.6 | Minus |
2R | 25286936 | 2R | 24025432..24025647 | 232..17 | 1080 | 100 | Minus |
2R | 25286936 | 2R | 24025198..24025369 | 402..231 | 860 | 100 | Minus |
2R | 25286936 | 2R | 24024319..24024421 | 739..637 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:57:05 has no hits.
BS06405.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:39:54 Download gff for
BS06405.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-PA | 1..723 | 17..739 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:18:41 Download gff for
BS06405.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3140-PA | 1..723 | 17..739 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:49:16 Download gff for
BS06405.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 105..838 | 10..746 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:35:53 Download gff for
BS06405.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 105..838 | 10..746 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:35:53 Download gff for
BS06405.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24024311..24024420 | 638..746 | 97 | -> | Minus |
2R | 24024900..24025136 | 401..637 | 99 | -> | Minus |
2R | 24025200..24025367 | 233..400 | 100 | -> | Minus |
2R | 24025432..24025650 | 10..232 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:49:16 Download gff for
BS06405.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19912723..19912890 | 233..400 | 100 | -> | Minus |
arm_2R | 19911834..19911943 | 638..746 | 97 | -> | Minus |
arm_2R | 19912423..19912659 | 401..637 | 99 | -> | Minus |
arm_2R | 19912955..19913173 | 10..232 | 98 | | Minus |
BS06405.5prime Sequence
753 bp (752 high quality bases) assembled on 2005-12-03
> BS06405.5prime
GAAGTTATCAGTCGACATGGCGCCGAATGCAGCAGTACCAGTGGAGCGAT
ATGAGCCTGAGAACATCGGGATCAACGCCATTCTCCTGGGGCCGCCGGGT
TCCGGCAAAGGAACGCAGGCTCCCCTGCTGAAGGAGAAGTTCTGCGTGTG
CCACCTGTCGACCGGCGACATGCTGCGGGCGGAGATTTCATCCGGTTCGA
AGCTGGGAGCCGAGTTGAAGAAGGTCATGGATGCCGGCAAACTGGTCTCC
GACGACCTGGTCGTGGACATGATCGACTCCAACCTGGACAAGCCCGAGTG
CAAGAACGGATTCCTCCTGGACGGATTCCCCAGGACTGTCGTTCAAGCTG
AGAAGCTCGACACATTGCTGGACAAGAGGAAAACCAACTTGGATGCTGTC
ATCGAGTTTGCCATCGACGACAGTCTGTTGGTGAGGCGCATCACTGGCCG
CTTGATCCACCAGGCCAGCGGGCGTTCGTATCACGAAGAGTTTGCCCCTC
CAAAGAAGCCAATGACGGACGATGTCACTGGAGAGCCCCTAATCCGTCGC
AGCGATGACAACGCCGAGGCTCTGAAGAAGCGACTGGAAGCATATCACAA
GCAGACAAAGCCGCTGGTCGACTACTACGGCCTGAGGGGTCTGCACTTCA
AGGTGGACGCCGCCAAGAAGTCCAGCGACGTCTTCTCCACCATCGACTCT
ATATTCCAACGCAAGCGTCCTGCCCAGATCCAGTTATGAAAGCTTTCTAG
ACC
BS06405.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:24:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3140-PA | 723 | Adk2-RA | 1..723 | 17..739 | 3590 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:32:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-RA | 1065 | CG3140-RA | 113..835 | 17..739 | 3600 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:32:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24024897..24025136 | 116..355 | 1185 | 99.6 | Plus |
2R | 25286936 | 2R | 24025432..24025647 | 524..739 | 1080 | 100 | Plus |
2R | 25286936 | 2R | 24025198..24025369 | 354..525 | 860 | 100 | Plus |
2R | 25286936 | 2R | 24024319..24024421 | 17..119 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:32:17 has no hits.
BS06405.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:39:55 Download gff for
BS06405.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-PA | 1..723 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:18:43 Download gff for
BS06405.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3140-PA | 1..723 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:13:13 Download gff for
BS06405.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 105..838 | 10..746 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:00:53 Download gff for
BS06405.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 105..838 | 10..746 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:00:53 Download gff for
BS06405.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24024311..24024420 | 10..118 | 97 | -> | Plus |
2R | 24024900..24025136 | 119..355 | 99 | -> | Plus |
2R | 24025200..24025367 | 356..523 | 100 | -> | Plus |
2R | 24025432..24025650 | 524..746 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:13:13 Download gff for
BS06405.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19911834..19911943 | 10..118 | 97 | -> | Plus |
arm_2R | 19912423..19912659 | 119..355 | 99 | -> | Plus |
arm_2R | 19912723..19912890 | 356..523 | 100 | -> | Plus |
arm_2R | 19912955..19913173 | 524..746 | 98 | | Plus |
BS06405.complete Sequence
755 bp (755 high quality bases) assembled on 2005-12-09
> BS06405.complete
GAAGTTATCAGTCGACATGGCGCCGAATGCAGCAGTACCAGTGGAGCGAT
ATGAGCCTGAGAACATCGGGATCAACGCCATTCTCCTGGGGCCGCCGGGT
TCCGGCAAAGGAACGCAGGCTCCCCTGCTGAAGGAGAAGTTCTGCGTGTG
CCACCTGTCGACCGGCGACATGCTGCGGGCGGAGATTTCATCCGGTTCGA
AGCTGGGAGCCGAGTTGAAGAAGGTCATGGATGCCGGCAAACTGGTCTCC
GACGACCTGGTCGTGGACATGATCGACTCCAACCTGGACAAGCCCGAGTG
CAAGAACGGATTCCTCCTGGACGGATTCCCCAGGACTGTCGTTCAAGCTG
AGAAGCTCGACACATTGCTGGACAAGAGGAAAACCAACTTGGATGCTGTC
ATCGAGTTTGCCATCGACGACAGTCTGTTGGTGAGGCGCATCACTGGCCG
CTTGATCCACCAGGCCAGCGGGCGTTCGTATCACGAAGAGTTTGCCCCTC
CAAAGAAGCCAATGACGGACGATGTCACTGGAGAGCCCCTAATCCGTCGC
AGCGATGACAACGCCGAGGCTCTGAAGAAGCGACTGGAAGCATATCACAA
GCAGACAAAGCCGCTGGTCGACTACTACGGCCTGAGGGGTCTGCACTTCA
AGGTGGACGCCGCCAAGAAGTCCAGCGACGTCTTCTCCACCATCGACTCT
ATATTCCAACGCAAGCGTCCTGCCCAGATCCAGTTATGAAAGCTTTCTAG
ACCAT
BS06405.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:19:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-RA | 723 | CG3140-PA | 1..723 | 17..739 | 3600 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:19:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-RA | 1065 | CG3140-RA | 113..835 | 17..739 | 3600 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:19:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24024897..24025136 | 116..355 | 1185 | 99.6 | Plus |
2R | 25286936 | 2R | 24025432..24025647 | 524..739 | 1080 | 100 | Plus |
2R | 25286936 | 2R | 24025198..24025369 | 354..525 | 860 | 100 | Plus |
2R | 25286936 | 2R | 24024319..24024421 | 17..119 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:19:26 has no hits.
BS06405.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:15:41 Download gff for
BS06405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 1..723 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:56:06 Download gff for
BS06405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 114..847 | 10..746 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:49:58 Download gff for
BS06405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 113..834 | 17..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:15:41 Download gff for
BS06405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 114..847 | 10..746 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:18:24 Download gff for
BS06405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 113..834 | 17..738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:18:24 Download gff for
BS06405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24024900..24025136 | 119..355 | 99 | -> | Plus |
2R | 24025200..24025367 | 356..523 | 100 | -> | Plus |
2R | 24024319..24024420 | 17..118 | 100 | -> | Plus |
2R | 24025432..24025646 | 524..738 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:49:58 Download gff for
BS06405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19911842..19911943 | 17..118 | 100 | -> | Plus |
arm_2R | 19912423..19912659 | 119..355 | 99 | -> | Plus |
arm_2R | 19912723..19912890 | 356..523 | 100 | -> | Plus |
arm_2R | 19912955..19913169 | 524..738 | 100 | | Plus |
BS06405.pep Sequence
Translation from 16 to 738
> BS06405.pep
MAPNAAVPVERYEPENIGINAILLGPPGSGKGTQAPLLKEKFCVCHLSTG
DMLRAEISSGSKLGAELKKVMDAGKLVSDDLVVDMIDSNLDKPECKNGFL
LDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDSLLVRRITGRLIHQA
SGRSYHEEFAPPKKPMTDDVTGEPLIRRSDDNAEALKKRLEAYHKQTKPL
VDYYGLRGLHFKVDAAKKSSDVFSTIDSIFQRKRPAQIQL*
BS06405.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:09:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-PA | 240 | CG3140-PA | 1..240 | 1..240 | 1228 | 100 | Plus |
Adk3-PD | 216 | CG6612-PD | 8..190 | 21..209 | 345 | 39.2 | Plus |
Adk3-PC | 216 | CG6612-PC | 8..190 | 21..209 | 345 | 39.2 | Plus |
Adk3-PA | 216 | CG6612-PA | 8..190 | 21..209 | 345 | 39.2 | Plus |
Adk3-PB | 216 | CG6612-PB | 8..190 | 21..209 | 345 | 39.2 | Plus |