Clone Sequence Records
BS06428.3prime Sequence
903 bp (859 high quality bases) assembled on 2005-12-03
> BS06428.3prime
ATGGTCTAGAAAGCTTTCATGATCGCTTGTAGGGCTTAAGAAGAGCCTTT
TGGCAGTAGCTGATCACTTCCTCAAGTTCCGAATCTTCACTCTTCACGAG
AAGTTCCTCAACTTGCAGAAACTTGAACTTTCCACGCTCCTGTGGCAAGC
AATTCCGGAATGCAATGGCCGCACAGTAGTCCTCCTGCAGTAAATGCTCC
TCGAAATGCCAATTGTCCATGGGTTGGTCGTGGCAACGCAGACTAGTACC
GATCAGAGGGGAAACATCTGTCTCCAAACTGCGAGTAGTGTCCACTGAGA
AGCTGATCTTTTGCAGATCTACAGTGATGCCAACACCCAGCTCCTTGACG
TACGCCTCCTTGAGACACCAGTGACGCATAAAGGCCTTCACCTGCTCCCG
TTCATCATGATGCGGTCTTCCAATATAACTCCATTCCTCCGCCGAAAATT
TGCTCTTCATCAGGCCAAAGAATTCCGACAGAGGCTTGCCACCATTGTAC
TCGATCTTCATGACATCTGTGCCGATTCCAAAGTCGGGATCACTGCTCTC
TCCTGCAATGCCCGCTAGAAGTACCAGGCTTCCCTGATGGGAGACATTGA
AGCTGAGAGGTGGCCCATCGTAGTCCTCCCCTTTCACCCAGTAAGGTTTA
CCCCTCACATCCCGGGCGAACTTCACTTCGGCCGACGGCAATCCGCTGCA
CGTGCTCACATATTTTCGCATGAAAAGACGACCAATTAGCGAGGACAGAA
AGTCATCGATAAAGTGGAACTTCATAAGCCGAGCTCGTTCCTCCGGTTGA
ATTGAGGCCACCGCCTGGCTCAGTTGAGGTAGTGTGGGCCTCCAGCTGCC
CAGGTCAAAGGCCCAGCGGGTGCAGATGTGTTTGCTCATGTCGACTGATA
ACT
BS06428.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:25:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32099-PA | 873 | eap-RA | 1..873 | 889..17 | 4365 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:28:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-RA | 1057 | CG32099-RA | 95..967 | 889..17 | 4365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:28:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12149367..12150239 | 889..17 | 4365 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:28:41 has no hits.
BS06428.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:40:38 Download gff for
BS06428.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-PA | 1..873 | 17..889 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:19:44 Download gff for
BS06428.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32099-PA | 1..873 | 17..889 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:05:19 Download gff for
BS06428.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..967 | 17..897 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:07:59 Download gff for
BS06428.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..967 | 17..897 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:07:59 Download gff for
BS06428.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12149360..12150239 | 17..897 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:05:19 Download gff for
BS06428.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12142460..12143339 | 17..897 | 99 | | Minus |
BS06428.5prime Sequence
903 bp (811 high quality bases) assembled on 2005-12-03
> BS06428.5prime
GAAGTTATCAGTCGACATGAGCAAACACATCTGCACCCGCTGGGCCTTTG
ACCTGGGCAGCTGGAGGCCCACACTACCTCAACTGAGCCAGGCGGTGGCC
TCAATTCAACCGGAGGAACGAGCTCGGCTTATGAAGTTCCACTTTATCGA
TGACTTTCTGTCCTCGCTAATTGGTCGTCTTTTCATGCGAAAATATGTGA
GCACGTGCAGCGGATTGCCGTCGGCCGAAGTGAAGTTCGCCCGGGATGTG
AGGGGTAAACCTTACTGGGTGAAAGGGGAGGACTACGATGGGCCACCTCT
CAGCTTCAATGTCTCCCATCAGGGAAGCCTGGTACTTCTAGCGGGCATTG
CAGGAGAGAGCAGTGATCCCGACTTTGGAATCGGCACAGATGTCATGAAG
ATCGAGTACAATGGTGGCAAGCCTCTGTCGGAATTCTTTGGCCTGATGAA
GAGCAAATTTTCGGCGGAGGAATGGAGTTATATTGGAAGACCGCATCATG
ATGAACGGGAGCAGGTGAAGGCCTTTATGCGTCACTGGTGTCTCAAGGAG
GCGTACGTCAAGGAGCTGGGTGTTGGCATCACTGTAGATCTGCAAAAGAT
CAGCTTCTCAGTGGACACTACTCGCAGTTTGGAGACAGATGTTTCCCCTC
TGATCGGTACTAGTCTGCGTTGCCACGACCAACCCATGGACAATTGGCAT
TTCGAGGAGCATTTACTGCAGGAGGACTACTGTGCGGCCATTGCATTCCG
GAATTGCTTGCCACAGGAGCGTGGAAAGTTCAAGTTTCTGCAAGTTGAGG
AACTTCTCGTGAAGAGTGAAGATTCGGAACTTGAGGAAGTGATCAGCTAC
TGCCAAAAGGCTCTTCTTAAGCCCTACAAGCGATCATGAAAGCTTTCTAG
ACC
BS06428.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:25:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32099-PA | 873 | eap-RA | 1..873 | 17..889 | 4365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:42:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-RA | 1057 | CG32099-RA | 95..967 | 17..889 | 4365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:42:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12149367..12150239 | 17..889 | 4365 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:42:21 has no hits.
BS06428.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:40:39 Download gff for
BS06428.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-PA | 1..873 | 17..889 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:19:46 Download gff for
BS06428.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32099-PA | 1..873 | 17..889 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:32:40 Download gff for
BS06428.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..967 | 9..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:35:15 Download gff for
BS06428.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..967 | 9..889 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:35:15 Download gff for
BS06428.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12149360..12150239 | 9..889 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:32:40 Download gff for
BS06428.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12142460..12143339 | 9..889 | 99 | | Plus |
BS06428.complete Sequence
905 bp (905 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635486
> BS06428.complete
GAAGTTATCAGTCGACATGAGCAAACACATCTGCACCCGCTGGGCCTTTG
ACCTGGGCAGCTGGAGGCCCACACTACCTCAACTGAGCCAGGCGGTGGCC
TCAATTCAACCGGAGGAACGAGCTCGGCTTATGAAGTTCCACTTTATCGA
TGACTTTCTGTCCTCGCTAATTGGTCGTCTTTTCATGCGAAAATATGTGA
GCACGTGCAGCGGATTGCCGTCGGCCGAAGTGAAGTTCGCCCGGGATGTG
AGGGGTAAACCTTACTGGGTGAAAGGGGAGGACTACGATGGGCCACCTCT
CAGCTTCAATGTCTCCCATCAGGGAAGCCTGGTACTTCTAGCGGGCATTG
CAGGAGAGAGCAGTGATCCCGACTTTGGAATCGGCACAGATGTCATGAAG
ATCGAGTACAATGGTGGCAAGCCTCTGTCGGAATTCTTTGGCCTGATGAA
GAGCAAATTTTCGGCGGAGGAATGGAGTTATATTGGAAGACCGCATCATG
ATGAACGGGAGCAGGTGAAGGCCTTTATGCGTCACTGGTGTCTCAAGGAG
GCGTACGTCAAGGAGCTGGGTGTTGGCATCACTGTAGATCTGCAAAAGAT
CAGCTTCTCAGTGGACACTACTCGCAGTTTGGAGACAGATGTTTCCCCTC
TGATCGGTACTAGTCTGCGTTGCCACGACCAACCCATGGACAATTGGCAT
TTCGAGGAGCATTTACTGCAGGAGGACTACTGTGCGGCCATTGCATTCCG
GAATTGCTTGCCACAGGAGCGTGGAAAGTTCAAGTTTCTGCAAGTTGAGG
AACTTCTCGTGAAGAGTGAAGATTCGGAACTTGAGGAAGTGATCAGCTAC
TGCCAAAAGGCTCTTCTTAAGCCCTACAAGCGATCATGAAAGCTTTCTAG
ACCAT
BS06428.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:01:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-RA | 873 | CG32099-PA | 1..873 | 17..889 | 4365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:01:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-RA | 1057 | CG32099-RA | 95..967 | 17..889 | 4365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:00:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12149367..12150239 | 17..889 | 4365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:01:00 has no hits.
BS06428.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:15:30 Download gff for
BS06428.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 1..873 | 17..889 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:55:53 Download gff for
BS06428.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..967 | 9..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:23 Download gff for
BS06428.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 95..966 | 17..888 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:15:31 Download gff for
BS06428.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..967 | 9..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:28 Download gff for
BS06428.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 95..966 | 17..888 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:28 Download gff for
BS06428.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12149367..12150238 | 17..888 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:23 Download gff for
BS06428.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12142467..12143338 | 17..888 | 100 | | Plus |
BS06428.pep Sequence
Translation from 16 to 888
> BS06428.pep
MSKHICTRWAFDLGSWRPTLPQLSQAVASIQPEERARLMKFHFIDDFLSS
LIGRLFMRKYVSTCSGLPSAEVKFARDVRGKPYWVKGEDYDGPPLSFNVS
HQGSLVLLAGIAGESSDPDFGIGTDVMKIEYNGGKPLSEFFGLMKSKFSA
EEWSYIGRPHHDEREQVKAFMRHWCLKEAYVKELGVGITVDLQKISFSVD
TTRSLETDVSPLIGTSLRCHDQPMDNWHFEEHLLQEDYCAAIAFRNCLPQ
ERGKFKFLQVEELLVKSEDSELEEVISYCQKALLKPYKRS*
BS06428.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:56:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-PA | 290 | CG32099-PA | 1..290 | 1..290 | 1543 | 100 | Plus |
