Clone Sequence Records
BS06431.3prime Sequence
705 bp (704 high quality bases) assembled on 2005-12-03
> BS06431.3prime
ATGGTCTAGAAAGCTTTCATGATGATGCCAAGTACCTGGTGACCTTCAGT
ATGCACAAATGCTCGCCAGGAATGCGTCGCTCCATGAACTTAACAGCCCG
GAACTGGAGGCCCTCTAAGTATTTGATAATCTCCTCCGGCTTGTTCTCCC
GCAGCAGGAGTAGGTAGAGCACGCCTCGAGGCGAAAGAATGTCATCCAAT
TGCTTGAGTAGAATGTCCGTGACGCGTCGCCCGTCCTGTCCACCAGCCCA
GGAGAAAACCAGATTGCGATCCGTTGAGGATTCGCTGTGCGAATCGAACT
GTTGCGTCTGCAGCTCCTCGTCACTGGTGACTACATAGGGCGGATTGAAG
AGCAGCACGTCCACGGATCGCGGACGCAGTGCATCCGCTAGGCTGCAGCG
AATGCTATCCAAGCGAGCGCCATTCCGAGTCGCAGTTCTTCGAGTGGCAT
TGCAGGCTTTGGGATTGATATCCGTAGCTAGGCACAGCGAAAAGCCAGCC
AGTTTCTTGGCCAGCGCCGTGATGATCACACCCGAACCGGAGCCCAGTTC
GACGCAGAGACTCGGCTGTAGCCGGTCCAGGTACTCCAGATCCTTTTCCA
GGGCATCCAGCAGCAGGAACGAGTCCTCCGCTGGCTCGTAAACGTGCTCG
AAATCTTCTGGGCTCAAGTGGTCGGTGTAGGGCGTCTCCATGTCGACTGA
TAACT
BS06431.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:25:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9960-PA | 675 | CG9960-RA | 1..675 | 691..17 | 3375 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 13:10:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snapin-RA | 1251 | CG9958-RA | 449..1128 | 696..17 | 3385 | 99.9 | Minus |
| CG9960-RA | 1251 | CG9960-RA | 449..1128 | 696..17 | 3385 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 13:10:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2758550..2759229 | 17..696 | 3385 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-03 13:10:48 has no hits.
BS06431.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:40:45 Download gff for
BS06431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-PA | 1..675 | 17..691 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:19:53 Download gff for
BS06431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-PA | 1..675 | 17..691 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:57:37 Download gff for
BS06431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 440..1130 | 12..705 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:47:26 Download gff for
BS06431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 440..1130 | 12..705 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:47:26 Download gff for
BS06431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2758548..2759237 | 12..705 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:57:37 Download gff for
BS06431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2758548..2759237 | 12..705 | 98 | | Plus |
BS06431.5prime Sequence
705 bp (704 high quality bases) assembled on 2005-12-03
> BS06431.5prime
GAAGTTATCAGTCGACATGGAGACGCCCTACACCGACCACTTGAGCCCAG
AAGATTTCGAGCACGTTTACGAGCCAGCGGAGGACTCGTTCCTGCTGCTG
GATGCCCTGGAAAAGGATCTGGAGTACCTGGACCGGCTACAGCCGAGTCT
CTGCGTCGAACTGGGCTCCGGTTCGGGTGTGATCATCACGGCGCTGGCCA
AGAAACTGGCTGGCTTTTCGCTGTGCCTAGCTACGGATATCAATCCCAAA
GCCTGCAATGCCACTCGAAGAACTGCGACTCGGAATGGCGCTCGCTTGGA
TAGCATTCGCTGCAGCCTAGCGGATGCACTGCGTCCGCGATCCGTGGACG
TGCTGCTCTTCAATCCGCCCTATGTAGTCACCAGTGACGAGGAGCTGCAG
ACGCAACAGTTCGATTCGCACAGCGAATCCTCAACGGATCGCAATCTGGT
TTTCTCCTGGGCTGGTGGACAGGACGGGCGACGCGTCACGGACATTCTAC
TCAAGCAATTGGATGACATTCTTTCGCCTCGAGGCGTGCTCTACCTACTC
CTGCTGCGGGAGAACAAGCCGGAGGAGATTATCAAATACTTAGAGGGCCT
CCAGTTCCGGGCTGTTAAGTTCATGGAGCGACGCATTCCTGGCGAGCATT
TGTGCATACTGAAGGTCACCAGGTACTTGGCATCATCATGAAAGCTTTCT
AGACC
BS06431.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:25:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9960-PA | 675 | CG9960-RA | 1..675 | 17..691 | 3375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:41:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snapin-RA | 1251 | CG9958-RA | 449..1128 | 12..691 | 3385 | 99.9 | Plus |
| CG9960-RA | 1251 | CG9960-RA | 449..1128 | 12..691 | 3385 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:41:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2758550..2759229 | 691..12 | 3385 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 14:41:56 has no hits.
BS06431.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:40:46 Download gff for
BS06431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-PA | 1..675 | 17..691 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:19:54 Download gff for
BS06431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-PA | 1..675 | 17..691 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:46:13 Download gff for
BS06431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 440..1130 | 2..696 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:05:27 Download gff for
BS06431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 440..1130 | 2..696 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:05:27 Download gff for
BS06431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2758548..2759238 | 2..696 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:46:13 Download gff for
BS06431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2758548..2759238 | 2..696 | 98 | | Minus |
BS06431.complete Sequence
707 bp (707 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635488
> BS06431.complete
GAAGTTATCAGTCGACATGGAGACGCCCTACACCGACCACTTGAGCCCAG
AAGATTTCGAGCACGTTTACGAGCCAGCGGAGGACTCGTTCCTGCTGCTG
GATGCCCTGGAAAAGGATCTGGAGTACCTGGACCGGCTACAGCCGAGTCT
CTGCGTCGAACTGGGCTCCGGTTCGGGTGTGATCATCACGGCGCTGGCCA
AGAAACTGGCTGGCTTTTCGCTGTGCCTAGCTACGGATATCAATCCCAAA
GCCTGCAATGCCACTCGAAGAACTGCGACTCGGAATGGCGCTCGCTTGGA
TAGCATTCGCTGCAGCCTAGCGGATGCACTGCGTCCGCGATCCGTGGACG
TGCTGCTCTTCAATCCGCCCTATGTAGTCACCAGTGACGAGGAGCTGCAG
ACGCAACAGTTCGATTCGCACAGCGAATCCTCAACGGATCGCAATCTGGT
TTTCTCCTGGGCTGGTGGACAGGACGGGCGACGCGTCACGGACATTCTAC
TCAAGCAATTGGATGACATTCTTTCGCCTCGAGGCGTGCTCTACCTACTC
CTGCTGCGGGAGAACAAGCCGGAGGAGATTATCAAATACTTAGAGGGCCT
CCAGTTCCGGGCTGTTAAGTTCATGGAGCGACGCATTCCTGGCGAGCATT
TGTGCATACTGAAGGTCACCAGGTACTTGGCATCATCATGAAAGCTTTCT
AGACCAT
BS06431.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:38:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9960-RA | 675 | CG9960-PA | 1..675 | 17..691 | 3375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:38:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snapin-RA | 1251 | CG9958-RA | 449..1128 | 12..691 | 3385 | 99.9 | Plus |
| CG9960-RA | 1251 | CG9960-RA | 449..1128 | 12..691 | 3385 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:38:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2758550..2759229 | 691..12 | 3385 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:38:53 has no hits.
BS06431.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:15:32 Download gff for
BS06431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 1..675 | 17..691 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:55:55 Download gff for
BS06431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snapin-RA | 473..1163 | 2..696 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:32:29 Download gff for
BS06431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 454..1127 | 17..690 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:15:32 Download gff for
BS06431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snapin-RA | 473..1163 | 2..696 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:36 Download gff for
BS06431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 454..1127 | 17..690 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:38:36 Download gff for
BS06431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2758551..2759224 | 17..690 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:32:29 Download gff for
BS06431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2758551..2759224 | 17..690 | 100 | | Minus |
BS06431.pep Sequence
Translation from 16 to 690
> BS06431.pep
METPYTDHLSPEDFEHVYEPAEDSFLLLDALEKDLEYLDRLQPSLCVELG
SGSGVIITALAKKLAGFSLCLATDINPKACNATRRTATRNGARLDSIRCS
LADALRPRSVDVLLFNPPYVVTSDEELQTQQFDSHSESSTDRNLVFSWAG
GQDGRRVTDILLKQLDDILSPRGVLYLLLLRENKPEEIIKYLEGLQFRAV
KFMERRIPGEHLCILKVTRYLASS*
BS06431.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:56:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9960-PA | 224 | CG9960-PA | 1..224 | 1..224 | 1146 | 100 | Plus |
