Clone Sequence Records
BS06442.3prime Sequence
819 bp (818 high quality bases) assembled on 2005-12-03
> BS06442.3prime
ATGGTCTAGAAAGCTTTTAGCCAAATCGGCGGCGGTAGTGGCGCCACATA
TCGCAGATGGCCGGCTTGAGCAGGCAGTTGCACTCGATGGGTCGAGGATC
CGGGAAGGGATCGCGTCGACACTCGGAGAAACTTGGATACTTGGTCTTGG
GTCTCTGGCCACAACGTCTAAAGGGACGACGGCACTTGGGCGGATCGCGG
GCGGCCACACAGCAGTTGGGCATTCTGAAGCGCGGACATTTCGATGATTC
CTTAACGCAGGGTTTGATGAGGTTAAGCTCCAGTTTGCCCAATACACACA
AATCCTCGGGGCAGCGGGGCTTTTTCGACTTGCGCTTGCGCCGCGGCATC
GGTGGCGGTACGGGGACGCAGTGGGCCTTCCGCTTCCGCCGCTTGACCAC
ACATTCGAACCAGGTGCGCGGATACTTTCGTTTGCCCATGTCCGAGGGCT
TATAGTGGGTGAGATCGATGGCCAACATCTCGGTGGCGCAGGGGTCTTCT
AAACAACTTTTGCGCGAATCGATAAAGGCGTGCATCTGAAACTCTGGATC
CGAACGGCACTTGTATTCGGTCCGCCGCGTCGTTTGCCAACAGGCATCGT
ATACCTTTGATCTGTCTTTCTTCTCCAACGGCTTTAGGTCCTTGCGCGGC
AGCAAGGGCGCCGGATAGCCACTCTCCCAGCCATCCTGGGAGTACAAATT
GCCCTCGGAGTTAAAGTGGCGAAACGAAGACGGAGGCAGAAAGCCTAAAA
CCTGCTTTTGCAGCAAGTGAGACATGCCAATCAGCGGTTTGCTTTTGGCA
AGCATGTCGACTGATAACT
BS06442.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:25:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4691-PA | 789 | CG4691-RA | 1..789 | 805..17 | 3945 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:28:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4691-RA | 1158 | CG4691-RA | 205..993 | 805..17 | 3945 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:27:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14760971..14761759 | 805..17 | 3945 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:28:00 has no hits.
BS06442.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:41:04 Download gff for
BS06442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-PA | 1..789 | 17..805 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:20:18 Download gff for
BS06442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-PA | 1..789 | 17..805 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:05:14 Download gff for
BS06442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..1000 | 11..805 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:07:12 Download gff for
BS06442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..1000 | 11..805 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:07:12 Download gff for
BS06442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14760972..14761766 | 11..804 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:05:14 Download gff for
BS06442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14760972..14761766 | 11..804 | 99 | | Minus |
BS06442.5prime Sequence
819 bp (818 high quality bases) assembled on 2005-12-03
> BS06442.5prime
GAAGTTATCAGTCGACATGCTTGCCAAAAGCAAACCGCTGATTGGCATGT
CTCACTTGCTGCAAAAGCAGGTTTTAGGCTTTCTGCCTCCGTCTTCGTTT
CGCCACTTTAACTCCGAGGGCAATTTGTACTCCCAGGATGGCTGGGAGAG
TGGCTATCCGGCGCCCTTGCTGCCGCGCAAGGACCTAAAGCCGTTGGAGA
AGAAAGACAGATCAAAGGTATACGATGCCTGTTGGCAAACGACGCGGCGG
ACCGAATACAAGTGCCGTTCGGATCCAGAGTTTCAGATGCACGCCTTTAT
CGATTCGCGCAAAAGTTGTTTAGAAGACCCCTGCGCCACCGAGATGTTGG
CCATCGATCTCACCCACTATAAGCCCTCGGACATGGGCAAACGAAAGTAT
CCGCGCACCTGGTTCGAATGTGTGGTCAAGCGGCGGAAGCGGAAGGCCCA
CTGCGTCCCCGTACCGCCACCGATGCCGCGGCGCAAGCGCAAGTCGAAAA
AGCCCCGCTGCCCCGAGGATTTGTGTGTATTGGGCAAACTGGAGCTTAAC
CTCATCAAACCCTGCGTTAAGGAATCATCGAAATGTCCGCGCTTCAGAAT
GCCCAACTGCTGTGTGGCCGCCCGCGATCCGCCCAAGTGCCGTCGTCCCT
TTAGACGTTGTGGCCAGAGACCCAAGACCAAGTATCCAAGTTTCTCCGAG
TGTCGACGCGATCCCTTCCCGGATCCTCGACCCATCGAGTGCAACTGCCT
GCTCAAGCCGGCCATCTGCGATATGTGGCGCCACTACCGCCGCCGATTTG
GCTAAAAGCTTTCTAGACC
BS06442.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:25:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4691-PA | 789 | CG4691-RA | 1..789 | 17..805 | 3945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:03:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4691-RA | 1158 | CG4691-RA | 205..993 | 17..805 | 3945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:03:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14760971..14761759 | 17..805 | 3945 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:03:48 has no hits.
BS06442.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:41:05 Download gff for
BS06442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-PA | 1..789 | 17..805 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:20:19 Download gff for
BS06442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-PA | 1..789 | 17..805 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:17:31 Download gff for
BS06442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..1000 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:47:00 Download gff for
BS06442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..1000 | 17..811 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:47:00 Download gff for
BS06442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14760972..14761766 | 18..811 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:17:31 Download gff for
BS06442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14760972..14761766 | 18..811 | 99 | | Plus |
BS06442.complete Sequence
821 bp (821 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635495
> BS06442.complete
GAAGTTATCAGTCGACATGCTTGCCAAAAGCAAACCGCTGATTGGCATGT
CTCACTTGCTGCAAAAGCAGGTTTTAGGCTTTCTGCCTCCGTCTTCGTTT
CGCCACTTTAACTCCGAGGGCAATTTGTACTCCCAGGATGGCTGGGAGAG
TGGCTATCCGGCGCCCTTGCTGCCGCGCAAGGACCTAAAGCCGTTGGAGA
AGAAAGACAGATCAAAGGTATACGATGCCTGTTGGCAAACGACGCGGCGG
ACCGAATACAAGTGCCGTTCGGATCCAGAGTTTCAGATGCACGCCTTTAT
CGATTCGCGCAAAAGTTGTTTAGAAGACCCCTGCGCCACCGAGATGTTGG
CCATCGATCTCACCCACTATAAGCCCTCGGACATGGGCAAACGAAAGTAT
CCGCGCACCTGGTTCGAATGTGTGGTCAAGCGGCGGAAGCGGAAGGCCCA
CTGCGTCCCCGTACCGCCACCGATGCCGCGGCGCAAGCGCAAGTCGAAAA
AGCCCCGCTGCCCCGAGGATTTGTGTGTATTGGGCAAACTGGAGCTTAAC
CTCATCAAACCCTGCGTTAAGGAATCATCGAAATGTCCGCGCTTCAGAAT
GCCCAACTGCTGTGTGGCCGCCCGCGATCCGCCCAAGTGCCGTCGTCCCT
TTAGACGTTGTGGCCAGAGACCCAAGACCAAGTATCCAAGTTTCTCCGAG
TGTCGACGCGATCCCTTCCCGGATCCTCGACCCATCGAGTGCAACTGCCT
GCTCAAGCCGGCCATCTGCGATATGTGGCGCCACTACCGCCGCCGATTTG
GCTAAAAGCTTTCTAGACCAT
BS06442.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:17:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4691-RA | 789 | CG4691-PA | 1..789 | 17..805 | 3945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:17:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4691-RA | 1158 | CG4691-RA | 205..993 | 17..805 | 3945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:17:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14760971..14761759 | 17..805 | 3945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:17:19 has no hits.
BS06442.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:15:20 Download gff for
BS06442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 1..789 | 17..805 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:55:42 Download gff for
BS06442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..1000 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:16 Download gff for
BS06442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..991 | 17..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:15:21 Download gff for
BS06442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..1000 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:10 Download gff for
BS06442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..991 | 17..803 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:10 Download gff for
BS06442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14760971..14761757 | 17..803 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:16 Download gff for
BS06442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14760971..14761757 | 17..803 | 100 | | Plus |
BS06442.pep Sequence
Translation from 16 to 804
> BS06442.pep
MLAKSKPLIGMSHLLQKQVLGFLPPSSFRHFNSEGNLYSQDGWESGYPAP
LLPRKDLKPLEKKDRSKVYDACWQTTRRTEYKCRSDPEFQMHAFIDSRKS
CLEDPCATEMLAIDLTHYKPSDMGKRKYPRTWFECVVKRRKRKAHCVPVP
PPMPRRKRKSKKPRCPEDLCVLGKLELNLIKPCVKESSKCPRFRMPNCCV
AARDPPKCRRPFRRCGQRPKTKYPSFSECRRDPFPDPRPIECNCLLKPAI
CDMWRHYRRRFG*
BS06442.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:35:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4691-PA | 262 | CG4691-PA | 1..262 | 1..262 | 1478 | 100 | Plus |
| boly-PA | 255 | CG30362-PA | 33..253 | 41..260 | 487 | 47.3 | Plus |
| CG8701-PA | 246 | CG8701-PA | 64..231 | 84..259 | 272 | 35.7 | Plus |
| CG2127-PB | 289 | CG2127-PB | 130..275 | 114..260 | 252 | 39.5 | Plus |
| CG2127-PA | 305 | CG2127-PA | 146..291 | 114..260 | 252 | 39.5 | Plus |
