Clone Sequence Records
BS06451.3prime Sequence
615 bp (614 high quality bases) assembled on 2005-12-03
> BS06451.3prime
ATGGTCTAGAAAGCTTCTATTTTTTGCGACCACGCACGGTGCTCTTCTTG
GGTGTTGATCGCTGGTTGCTCTTTCGGGTAGGACGCCGCGGACCATCGCC
TAAGTTCTCATCTGTCTCATAGTATCTGTACGTCCGGCGATTTGGTAGGG
CGTAGTCCAGGGCATGAGTGACCATTATCGCCTTGTAGGTGCACGCCACG
GACATGATAAGCTGCCCCAAATAGTAGACATCTTGGCGCAAAAACATAAA
GACTTTTGGATAGGCTTCAAAAAGGTACATGCCGGTACGAGTATTAACTG
CATTGTCCCGCAGTTTATTCATATGGCTGAGCAACTGGAGCCACACAAGC
ACCACGACCTGGGTGCACATATAGAAGACCAACAGTTCCAGCAGCAAAAG
CCAAAGCTTCTGCAGCGGTGCGCAATTCATTACCCTCAGATGATGGAGAA
AAAGCACGGCGGTCAGGACGAACAGCGCCGACGGAAGATCGGGAATATGC
TCCATGGGCAGCACATTGCATCCGGCGATGTATAGACACACGCATCCCAC
GCTGCCAGCCACCAGCTCCGTGACTTCGTACATTCCCTGTACAACCACCA
TGTCGACTGATAACT
BS06451.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:25:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-PA | 585 | CG10934-RA | 1..585 | 601..17 | 2925 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:01:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-RA | 1043 | CG10934-RA | 80..669 | 601..12 | 2950 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:01:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17722418..17723007 | 601..12 | 2950 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:01:22 has no hits.
BS06451.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:41:23 Download gff for
BS06451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-PA | 1..585 | 17..601 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:20:45 Download gff for
BS06451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-PA | 1..585 | 17..601 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:44:32 Download gff for
BS06451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..677 | 5..601 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:48 Download gff for
BS06451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..677 | 5..601 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:48 Download gff for
BS06451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17722418..17723015 | 5..601 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:44:32 Download gff for
BS06451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13609923..13610520 | 5..601 | 99 | | Minus |
BS06451.5prime Sequence
615 bp (614 high quality bases) assembled on 2005-12-03
> BS06451.5prime
GAAGTTATCAGTCGACATGGTGGTTGTACAGGGAATGTACGAAGTCACGG
AGCTGGTGGCTGGCAGCGTGGGATGCGTGTGTCTATACATCGCCGGATGC
AATGTGCTGCCCATGGAGCATATTCCCGATCTTCCGTCGGCGCTGTTCGT
CCTGACCGCCGTGCTTTTTCTCCATCATCTGAGGGTAATGAATTGCGCAC
CGCTGCAGAAGCTTTGGCTTTTGCTGCTGGAACTGTTGGTCTTCTATATG
TGCACCCAGGTCGTGGTGCTTGTGTGGCTCCAGTTGCTCAGCCATATGAA
TAAACTGCGGGACAATGCAGTTAATACTCGTACCGGCATGTACCTTTTTG
AAGCCTATCCAAAAGTCTTTATGTTTTTGCGCCAAGATGTCTACTATTTG
GGGCAGCTTATCATGTCCGTGGCGTGCACCTACAAGGCGATAATGGTCAC
TCATGCCCTGGACTACGCCCTACCAAATCGCCGGACGTACAGATACTATG
AGACAGATGAGAACTTAGGCGATGGTCCGCGGCGTCCTACCCGAAAGAGC
AACCAGCGATCAACACCCAAGAAGAGCACCGTGCGTGGTCGCAAAAAATA
GAAGCTTTCTAGACC
BS06451.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:25:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-PA | 585 | CG10934-RA | 1..585 | 17..601 | 2925 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:52:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-RA | 1043 | CG10934-RA | 80..669 | 17..606 | 2950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:52:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17722418..17723007 | 17..606 | 2950 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:52:41 has no hits.
BS06451.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:41:24 Download gff for
BS06451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-PA | 1..585 | 17..601 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:20:46 Download gff for
BS06451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-PA | 1..585 | 17..601 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:44:57 Download gff for
BS06451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..674 | 17..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:56:31 Download gff for
BS06451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..674 | 17..615 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:56:31 Download gff for
BS06451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17722418..17723012 | 17..615 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:44:57 Download gff for
BS06451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13609923..13610517 | 17..615 | 99 | | Plus |
BS06451.complete Sequence
617 bp (617 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635499
> BS06451.complete
GAAGTTATCAGTCGACATGGTGGTTGTACAGGGAATGTACGAAGTCACGG
AGCTGGTGGCTGGCAGCGTGGGATGCGTGTGTCTATACATCGCCGGATGC
AATGTGCTGCCCATGGAGCATATTCCCGATCTTCCGTCGGCGCTGTTCGT
CCTGACCGCCGTGCTTTTTCTCCATCATCTGAGGGTAATGAATTGCGCAC
CGCTGCAGAAGCTTTGGCTTTTGCTGCTGGAACTGTTGGTCTTCTATATG
TGCACCCAGGTCGTGGTGCTTGTGTGGCTCCAGTTGCTCAGCCATATGAA
TAAACTGCGGGACAATGCAGTTAATACTCGTACCGGCATGTACCTTTTTG
AAGCCTATCCAAAAGTCTTTATGTTTTTGCGCCAAGATGTCTACTATTTG
GGGCAGCTTATCATGTCCGTGGCGTGCACCTACAAGGCGATAATGGTCAC
TCATGCCCTGGACTACGCCCTACCAAATCGCCGGACGTACAGATACTATG
AGACAGATGAGAACTTAGGCGATGGTCCGCGGCGTCCTACCCGAAAGAGC
AACCAGCGATCAACACCCAAGAAGAGCACCGTGCGTGGTCGCAAAAAATA
GAAGCTTTCTAGACCAT
BS06451.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:17:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-RA | 585 | CG10934-PA | 1..585 | 17..601 | 2925 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:17:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-RA | 1043 | CG10934-RA | 80..669 | 17..606 | 2950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:17:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17722418..17723007 | 17..606 | 2950 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:17:38 has no hits.
BS06451.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:15:07 Download gff for
BS06451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 1..585 | 17..601 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:55:27 Download gff for
BS06451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..677 | 17..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:08:20 Download gff for
BS06451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..655 | 17..592 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:15:08 Download gff for
BS06451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..677 | 17..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:47 Download gff for
BS06451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10934-RA | 80..655 | 17..592 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:47 Download gff for
BS06451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17722418..17722993 | 17..592 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:08:20 Download gff for
BS06451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13609923..13610498 | 17..592 | 100 | | Plus |
BS06451.pep Sequence
Translation from 16 to 600
> BS06451.pep
MVVVQGMYEVTELVAGSVGCVCLYIAGCNVLPMEHIPDLPSALFVLTAVL
FLHHLRVMNCAPLQKLWLLLLELLVFYMCTQVVVLVWLQLLSHMNKLRDN
AVNTRTGMYLFEAYPKVFMFLRQDVYYLGQLIMSVACTYKAIMVTHALDY
ALPNRRTYRYYETDENLGDGPRRPTRKSNQRSTPKKSTVRGRKK*
BS06451.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10934-PA | 194 | CG10934-PA | 1..194 | 1..194 | 1019 | 100 | Plus |