Clone Sequence Records
BS06492.3prime Sequence
864 bp (863 high quality bases) assembled on 2005-12-03
> BS06492.3prime
ATGGTCTAGAAAGCTTTTAGAAGAGCTTGTAGTAGGCACTCTGAATATTG
GTTATCCAATCAATGTAGGCCGACACCTTGGTGTAAATGGAAGGCATGTT
GGCCAGTCCGCAGGGGATGTAGCCCCAGGATACGATGCCAATCAGCTCGG
AGGGGGCGTTTGTGAACTCAACAACCAGGGGGCCGCCGGAGTCACCGTTG
CATGCAGACTTGCTCTGTTGCAGGGAAGAGGAGCAGATGTTGGACTCAGC
GATAGGAGCGCTTTCCGGCAGCTCCTCCTTGCACTCCTCGTAGTTCAAAA
TTTGGGTGGTCACAGTCTGCAGGGTCTTGGCGCCCGAGAAGATGTAGGAC
TTTGGCTGTCCCCAACCGTACAGGTGGGTCTCTCCCTCATGGACTTGTTC
ACGGCTGGGCAAGGTGGCGGGCTGCACCCACTCGTTGAAGATGAAAGACT
CGTTCACGTGCAGCAGGGCAATGTCGTAGGGCCCAACGCCACCGGTGTAC
TTCTCGTGGACGCGGCCAAAGTCAACTTGGCGCTGCTGGGTCAGCTCATC
CACCTCGGCACGGGTGTGGAGTCCGGCAATGATGCTCATGCCTACTGGCT
CGGAAATGCAATGAGCAGCAGTCACAATCCAGTCCTTGTTAATCAAGGTG
CCTCCGCAGATGTGCGAGTGCTTCAAGTAGTTGGTCGCCAGGGAAACAAT
GTACGGGGCGGAGTGGGGTTCTGCCTCCGTGCCGTTGATCACGAAGCCGG
TCGCAAAGCTAGGCACGAGTTTGGCCAGCTTGTCGGAGAGCTTGGCTCCC
TGGGCGGCGGCCACAAGGGCAATAACCAAAGTCACAGTGATCAGTTTCAT
GTCGACTGATAACT
BS06492.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:26:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11911-PA | 834 | CG11911-RA | 1..834 | 850..17 | 4170 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:56:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11911-RA | 970 | CG11911-RA | 28..862 | 850..16 | 4175 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:56:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 320387..321221 | 16..850 | 4175 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:56:46 has no hits.
BS06492.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:42:45 Download gff for
BS06492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-PA | 1..834 | 17..850 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:22:34 Download gff for
BS06492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-PA | 1..834 | 17..850 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:43:43 Download gff for
BS06492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-RA | 19..862 | 16..860 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:02 Download gff for
BS06492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-RA | 19..862 | 16..860 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:02 Download gff for
BS06492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 320387..321230 | 16..860 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:43:43 Download gff for
BS06492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 320387..321230 | 16..860 | 99 | | Plus |
BS06492.5prime Sequence
864 bp (737 high quality bases) assembled on 2005-12-03
> BS06492.5prime
GAAGTTATCAGTCGACATGAAACTGATCACTGTGACTTTGGTTATTGCCC
TTGTGGCCGCCGCCCAGGGAGCCAAGCTCTCCGACAAGCTGGCCAAACTC
GTGCCTAGCTTTGCGACCGGCTTCGTGATCAACGGCACGGAGGCAGAACC
CCACTCCGCCCCGTACATTGTTTCCCTGGCGACCAACTACTTGAAGCACT
CGCACATCTGCGGAGGCACCTTGATTAACAAGGACTGGATTGTGACTGCT
GCTCATTGCATTTCCGAGCCAGTAGGCATGAGCATCATTGCCGGACTCCA
CACCCGTGCCGAGGTGGATGAGCTGACCCAGCAGCGCCAAGTTGACTTTG
GCCGCGTCCACGAGAAGTACACCGGTGGCGTTGGGCCCTACGACATTGCC
CTGCTGCACGTGAACGAGTCTTTCATCTTCAACGAGTGGGTGCAGCCCGC
CACCTTGCCCAGCCGTGAACAAGTCCATGAGGGAGAGACCCACCTGTACG
GTTGGGGACAGCCAAAGTCCTACATCTTCTCGGGCGCCAAGACCCTGCAG
ACTGTGACCACCCAAATTTTGAACTACGAGGAGTGCAAGGAGGAGCTGCC
GGAAAGCGCTCCTATCGCTGAGTCCAACATCTGCTCCTCTTCCCTGCAAC
AGAGCAAGTCTGCATGCAACGGTGACTCCGGCGGCCCCCTGGTTGTTGAG
TTCACAAACGCCCCCTCCGAGCTGATTGGCATCGTATCCTGGGGCTACAT
CCCCTGCGGACTGGCCAACATGCCTTCCATTTACACCAAGGTGTCGGCCT
ACATTGATTGGATAACCAATATTCAGAGTGCCTACTACAAGCTCTTCTAA
AAGCTTTCTAGACC
BS06492.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:26:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11911-PA | 834 | CG11911-RA | 1..834 | 17..850 | 4170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:32:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11911-RA | 970 | CG11911-RA | 28..862 | 17..851 | 4175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:32:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 320387..321221 | 851..17 | 4175 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 08:32:14 has no hits.
BS06492.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:42:45 Download gff for
BS06492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-PA | 1..834 | 17..850 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:22:35 Download gff for
BS06492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-PA | 1..834 | 17..850 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:16:56 Download gff for
BS06492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-RA | 19..862 | 7..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:27:53 Download gff for
BS06492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-RA | 19..862 | 7..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:27:53 Download gff for
BS06492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 320387..321230 | 7..851 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:16:56 Download gff for
BS06492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 320387..321230 | 7..851 | 99 | | Minus |
BS06492.complete Sequence
866 bp (866 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635522
> BS06492.complete
GAAGTTATCAGTCGACATGAAACTGATCACTGTGACTTTGGTTATTGCCC
TTGTGGCCGCCGCCCAGGGAGCCAAGCTCTCCGACAAGCTGGCCAAACTC
GTGCCTAGCTTTGCGACCGGCTTCGTGATCAACGGCACGGAGGCAGAACC
CCACTCCGCCCCGTACATTGTTTCCCTGGCGACCAACTACTTGAAGCACT
CGCACATCTGCGGAGGCACCTTGATTAACAAGGACTGGATTGTGACTGCT
GCTCATTGCATTTCCGAGCCAGTAGGCATGAGCATCATTGCCGGACTCCA
CACCCGTGCCGAGGTGGATGAGCTGACCCAGCAGCGCCAAGTTGACTTTG
GCCGCGTCCACGAGAAGTACACCGGTGGCGTTGGGCCCTACGACATTGCC
CTGCTGCACGTGAACGAGTCTTTCATCTTCAACGAGTGGGTGCAGCCCGC
CACCTTGCCCAGCCGTGAACAAGTCCATGAGGGAGAGACCCACCTGTACG
GTTGGGGACAGCCAAAGTCCTACATCTTCTCGGGCGCCAAGACCCTGCAG
ACTGTGACCACCCAAATTTTGAACTACGAGGAGTGCAAGGAGGAGCTGCC
GGAAAGCGCTCCTATCGCTGAGTCCAACATCTGCTCCTCTTCCCTGCAAC
AGAGCAAGTCTGCATGCAACGGTGACTCCGGCGGCCCCCTGGTTGTTGAG
TTCACAAACGCCCCCTCCGAGCTGATTGGCATCGTATCCTGGGGCTACAT
CCCCTGCGGACTGGCCAACATGCCTTCCATTTACACCAAGGTGTCGGCCT
ACATTGATTGGATAACCAATATTCAGAGTGCCTACTACAAGCTCTTCTAA
AAGCTTTCTAGACCAT
BS06492.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:27:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11911-RA | 834 | CG11911-PA | 1..834 | 17..850 | 4170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:27:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11911-RA | 970 | CG11911-RA | 28..862 | 17..851 | 4175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:27:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 320387..321221 | 851..17 | 4175 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:27:29 has no hits.
BS06492.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:14:55 Download gff for
BS06492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-RA | 1..834 | 17..850 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:55:12 Download gff for
BS06492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-RA | 17..860 | 7..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:10:43 Download gff for
BS06492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-RA | 28..859 | 17..848 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:14:55 Download gff for
BS06492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-RA | 17..860 | 7..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:19:14 Download gff for
BS06492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11911-RA | 28..859 | 17..848 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:19:14 Download gff for
BS06492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 320390..321221 | 17..848 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:10:43 Download gff for
BS06492.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 320390..321221 | 17..848 | 100 | | Minus |
BS06492.pep Sequence
Translation from 16 to 849
> BS06492.pep
MKLITVTLVIALVAAAQGAKLSDKLAKLVPSFATGFVINGTEAEPHSAPY
IVSLATNYLKHSHICGGTLINKDWIVTAAHCISEPVGMSIIAGLHTRAEV
DELTQQRQVDFGRVHEKYTGGVGPYDIALLHVNESFIFNEWVQPATLPSR
EQVHEGETHLYGWGQPKSYIFSGAKTLQTVTTQILNYEECKEELPESAPI
AESNICSSSLQQSKSACNGDSGGPLVVEFTNAPSELIGIVSWGYIPCGLA
NMPSIYTKVSAYIDWITNIQSAYYKLF*
BS06492.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11911-PA | 277 | CG11911-PA | 1..277 | 1..277 | 1451 | 100 | Plus |
CG7142-PA | 334 | CG7142-PA | 85..328 | 42..271 | 467 | 41.6 | Plus |
CG11912-PA | 271 | CG11912-PA | 23..270 | 30..272 | 459 | 39.9 | Plus |
CG33127-PA | 284 | CG33127-PA | 35..283 | 26..276 | 451 | 37.8 | Plus |
Phae1-PB | 270 | CG16996-PB | 34..264 | 35..267 | 409 | 37.2 | Plus |