Clone BS06585 Report

Search the DGRC for BS06585

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:65
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCG13601-RA
Protein status:BS06585.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06585.3prime Sequence

798 bp (755 high quality bases) assembled on 2005-12-03

> BS06585.3prime
ATGGTCTAGAAAGCTTTCAAAGGTCGGCTGCTTTTGTAGGCAGTGAGCTG
GCAACGGCAACGGTGGCTGCCTCTCCCAGAGACTGCTCCAGCTGCACGGC
CACCTCATCCAGGTGCTGGAGAGCCTCCTTGGCCTTGCGGTTGCGTCCGT
CCACGAAGATCTGCGTGTCCAGGAAGTGCAGGGCGCGGAAGGCCATACCG
CCTTGCGGGTCATATAAGCTGTCGAACTTTTTCGGATTCCTGGCGCTGGC
ACTCTGGTCCGGCGTGTCGGGATCGAAGGGCACGTATTCCTGAATCGGCT
CCTTGTGCCACCGGAAAATGTTTCGCGAATCTAGATCAGCCAGCACTCGC
GTCATTTCTCGTATCTGGGCATCCTGTCGCTCCAGCCGAAAGTTCATCTC
CGTCAGCATATTGGTTAGTTCCATCTTCTCCGATTGCGCCAACTCGTTTT
TCTTGTTCTCCTTGATGGTTTGACGTGAGTACTCGAAAATCAAAAGACCG
GCTCCGATCGAGAAGATGATGAACTCGCCAAGCAGATTGGCTCCCAGCTC
AATGGCCATCGCCTCGTTCAGCGGTGGAACATTAACGCGACCACCCATGT
TCAGGGCCCACATCTTGGTCTTCACCTCTACCCAGTTGTAGAACTGTGCG
GGCGGCATGCATATGTACTTCCTGAAGAAGGGGCTCGATTTGGCATTGGA
CTTAATCACGTTGGCTATCGGCTTGCTGACCTGCTTGATGGCCAAAATGC
CGAGCTTGGCCGCCGGGAAGACGCCAATAACCATGTCGACTGATAACT

BS06585.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:29:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG13601-PA 768 CG13601-RA 1..768 784..17 3840 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 01:24:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG13601-RB 1091 CG13601-RB 67..834 784..17 3840 100 Minus
CG13601-RA 1091 CG13601-RA 67..834 784..17 3840 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 01:24:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23926629..23926944 17..332 1580 100 Plus
3R 32079331 3R 23927203..23927371 474..642 845 100 Plus
3R 32079331 3R 23926998..23927145 327..474 725 99.3 Plus
3R 32079331 3R 23927427..23927568 643..784 710 100 Plus
Blast to na_te.dros performed on 2015-02-09 01:24:37 has no hits.

BS06585.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:45:51 Download gff for BS06585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13601-PA 1..768 17..784 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:26:34 Download gff for BS06585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13601-PA 1..768 17..784 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 05:54:22 Download gff for BS06585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13601-RA 67..834 17..784 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:08:28 Download gff for BS06585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13601-RA 67..834 17..784 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:08:28 Download gff for BS06585.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 23926629..23926942 17..330 100 <- Plus
3R 23927002..23927144 331..473 100 <- Plus
3R 23927203..23927371 474..642 100 <- Plus
3R 23927427..23927568 643..784 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 05:54:22 Download gff for BS06585.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19753149..19753290 643..784 100   Plus
arm_3R 19752351..19752664 17..330 100 <- Plus
arm_3R 19752724..19752866 331..473 100 <- Plus
arm_3R 19752925..19753093 474..642 100 <- Plus

BS06585.5prime Sequence

798 bp (797 high quality bases) assembled on 2005-12-03

> BS06585.5prime
GAAGTTATCAGTCGACATGGTTATTGGCGTCTTCCCGGCGGCCAAGCTCG
GCATTTTGGCCATCAAGCAGGTCAGCAAGCCGATAGCCAACGTGATTAAG
TCCAATGCCAAATCGAGCCCCTTCTTCAGGAAGTACATATGCATGCCGCC
CGCACAGTTCTACAACTGGGTAGAGGTGAAGACCAAGATGTGGGCCCTGA
ACATGGGTGGTCGCGTTAATGTTCCACCGCTGAACGAGGCGATGGCCATT
GAGCTGGGAGCCAATCTGCTTGGCGAGTTCATCATCTTCTCGATCGGAGC
CGGTCTTTTGATTTTCGAGTACTCACGTCAAACCATCAAGGAGAACAAGA
AAAACGAGTTGGCGCAATCGGAGAAGATGGAACTAACCAATATGCTGACG
GAGATGAACTTTCGGCTGGAGCGACAGGATGCCCAGATACGAGAAATGAC
GCGAGTGCTGGCTGATCTAGATTCGCGAAACATTTTCCGGTGGCACAAGG
AGCCGATTCAGGAATACGTGCCCTTCGATCCCGACACGCCGGACCAGAGT
GCCAGCGCCAGGAATCCGAAAAAGTTCGACAGCTTATATGACCCGCAAGG
CGGTATGGCCTTCCGCGCCCTGCACTTCCTGGACACGCAGATCTTCGTGG
ACGGACGCAACCGCAAGGCCAAGGAGGCTCTCCAGCACCTGGATGAGGTG
GCCGTGCAGCTGGAGCAGTCTCTGGGAGAGGCAGCCACCGTTGCCGTTGC
CAGCTCACTGCCTACAAAAGCAGCCGACCTTTGAAAGCTTTCTAGACC

BS06585.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG13601-PA 768 CG13601-RA 1..768 17..784 3840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG13601-RB 1091 CG13601-RB 67..834 17..784 3840 100 Plus
CG13601-RA 1091 CG13601-RA 67..834 17..784 3840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23926629..23926944 784..469 1580 100 Minus
3R 32079331 3R 23927203..23927371 327..159 845 100 Minus
3R 32079331 3R 23926998..23927145 474..327 725 99.3 Minus
3R 32079331 3R 23927427..23927568 158..17 710 100 Minus
Blast to na_te.dros performed on 2015-02-12 04:44:24 has no hits.

BS06585.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:45:53 Download gff for BS06585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13601-PA 1..768 17..784 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:26:35 Download gff for BS06585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13601-PA 1..768 17..784 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:09:39 Download gff for BS06585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13601-RA 67..834 17..784 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:13:54 Download gff for BS06585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13601-RA 67..834 17..784 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:13:54 Download gff for BS06585.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23926629..23926942 471..784 100 <- Minus
3R 23927002..23927144 328..470 100 <- Minus
3R 23927203..23927371 159..327 100 <- Minus
3R 23927427..23927568 17..158 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:09:39 Download gff for BS06585.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19752724..19752866 328..470 100 <- Minus
arm_3R 19752925..19753093 159..327 100 <- Minus
arm_3R 19753149..19753290 17..158 100   Minus
arm_3R 19752351..19752664 471..784 100 <- Minus

BS06585.complete Sequence

800 bp (800 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ635550

> BS06585.complete
GAAGTTATCAGTCGACATGGTTATTGGCGTCTTCCCGGCGGCCAAGCTCG
GCATTTTGGCCATCAAGCAGGTCAGCAAGCCGATAGCCAACGTGATTAAG
TCCAATGCCAAATCGAGCCCCTTCTTCAGGAAGTACATATGCATGCCGCC
CGCACAGTTCTACAACTGGGTAGAGGTGAAGACCAAGATGTGGGCCCTGA
ACATGGGTGGTCGCGTTAATGTTCCACCGCTGAACGAGGCGATGGCCATT
GAGCTGGGAGCCAATCTGCTTGGCGAGTTCATCATCTTCTCGATCGGAGC
CGGTCTTTTGATTTTCGAGTACTCACGTCAAACCATCAAGGAGAACAAGA
AAAACGAGTTGGCGCAATCGGAGAAGATGGAACTAACCAATATGCTGACG
GAGATGAACTTTCGGCTGGAGCGACAGGATGCCCAGATACGAGAAATGAC
GCGAGTGCTGGCTGATCTAGATTCGCGAAACATTTTCCGGTGGCACAAGG
AGCCGATTCAGGAATACGTGCCCTTCGATCCCGACACGCCGGACCAGAGT
GCCAGCGCCAGGAATCCGAAAAAGTTCGACAGCTTATATGACCCGCAAGG
CGGTATGGCCTTCCGCGCCCTGCACTTCCTGGACACGCAGATCTTCGTGG
ACGGACGCAACCGCAAGGCCAAGGAGGCTCTCCAGCACCTGGATGAGGTG
GCCGTGCAGCTGGAGCAGTCTCTGGGAGAGGCAGCCACCGTTGCCGTTGC
CAGCTCACTGCCTACAAAAGCAGCCGACCTTTGAAAGCTTTCTAGACCAT

BS06585.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:52:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13601-RB 834 CG13601-PB 1..768 17..784 3840 100 Plus
CG13601-RA 768 CG13601-PA 1..768 17..784 3840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:52:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG13601-RB 1091 CG13601-RB 67..834 17..784 3840 100 Plus
CG13601-RA 1091 CG13601-RA 67..834 17..784 3840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23926629..23926944 784..469 1580 100 Minus
3R 32079331 3R 23927203..23927371 327..159 845 100 Minus
3R 32079331 3R 23926998..23927145 474..327 725 99.3 Minus
3R 32079331 3R 23927427..23927568 158..17 710 100 Minus
Blast to na_te.dros performed on 2014-11-27 12:52:16 has no hits.

BS06585.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:14:28 Download gff for BS06585.complete
Subject Subject Range Query Range Percent Splice Strand
CG13601-RA 1..768 17..784 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:54:46 Download gff for BS06585.complete
Subject Subject Range Query Range Percent Splice Strand
CG13601-RA 65..832 17..784 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:25:12 Download gff for BS06585.complete
Subject Subject Range Query Range Percent Splice Strand
CG13601-RA 67..833 17..783 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:14:28 Download gff for BS06585.complete
Subject Subject Range Query Range Percent Splice Strand
CG13601-RA 65..832 17..784 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:06:26 Download gff for BS06585.complete
Subject Subject Range Query Range Percent Splice Strand
CG13601-RA 67..833 17..783 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:06:26 Download gff for BS06585.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23926630..23926942 471..783 100 <- Minus
3R 23927002..23927144 328..470 100 <- Minus
3R 23927203..23927371 159..327 100 <- Minus
3R 23927427..23927568 17..158 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:12 Download gff for BS06585.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19752724..19752866 328..470 100 <- Minus
arm_3R 19752925..19753093 159..327 100 <- Minus
arm_3R 19753149..19753290 17..158 100   Minus
arm_3R 19752352..19752664 471..783 100 <- Minus

BS06585.pep Sequence

Translation from 16 to 783

> BS06585.pep
MVIGVFPAAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYICMPPAQFYN
WVEVKTKMWALNMGGRVNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIF
EYSRQTIKENKKNELAQSEKMELTNMLTEMNFRLERQDAQIREMTRVLAD
LDSRNIFRWHKEPIQEYVPFDPDTPDQSASARNPKKFDSLYDPQGGMAFR
ALHFLDTQIFVDGRNRKAKEALQHLDEVAVQLEQSLGEAATVAVASSLPT
KAADL*

BS06585.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG13601-PA 255 CG13601-PA 1..255 1..255 1300 100 Plus
CG13601-PB 277 CG13601-PB 1..255 1..255 1300 100 Plus
CG43999-PC 166 CR43999-PC 1..153 1..153 315 38.6 Plus
CG43999-PB 166 CR43999-PB 1..153 1..153 315 38.6 Plus
CG43998-PD 153 CG43998-PD 1..152 1..152 264 35.5 Plus