Clone Sequence Records
BS06591.3prime Sequence
801 bp (794 high quality bases) assembled on 2005-12-03
> BS06591.3prime
ATGGTCTAGAAAGCTTTTACATCTGCCAGTGCATCGTGGGCGTAACCTCC
TTCAGCTGGCCCATGCTCACAATCCACATGCTGCCGTTCTTCATCATCTC
CATCGCGTGGATCATTTGCATGGCTGCCTCCTCGGGCATTTGGCGCTTGG
CGCTCTCGATGGCCTCCACCATGGATTCGGAGTGGTGCCAGGTAACGTTG
TCGCGCAGGTTCATAATCATCTCGCTGTTGGTGAGTCCCGGGCACATGGC
CATGAACATGACGCCGGTCTTTTGGTAGATCATCTTGTCGCCCATGGAGC
GGGTGAATCCGAGGATGCCGTGCATGGCAGCGGCGTAGACAGAAAAGGCG
GGCGCGGGTTCCAGGCCATAGACAGAGGACATGTTAACCACCATGCCACC
CATGCCCATCTGTGTCTTGTCCATGTAGGGCATGGCCATCATCGTCGACT
GGATCATGCCAGTCAGATTCATGCCCATCGTAGTCTCCACATCCTTGTCG
AGCAGGACACCCTCGCCATTGATCATCACATCAATGTGTCCCATCATTTG
ACCCATTTTCTTCATCGCCTGTTCGATCGACATCTTTTCCATGAGGTTCA
TTTGCATGAAGACCACTTTCACGGATGGATTAATGGCCTGCAGCTTCTTC
ATCATCTTAACGTTCTCCATGCGATGCATAATGCCCATCATCTTGATGTC
CTTCTGCATCAGCTGCATCATCATCTGCCATCCAATGCCGCTGAAGCTGC
CCACATAGACAACATTCTTACCGGTCCAGTCAAACATGTCGACTGATAAC
T
BS06591.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:29:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3763-PA | 771 | Fbp2-RA | 1..771 | 787..17 | 3855 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 01:24:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-RC | 871 | CG3763-RC | 65..836 | 787..16 | 3860 | 100 | Minus |
Fbp2-RB | 1074 | CG3763-RB | 152..923 | 787..16 | 3860 | 100 | Minus |
Fbp2-RA | 916 | CG3763-RA | 76..847 | 787..16 | 3860 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 01:24:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9427318..9427766 | 464..16 | 2245 | 100 | Minus |
2L | 23513712 | 2L | 9426935..9427258 | 787..464 | 1620 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 01:24:24 has no hits.
BS06591.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:46:04 Download gff for
BS06591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3763-PA | 1..771 | 17..787 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:26:49 Download gff for
BS06591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3763-PA | 1..771 | 17..787 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 05:54:20 Download gff for
BS06591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 11..794 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:08:27 Download gff for
BS06591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 11..794 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:08:27 Download gff for
BS06591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9426928..9427258 | 464..794 | 98 | -> | Minus |
2L | 9427319..9427772 | 11..463 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 05:54:20 Download gff for
BS06591.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9426928..9427258 | 464..794 | 98 | -> | Minus |
arm_2L | 9427319..9427772 | 11..463 | 99 | | Minus |
BS06591.5prime Sequence
801 bp (800 high quality bases) assembled on 2005-12-03
> BS06591.5prime
GAAGTTATCAGTCGACATGTTTGACTGGACCGGTAAGAATGTTGTCTATG
TGGGCAGCTTCAGCGGCATTGGATGGCAGATGATGATGCAGCTGATGCAG
AAGGACATCAAGATGATGGGCATTATGCATCGCATGGAGAACGTTAAGAT
GATGAAGAAGCTGCAGGCCATTAATCCATCCGTGAAAGTGGTCTTCATGC
AAATGAACCTCATGGAAAAGATGTCGATCGAACAGGCGATGAAGAAAATG
GGTCAAATGATGGGACACATTGATGTGATGATCAATGGCGAGGGTGTCCT
GCTCGACAAGGATGTGGAGACTACGATGGGCATGAATCTGACTGGCATGA
TCCAGTCGACGATGATGGCCATGCCCTACATGGACAAGACACAGATGGGC
ATGGGTGGCATGGTGGTTAACATGTCCTCTGTCTATGGCCTGGAACCCGC
GCCCGCCTTTTCTGTCTACGCCGCTGCCATGCACGGCATCCTCGGATTCA
CCCGCTCCATGGGCGACAAGATGATCTACCAAAAGACCGGCGTCATGTTC
ATGGCCATGTGCCCGGGACTCACCAACAGCGAGATGATTATGAACCTGCG
CGACAACGTTACCTGGCACCACTCCGAATCCATGGTGGAGGCCATCGAGA
GCGCCAAGCGCCAAATGCCCGAGGAGGCAGCCATGCAAATGATCCACGCG
ATGGAGATGATGAAGAACGGCAGCATGTGGATTGTGAGCATGGGCCAGCT
GAAGGAGGTTACGCCCACGATGCACTGGCAGATGTAAAAGCTTTCTAGAC
C
BS06591.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:29:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3763-PA | 771 | Fbp2-RA | 1..771 | 17..787 | 3855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:40:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-RC | 871 | CG3763-RC | 65..836 | 17..788 | 3860 | 100 | Plus |
Fbp2-RB | 1074 | CG3763-RB | 152..923 | 17..788 | 3860 | 100 | Plus |
Fbp2-RA | 916 | CG3763-RA | 76..847 | 17..788 | 3860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:40:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9427318..9427766 | 340..788 | 2245 | 100 | Plus |
2L | 23513712 | 2L | 9426935..9427258 | 17..340 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:40:19 has no hits.
BS06591.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:46:05 Download gff for
BS06591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3763-PA | 1..771 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:26:50 Download gff for
BS06591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3763-PA | 1..771 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:30:52 Download gff for
BS06591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 10..793 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:09:35 Download gff for
BS06591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 10..793 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:09:35 Download gff for
BS06591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9426928..9427258 | 10..340 | 98 | -> | Plus |
2L | 9427319..9427772 | 341..793 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:30:52 Download gff for
BS06591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9426928..9427258 | 10..340 | 98 | -> | Plus |
arm_2L | 9427319..9427772 | 341..793 | 99 | | Plus |
BS06591.complete Sequence
803 bp (803 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635553
> BS06591.complete
GAAGTTATCAGTCGACATGTTTGACTGGACCGGTAAGAATGTTGTCTATG
TGGGCAGCTTCAGCGGCATTGGATGGCAGATGATGATGCAGCTGATGCAG
AAGGACATCAAGATGATGGGCATTATGCATCGCATGGAGAACGTTAAGAT
GATGAAGAAGCTGCAGGCCATTAATCCATCCGTGAAAGTGGTCTTCATGC
AAATGAACCTCATGGAAAAGATGTCGATCGAACAGGCGATGAAGAAAATG
GGTCAAATGATGGGACACATTGATGTGATGATCAATGGCGAGGGTGTCCT
GCTCGACAAGGATGTGGAGACTACGATGGGCATGAATCTGACTGGCATGA
TCCAGTCGACGATGATGGCCATGCCCTACATGGACAAGACACAGATGGGC
ATGGGTGGCATGGTGGTTAACATGTCCTCTGTCTATGGCCTGGAACCCGC
GCCCGCCTTTTCTGTCTACGCCGCTGCCATGCACGGCATCCTCGGATTCA
CCCGCTCCATGGGCGACAAGATGATCTACCAAAAGACCGGCGTCATGTTC
ATGGCCATGTGCCCGGGACTCACCAACAGCGAGATGATTATGAACCTGCG
CGACAACGTTACCTGGCACCACTCCGAATCCATGGTGGAGGCCATCGAGA
GCGCCAAGCGCCAAATGCCCGAGGAGGCAGCCATGCAAATGATCCACGCG
ATGGAGATGATGAAGAACGGCAGCATGTGGATTGTGAGCATGGGCCAGCT
GAAGGAGGTTACGCCCACGATGCACTGGCAGATGTAAAAGCTTTCTAGAC
CAT
BS06591.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:30:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-RC | 771 | CG3763-PC | 1..771 | 17..787 | 3855 | 100 | Plus |
Fbp2-RB | 771 | CG3763-PB | 1..771 | 17..787 | 3855 | 100 | Plus |
Fbp2-RA | 771 | CG3763-PA | 1..771 | 17..787 | 3855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:30:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-RC | 871 | CG3763-RC | 65..836 | 17..788 | 3860 | 100 | Plus |
Fbp2-RB | 1074 | CG3763-RB | 152..923 | 17..788 | 3860 | 100 | Plus |
Fbp2-RA | 916 | CG3763-RA | 76..847 | 17..788 | 3860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:30:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9427318..9427766 | 340..788 | 2245 | 100 | Plus |
2L | 23513712 | 2L | 9426935..9427258 | 17..340 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:30:56 has no hits.
BS06591.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:14:19 Download gff for
BS06591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 1..771 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:54:35 Download gff for
BS06591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 10..793 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:54:07 Download gff for
BS06591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 82..844 | 23..785 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:14:19 Download gff for
BS06591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 69..853 | 10..793 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:20:13 Download gff for
BS06591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fbp2-RA | 82..844 | 23..785 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:20:13 Download gff for
BS06591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9426941..9427258 | 23..340 | 100 | -> | Plus |
2L | 9427319..9427763 | 341..785 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:54:07 Download gff for
BS06591.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9426941..9427258 | 23..340 | 100 | -> | Plus |
arm_2L | 9427319..9427763 | 341..785 | 100 | | Plus |
BS06591.pep Sequence
Translation from 16 to 786
> BS06591.pep
MFDWTGKNVVYVGSFSGIGWQMMMQLMQKDIKMMGIMHRMENVKMMKKLQ
AINPSVKVVFMQMNLMEKMSIEQAMKKMGQMMGHIDVMINGEGVLLDKDV
ETTMGMNLTGMIQSTMMAMPYMDKTQMGMGGMVVNMSSVYGLEPAPAFSV
YAAAMHGILGFTRSMGDKMIYQKTGVMFMAMCPGLTNSEMIMNLRDNVTW
HHSESMVEAIESAKRQMPEEAAMQMIHAMEMMKNGSMWIVSMGQLKEVTP
TMHWQM*
BS06591.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:20:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fbp2-PC | 256 | CG3763-PC | 1..256 | 1..256 | 1333 | 100 | Plus |
Fbp2-PB | 256 | CG3763-PB | 1..256 | 1..256 | 1333 | 100 | Plus |
Fbp2-PA | 256 | CG3763-PA | 1..256 | 1..256 | 1333 | 100 | Plus |
CG4842-PA | 259 | CG4842-PA | 2..254 | 3..255 | 494 | 36 | Plus |
CG18814-PB | 267 | CG18814-PB | 2..254 | 3..254 | 463 | 34.4 | Plus |