Clone Sequence Records
BS06627.3prime Sequence
793 bp (640 high quality bases) assembled on 2005-12-04
> BS06627.3prime
ATGGTCTAGAAAGCTTCTAGAAGCCGCTGGCCACAAATATCTTTTCCACC
TCCCCGAACACCTCTTCCGCATCCGGACTGGCATCGATCCGTTTCACCTG
GCCGGCGCCCTCGAAGAACTTGATGATGGGCAGCGAGTCGTTGTTGTATG
TCGAGATGCGCTTCTTCAGGCTGTCCAGGTTGTCGTCCGTCCGGCCAGAG
CCGCTCTGGCCGCGGCCCAGACACCGTTTGACGCACACATCCTCGCCGCA
GTCGAAGAAGAGGACAAACTGGAAGTCCACCTTCTCGGACATCTGGCGGT
TCCAACCGTCCAGATTATCCTGATTGCGTGGGAAGCCGTCGATGAGGAAC
CGCGACTTTCCCGACGCCTTCATGGCGTTCTCCAGCAGCGAACACGTGAC
CTCGACGGGCACAATTTTGCCATTGCGAATGTAGTCCTCGATGAGGTTAC
CGAATTCGGAGCCCTCCCGCGACCGCTCCTCGCGCAGGAGATCGCCGGCC
GAGAGATGGGTGAATTGGAAGCGATCCACGATCCTGGAGCATTGGGTGCC
CTTGCCGGCCCCGGGACCGCCCAAAACAAAGACAATCTTTGGCTTCTCTA
CGCTCATGATTCCGATATTGTGTGGTGGGGCTGTGGAGGTGGTGGGTGAT
GAACCTATTGCTGGCCTTGGAATGTCGCAATTGGTGCTGCGTCAGCGCTG
ATGGTGCGAGACCGACTCCTGGTGAACCGCAATCGTTGGCTACTGCTCTC
AACGTCGTTCGTGCCAAAGCCCGCCACATGTCGACTGATAACT
BS06627.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:29:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6092-PA | 762 | Dak1-RA | 134..762 | 645..17 | 3145 | 100 | Minus |
| CG6092-PA | 762 | Dak1-RA | 1..135 | 779..645 | 675 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:19:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-RA | 1202 | CG6092-RA | 93..865 | 788..16 | 3805 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:19:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26054574..26055336 | 16..779 | 3770 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:19:17 has no hits.
BS06627.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:47:11 Download gff for
BS06627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-PA | 1..762 | 17..779 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:28:18 Download gff for
BS06627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6092-PA | 1..762 | 17..779 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:35:24 Download gff for
BS06627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 89..869 | 9..793 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:42:13 Download gff for
BS06627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 89..869 | 9..793 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:42:13 Download gff for
BS06627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26054570..26055348 | 9..793 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:35:24 Download gff for
BS06627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21880292..21881070 | 9..793 | 98 | | Plus |
BS06627.5prime Sequence
792 bp (791 high quality bases) assembled on 2005-12-04
> BS06627.5prime
GAAGTTATCAGTCGACATGTGGCGGGCTTTGGCACGAACGACGTTGAGAG
CAGTAGCCAACGATTGCGGTTCACCAGGAGTCGGTCTCGCACCATCAGCG
CTGACGCAGCACCAATTGCGACATTCCAAGGCCAGCAATAGGTTCATCAC
CACCACCTCCACAGCCCCACCACACAATATCGGAATCATGAGCGTAGAGA
AGCCAAAGATTGTCTTTGTTTTGGGCGGTCCCGGGGCCGGCAAGGGCACC
CAATGCTCCAGGATCGTGGATCGCTTCCAATTCACCCATCTCTCGGCCGG
CGATCTCCTGCGCGAGGAGCGGTCGCGGGAGGGCTCCGAATTCGGTAACC
TCATCGAGGACTACATTCGCAATGGCAAAATTGTGCCCGTCGAGGTCACG
TGTTCGCTGCTGGAGAACGCCATGAAGGCGTCGGGAAAGTCGCGGTTCCT
CATCGACGGCTTCCCACGCAATCAGGATAATCTGGACGGTTGGAACCGCC
AGATGTCCGAGAAGGTGGACTTCCAGTTTGTCCTCTTCTTCGACTGCGGC
GAGGATGTGTGCGTCAAACGGTGTCTGGGCCGCGGCCAGAGCGGCTCTGG
CCGGACGGACGACAACCTGGACAGCCTGAAGAAGCGCATCTCGACATACA
ACAACGACTCGCTGCCCATCATCAAGTTCTTCGAGGGCGCCGGCCAGGTG
AAACGGATCGATGCCAGTCCGGATGCGGAAGAGGTGTTCGGGGAGGTGGA
AAAGATATTTGTGGCCAGCGGCTTCTAGAAGCTTTCTAGACC
BS06627.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:29:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6092-PA | 762 | Dak1-RA | 1..762 | 17..778 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:40:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-RA | 1202 | CG6092-RA | 93..865 | 8..779 | 3825 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:40:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26054574..26055336 | 779..17 | 3815 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 22:40:13 has no hits.
BS06627.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:47:13 Download gff for
BS06627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-PA | 1..762 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:28:20 Download gff for
BS06627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6092-PA | 1..762 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:27:08 Download gff for
BS06627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 93..869 | 8..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:47:21 Download gff for
BS06627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 93..869 | 8..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:47:21 Download gff for
BS06627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26054570..26055346 | 8..786 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:27:08 Download gff for
BS06627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21880292..21881068 | 8..786 | 99 | | Minus |
BS06627.complete Sequence
794 bp (794 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635568
> BS06627.complete
GAAGTTATCAGTCGACATGTGGCGGGCTTTGGCACGAACGACGTTGAGAG
CAGTAGCCAACGATTGCGGTTCACCAGGAGTCGGTCTCGCACCATCAGCG
CTGACGCAGCACCAATTGCGACATTCCAAGGCCAGCAATAGGTTCATCAC
CACCACCTCCACAGCCCCACCACACAATATCGGAATCATGAGCGTAGAGA
AGCCAAAGATTGTCTTTGTTTTGGGCGGTCCCGGGGCCGGCAAGGGCACC
CAATGCTCCAGGATCGTGGATCGCTTCCAATTCACCCATCTCTCGGCCGG
CGATCTCCTGCGCGAGGAGCGGTCGCGGGAGGGCTCCGAATTCGGTAACC
TCATCGAGGACTACATTCGCAATGGCAAAATTGTGCCCGTCGAGGTCACG
TGTTCGCTGCTGGAGAACGCCATGAAGGCGTCGGGAAAGTCGCGGTTCCT
CATCGACGGCTTCCCACGCAATCAGGATAATCTGGACGGTTGGAACCGCC
AGATGTCCGAGAAGGTGGACTTCCAGTTTGTCCTCTTCTTCGACTGCGGC
GAGGATGTGTGCGTCAAACGGTGTCTGGGCCGCGGCCAGAGCGGCTCTGG
CCGGACGGACGACAACCTGGACAGCCTGAAGAAGCGCATCTCGACATACA
ACAACGACTCGCTGCCCATCATCAAGTTCTTCGAGGGCGCCGGCCAGGTG
AAACGGATCGATGCCAGTCCGGATGCGGAAGAGGTGTTCGGGGAGGTGGA
AAAGATATTTGTGGCCAGCGGCTTCTAGAAGCTTTCTAGACCAT
BS06627.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:35:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-RA | 762 | CG6092-PA | 1..762 | 17..778 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:35:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-RA | 1202 | CG6092-RA | 103..865 | 17..779 | 3815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:35:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26054574..26055336 | 779..17 | 3815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:35:57 has no hits.
BS06627.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:05:32 Download gff for
BS06627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RB | 1..762 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:44:06 Download gff for
BS06627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sld5-RC | 1028..1804 | 8..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:39 Download gff for
BS06627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 103..864 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:05:32 Download gff for
BS06627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sld5-RC | 1028..1804 | 8..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:31 Download gff for
BS06627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 103..864 | 17..778 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:31 Download gff for
BS06627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26054575..26055336 | 17..778 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:39 Download gff for
BS06627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21880297..21881058 | 17..778 | 100 | | Minus |
BS06627.pep Sequence
Translation from 16 to 777
> BS06627.pep
MWRALARTTLRAVANDCGSPGVGLAPSALTQHQLRHSKASNRFITTTSTA
PPHNIGIMSVEKPKIVFVLGGPGAGKGTQCSRIVDRFQFTHLSAGDLLRE
ERSREGSEFGNLIEDYIRNGKIVPVEVTCSLLENAMKASGKSRFLIDGFP
RNQDNLDGWNRQMSEKVDFQFVLFFDCGEDVCVKRCLGRGQSGSGRTDDN
LDSLKKRISTYNNDSLPIIKFFEGAGQVKRIDASPDAEEVFGEVEKIFVA
SGF*
BS06627.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:41:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-PA | 253 | CG6092-PA | 1..253 | 1..253 | 1319 | 100 | Plus |
| Adk1-PA | 201 | CG17146-PA | 6..182 | 65..244 | 288 | 36.6 | Plus |
| Adk1-PB | 229 | CG17146-PB | 34..210 | 65..244 | 288 | 36.6 | Plus |
| Adk2-PA | 240 | CG3140-PA | 14..230 | 52..248 | 240 | 28.9 | Plus |
| CG9541-PC | 616 | CG9541-PC | 327..502 | 63..247 | 185 | 24.3 | Plus |
