Clone Sequence Records
BS06628.3prime Sequence
839 bp (815 high quality bases) assembled on 2005-12-04
> BS06628.3prime
ATGGTCTAGAAAGCTTTTATCCGTGACTATTCTGGAGACTGTGATGATTG
CTTAGATGCCTCATGTAGATATCCAAGTCATCTTCGCTAGATATAGCATT
CTCATCCGCAGCATGCTCCTCCAATTCCTCCTCGTCCTCGCTATCCTCAA
AGTAGGCATCTTCTTCATCCTGCTCAATTTGCTTCAGATCATCCAGCAAA
GTGTTATCATCTACGGCCTTATAATCAAAATCCTTGTCTTCGCCACTAAG
AAAGCGTTCCTTCATCATACTCAAGAACTCATTGCGTAGTAGTTCTCGCT
CTCCAGGATTATAGAACTCCGGTGTGGAGATCATAGTTGTATTCATTGGA
GCTCGGACTTCCGCATTTCGACTCGTTGAACAGGCCACTGGTTCATCATC
TTCAAATCCACCCCACTGCTTTCGGCAAGCGACAGGAACGTCACAGTCTG
CCTGAGGATTGGATTCACTTGTGACCTGCACGCTCTGCTTTCCTTCCTGC
TGCGTTTCCTCTAGTAATTCATCTCTTTGCTTTTTCTCCAACGTATGCAT
TAGTATTCCTGAGAAGCTAGTATTCCGAACATCGTAACTATCCCGAGCCT
TCTTTTCCGCCTCCGTTAGGTACTGACCCACTAGCTCCTGGTAGAGATCC
GGCGCCCTTTGCATCATCTCGTGTTCGCTAAAGTATTCTCCCTTGTCAAG
GAGCTGCTGCATGGCATGGTATCTTCGGTTTTTAATGGATACCGCACGAG
TGTTGAGTTTCCTCCTAAAATCCTCTAGCAGCAGGCACATCTCCTCCAGA
TTTTCATCTGCTTTAATGGGTTCCTTGACAGCCAGTTCC
BS06628.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:29:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-PA | 1095 | CG7810-RA | 273..1095 | 839..17 | 4115 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:39:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-RA | 1320 | CG7810-RA | 345..1167 | 839..17 | 4115 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:39:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8310029..8310851 | 17..839 | 4115 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:39:46 has no hits.
BS06628.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:47:14 Download gff for
BS06628.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-PA | 273..1095 | 17..839 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:28:21 Download gff for
BS06628.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-PA | 273..1095 | 17..839 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:14:37 Download gff for
BS06628.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 345..1167 | 17..839 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:46:20 Download gff for
BS06628.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 345..1167 | 17..839 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:46:20 Download gff for
BS06628.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8310029..8310851 | 17..839 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:14:37 Download gff for
BS06628.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8310029..8310851 | 17..839 | 100 | | Plus |
BS06628.5prime Sequence
888 bp (821 high quality bases) assembled on 2005-12-04
> BS06628.5prime
GAAGTTATCAGTCGACATGACAACTGGAAGCGATGCTGACGGGGATGGTG
ACCACCAGGGCAACAATGACATCGTCCCAAATCCAGAACATCCTCCGGAG
ATAATAGACATCTTCAAATCCTTGGCCGAAAACAATCAAATCGTCTTTAA
GTCGCAGCAAATTGATGATCCGGAAATTCCGGTCGAAGAGAAGCAACAAA
TAGCACGAGATGCCTTCGATAAGAACCGTGAGAACTTTCTCATCCGATTT
GGAGGCTTCCTGAATGTAAGACAACTGGGTTCCTTCCAGGAACTGGCTGT
CAAGGAACCCATTAAAGCAGATGAAAATCTGGAGGAGATGTGCCTGCTGC
TAGAGGATTTTAGGAGGAAACTCAACACTCGTGCGGTATCCATTAAAAAC
CGAAGATACCATGCCATGCAGCAGCTCCTTGACAAGGGAGAATACTTTAG
CGAACACGAGATGATGCAAAGGGCGCCGGATCTCTACCAGGAGCTAGTGG
GTCAGTACCTAACGGAGGCGGAAAAGAAGGCTCGGGATAGTTACGATGTT
CGGAATACTAGCTTCTCAGGAATACTAATGCATACGTTGGAGAAAAAGCA
AAGAGATGAATTACTAGAGGAAACGCAGCAGGAAGGAAAGCAGAGCGTGC
AGGTCACAAGTGAATCCAATCCTCAGGCAGACTGTGACGTTCCTGTCGCT
TGCCGAAAGCAGTGGGGTGGATTTGAAGATGATGAACCAGTGGCCTGTTC
AACGAGTCGAAATGCGGAAGTCCGAGCTCCAATGAATACAACTATGATCT
CCACACCGGAGTTCTATAATCCTGGAGAGCGAGAACTACTACGCAATGAG
TTCTTGAGTATGATGAAGGAACGCTTTCTTAGTGGCGA
BS06628.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:30:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-PA | 1095 | CG7810-RA | 1..872 | 17..888 | 4360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:31:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-RA | 1320 | CG7810-RA | 73..944 | 17..888 | 4360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:31:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8310252..8311123 | 888..17 | 4360 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:31:49 has no hits.
BS06628.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:47:15 Download gff for
BS06628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-PA | 1..871 | 17..887 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:28:23 Download gff for
BS06628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-PA | 1..871 | 17..887 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:12:50 Download gff for
BS06628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 73..943 | 17..887 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:59:54 Download gff for
BS06628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 73..943 | 17..887 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:59:54 Download gff for
BS06628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8310253..8311123 | 17..887 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:12:50 Download gff for
BS06628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8310253..8311123 | 17..887 | 100 | | Minus |
BS06628.complete Sequence
1127 bp (1127 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635569
> BS06628.complete
GAAGTTATCAGTCGACATGACAACTGGAAGCGATGCTGACGGGGATGGTG
ACCACCAGGGCAACAATGACATCGTCCCAAATCCAGAACATCCTCCGGAG
ATAATAGACATCTTCAAATCCTTGGCCGAAAACAATCAAATCGTCTTTAA
GTCGCAGCAAATTGATGATCCGGAAATTCCGGTCGAAGAGAAGCAACAAA
TAGCACGAGATGCCTTCGATAAGAACCGTGAGAACTTTCTCATCCGATTT
GGAGGCTTCCTGAATGTAAGACAACTGGGTTCCTTCCAGGAACTGGCTGT
CAAGGAACCCATTAAAGCAGATGAAAATCTGGAGGAGATGTGCCTGCTGC
TAGAGGATTTTAGGAGGAAACTCAACACTCGTGCGGTATCCATTAAAAAC
CGAAGATACCATGCCATGCAGCAGCTCCTTGACAAGGGAGAATACTTTAG
CGAACACGAGATGATGCAAAGGGCGCCGGATCTCTACCAGGAGCTAGTGG
GTCAGTACCTAACGGAGGCGGAAAAGAAGGCTCGGGATAGTTACGATGTT
CGGAATACTAGCTTCTCAGGAATACTAATGCATACGTTGGAGAAAAAGCA
AAGAGATGAATTACTAGAGGAAACGCAGCAGGAAGGAAAGCAGAGCGTGC
AGGTCACAAGTGAATCCAATCCTCAGGCAGACTGTGACGTTCCTGTCGCT
TGCCGAAAGCAGTGGGGTGGATTTGAAGATGATGAACCAGTGGCCTGTTC
AACGAGTCGAAATGCGGAAGTCCGAGCTCCAATGAATACAACTATGATCT
CCACACCGGAGTTCTATAATCCTGGAGAGCGAGAACTACTACGCAATGAG
TTCTTGAGTATGATGAAGGAACGCTTTCTTAGTGGCGAAGACAAGGATTT
TGATTATAAGGCCGTAGATGATAACACTTTGCTGGATGATCTGAAGCAAA
TTGAGCAGGATGAAGAAGATGCCTACTTTGAGGATAGCGAGGACGAGGAG
GAATTGGAGGAGCATGCTGCGGATGAGAATGCTATATCTAGCGAAGATGA
CTTGGATATCTACATGAGGCATCTAAGCAATCATCACAGTCTCCAGAATA
GTCACGGATAAAAGCTTTCTAGACCAT
BS06628.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:01:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-RA | 1095 | CG7810-PA | 1..1095 | 17..1111 | 5475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:01:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-RA | 1320 | CG7810-RA | 73..1167 | 17..1111 | 5475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:01:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8310029..8311123 | 1111..17 | 5475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:01:11 has no hits.
BS06628.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:12:20 Download gff for
BS06628.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 1..1095 | 17..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:52:13 Download gff for
BS06628.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 22..1116 | 17..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:45 Download gff for
BS06628.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 73..1165 | 17..1109 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:12:20 Download gff for
BS06628.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 22..1116 | 17..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:08:26 Download gff for
BS06628.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7810-RA | 73..1165 | 17..1109 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:08:26 Download gff for
BS06628.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8310031..8311123 | 17..1109 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:45 Download gff for
BS06628.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8310031..8311123 | 17..1109 | 100 | | Minus |
BS06628.pep Sequence
Translation from 16 to 1110
> BS06628.pep
MTTGSDADGDGDHQGNNDIVPNPEHPPEIIDIFKSLAENNQIVFKSQQID
DPEIPVEEKQQIARDAFDKNRENFLIRFGGFLNVRQLGSFQELAVKEPIK
ADENLEEMCLLLEDFRRKLNTRAVSIKNRRYHAMQQLLDKGEYFSEHEMM
QRAPDLYQELVGQYLTEAEKKARDSYDVRNTSFSGILMHTLEKKQRDELL
EETQQEGKQSVQVTSESNPQADCDVPVACRKQWGGFEDDEPVACSTSRNA
EVRAPMNTTMISTPEFYNPGERELLRNEFLSMMKERFLSGEDKDFDYKAV
DDNTLLDDLKQIEQDEEDAYFEDSEDEEELEEHAADENAISSEDDLDIYM
RHLSNHHSLQNSHG*
BS06628.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7810-PA | 364 | CG7810-PA | 1..364 | 1..364 | 1902 | 100 | Plus |