Clone BS06648 Report

Search the DGRC for BS06648

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:66
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptUgt35a-RA
Protein status:BS06648.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06648.3prime Sequence

906 bp (845 high quality bases) assembled on 2005-12-04

> BS06648.3prime
ATGGTCTAGAAAGCTTTTACTGGGTCTTCAATTTACTCGCCTCCGCACGA
TTTTTTCGGATTTTACTTATAAGCGAAACGAAGACCCTTTGTAAGCATTT
AATCAAAATAACGACGATCAGTAGGGAGACAAAAGTGATTGCGATGAGGA
GCCCCCAGGTGTCCAGTCCGTGGAACTGAATAAAATCCAGATCACGCGAA
GCACATCTCAAGTGTTTGGCTCCCTTATGCCGCAATACGTACTCGGTCCA
CCAAATGGCGCGCTCCAAAGCGGTTTCCTTCTGATCTCGGAATAATTTGG
ATTTAGTCTGAGCTGCTGCCGCATAACTGGGATTACTCAGCAATTCCTGG
ATCAAAGGCGTCAGTTCTGTCGCATTGACACTCCATATATCAGCACTGAG
ACCATAGCCTACCTGCTTGGCCCTCTGAACATTCAAGTGCTGATCATAGA
AAATGGGCAATCCAAGTATGGGCTTTCCAAAGTATATACTCTCGATGGTG
CTCAATAGACCTCCGTGGGTGATGAAGAGCTTAACATTCGGATGAGCGAG
AATATCGGGTTGGGGGAACCACTTGCTGATGAAGACATTATCGGGTTTTT
CGGGCAACTGATCATCCTCGAATTTCCACAGCACACGTTGTGGCACACTG
GCAAAGGTTTGCATTAGCATTTTTCGTGTGGATGGCGGCAAGTCTTTGCT
TTTGATATTGGAACCCATGGAGAAATAGATTACTCCCTTCTCCGATTGCT
CGACAAATTCCGACAGTTCCTTTGCTAAGGGCTGAACCTTTCGCTTCTGT
TGTAAATGCAGTCCGCCCACCTCGATCATATTGGGCAAATAGGGGCGTGG
ATAGCTCAGGGAAAAGTGCTGGCCGAGAAGCATTAGCGCAAAGCTGTCCA
AAACTT

BS06648.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:30:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG6644-PA 1614 Ugt35a-RA 725..1614 906..17 4450 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:07:41
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-RA 1781 CG6644-RA 765..1654 906..17 4450 100 Minus
Ugt86Dd-RB 1671 CG6633-RB 972..1191 634..415 395 78.6 Minus
Ugt35b-RA 1672 CG6649-RA 977..1148 660..489 335 79.7 Minus
Ugt86Dd-RB 1671 CG6633-RB 712..805 900..807 200 80.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11170944..11171833 17..906 4450 100 Plus
3R 32079331 3R 11127077..11127296 415..634 395 78.6 Plus
3R 32079331 3R 11169027..11169198 489..660 335 79.7 Plus
3R 32079331 3R 31394055..31394228 455..628 270 77 Plus
3R 32079331 3R 11164850..11165060 447..657 245 74.4 Plus
3R 32079331 3R 11127463..11127556 807..900 200 80.9 Plus
Blast to na_te.dros performed on 2015-02-10 19:07:40 has no hits.

BS06648.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:47:51 Download gff for BS06648.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6644-PA 725..1614 17..906 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:29:14 Download gff for BS06648.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6644-PA 725..1614 17..906 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:13:40 Download gff for BS06648.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 765..1654 17..906 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:27:44 Download gff for BS06648.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 765..1654 17..906 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:27:44 Download gff for BS06648.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11170944..11171833 17..906 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:13:40 Download gff for BS06648.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6996666..6997555 17..906 100   Plus

BS06648.5prime Sequence

924 bp (822 high quality bases) assembled on 2005-12-04

> BS06648.5prime
GAAGTTATCAGTCGACATGGGTGGAATATTTTCTGTAACTGGTCTTGGCA
TTCTGCTAATTGGCCTGATATGGCTGTTCGCCGCAAATGCCGATGAAGGG
GTTCAAAGTTCGCGCATATTGGCCGTGTTTCCTTTTCCCGGCCGATCGCA
GTACATTTTCGCTGAGCAGTTTATGAAGGAACTGGCCCATCGGGGTCACA
ATGTCACCGTAATCAATACCTTTGGTAGCGATAAAAACGAGCCCAACTTT
CGGGTGATTGGTGCTAAAAAAATTCACGAAATAATGGCGGCATTTGGAAA
TGCAGATTACACCCAAACGGCGAGTCAATGGCAAATGTTGACTATGACCA
CACAGTTTCTCAATCTTTTGACCACAAGTATCCTGGATGATGCGGCTGTA
AAGGATTTACTGAACAGCGGCGAGAAATTCGATTTGGTTATAATGGAAGC
GGTGCAAACCGAAGCCCTCTTCGGTTTGATCCAGCATTTTGGAGCAGAAA
CCATAGGTATCTCATCGTACGGCACAGATACACACATCGATGAGTTAATG
GGCAACATATCGCCATTGTCCTACAATCCCTTGCTACTCTCATCGCGAAC
GGAGCAAATGGATTTCAAGGATCGTGTGATGAATGTGTTTGAAGCCTCGG
TAATGTGGCTGCACAAGAGGATTGTCCACCTGCCGTCTCAACGGGATCTG
TATGCGAAATACTTTCCCACGGCCAGGAAATCATTGGATGAAGTTTTGGA
CAGCTTTGCGCTAATGCTTCTCGGCCAGCACTTTTCCCTGAGCTATCCAC
GCCCCTATTTGCCCAATATGATCGAGGTGGGCGGACTGCATTTACAACAG
AAGCGAAAGGTTCACCCCTTAGCAAAGGAACTGTCGGAATTTGTCGAGCA
ATCGGAGAAGGGAGTAATCTATTT

BS06648.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:30:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG6644-PA 1614 Ugt35a-RA 1..908 17..924 4515 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:28:33
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-RA 1781 CG6644-RA 41..948 17..924 4525 99.9 Plus
Ugt86Dd-RB 1671 CG6633-RB 700..805 735..840 215 80.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11171650..11172284 924..290 3160 99.8 Minus
3R 32079331 3R 11172351..11172624 290..17 1370 100 Minus
3R 32079331 3R 11127463..11127568 840..735 215 80.2 Minus
Blast to na_te.dros performed on 2015-02-11 09:28:32 has no hits.

BS06648.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:47:52 Download gff for BS06648.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6644-PA 1..908 17..924 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:29:15 Download gff for BS06648.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6644-PA 1..908 17..924 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:11:21 Download gff for BS06648.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..948 17..924 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:53:15 Download gff for BS06648.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..948 17..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:53:15 Download gff for BS06648.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11171650..11172283 291..924 99 <- Minus
3R 11172351..11172624 17..290 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:11:21 Download gff for BS06648.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6997372..6998005 291..924 99 <- Minus
arm_3R 6998073..6998346 17..290 100   Minus

BS06648.complete Sequence

1646 bp (1646 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635577

> BS06648.complete
GAAGTTATCAGTCGACATGGGTGGAATATTTTCTGTAACTGGTCTTGGCA
TTCTGCTAATTGGCCTGATATGGCTGTTCGCCGCAAATGCCGATGAAGGG
GTTCAAAGTTCGCGCATATTGGCCGTGTTTCCTTTTCCCGGCCGATCGCA
GTACATTTTCGCTGAGCAGTTTATGAAGGAACTGGCCCATCGGGGTCACA
ATGTCACCGTAATCAATACCTTTGGTAGCGATAAAAACGAGCCCAACTTT
CGGGTGATTGGTGCTAAAAAAATTCACGAAATAATGGCGGCATTTGGAAA
TGCAGATTACACCCAAACGGCGAGTCAATGGCAAATGTTGACTATGACCA
CACAGTTTCTCAATCTTTTGACCACAAGTATCCTGGATGATGCGGCTGTA
AAGGATTTACTGAACAGCGGCGAGAAATTCGATTTGGTTATAATGGAAGC
GGTGCAAACCGAAGCCCTCTTCGGTTTGATCCAGCATTTTGGAGCAGAAA
CCATAGGTATCTCATCGTACGGCACAGATACACACATCGATGAGTTAATG
GGCAACATATCGCCATTGTCCTACAATCCCTTGCTACTCTCATCGCGAAC
GGAGCAAATGGATTTCAAGGATCGTGTGATGAATGTGTTTGAAGCCTCGG
TAATGTGGCTGCACAAGAGGATTGTCCACCTGCCGTCTCAACGGGATCTG
TATGCGAAATACTTTCCCACGGCCAGGAAATCATTGGATGAAGTTTTGGA
CAGCTTTGCGCTAATGCTTCTCGGCCAGCACTTTTCCCTGAGCTATCCAC
GCCCCTATTTGCCCAATATGATCGAGGTGGGCGGACTGCATTTACAACAG
AAGCGAAAGGTTCAGCCCTTAGCAAAGGAACTGTCGGAATTTGTCGAGCA
ATCGGAGAAGGGAGTAATCTATTTCTCCATGGGTTCCAATATCAAAAGCA
AAGACTTGCCGCCATCCACACGAAAAATGCTAATGCAAACCTTTGCCAGT
GTGCCACAACGTGTGCTGTGGAAATTCGAGGATGATCAGTTGCCCGAAAA
ACCCGATAATGTCTTCATCAGCAAGTGGTTCCCCCAACCCGATATTCTCG
CTCATCCGAATGTTAAGCTCTTCATCACCCACGGAGGTCTATTGAGCACC
ATCGAGAGTATATACTTTGGAAAGCCCATACTTGGATTGCCCATTTTCTA
TGATCAGCACTTGAATGTTCAGAGGGCCAAGCAGGTAGGCTATGGTCTCA
GTGCTGATATATGGAGTGTCAATGCGACAGAACTGACGCCTTTGATCCAG
GAATTGCTGAGTAATCCCAGTTATGCGGCAGCAGCTCAGACTAAATCCAA
ATTATTCCGAGATCAGAAGGAAACCGCTTTGGAGCGCGCCATTTGGTGGA
CCGAGTACGTATTGCGGCATAAGGGAGCCAAACACTTGAGATGTGCTTCG
CGTGATCTGGATTTTATTCAGTTCCACGGACTGGACACCTGGGGGCTCCT
CATCGCAATCACTTTTGTCTCCCTACTGATCGTCGTTATTTTGATTAAAT
GCTTACAAAGGGTCTTCGTTTCGCTTATAAGTAAAATCCGAAAAAATCGT
GCGGAGGCGAGTAAATTGAAGACCCAGTAAAAGCTTTCTAGACCAT

BS06648.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:40:17
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-RA 1614 CG6644-PA 1..1614 17..1630 8070 100 Plus
Ugt86Dd-RB 1553 CG6633-PB 957..1176 1013..1232 395 78.6 Plus
Ugt35b-RA 1551 CG6649-PA 941..1112 987..1158 335 79.7 Plus
Ugt86Dd-RB 1553 CG6633-PB 685..790 735..840 215 80.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-RA 1781 CG6644-RA 41..1654 17..1630 8070 100 Plus
Ugt86Dd-RB 1671 CG6633-RB 972..1191 1013..1232 395 78.6 Plus
Ugt35b-RA 1672 CG6649-RA 977..1148 987..1158 335 79.7 Plus
Ugt86Dd-RB 1671 CG6633-RB 700..805 735..840 215 80.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:40:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11170944..11172284 1630..290 6705 100 Minus
3R 32079331 3R 11172351..11172624 290..17 1370 100 Minus
3R 32079331 3R 11127077..11127296 1232..1013 395 78.6 Minus
3R 32079331 3R 11169027..11169198 1158..987 335 79.7 Minus
3R 32079331 3R 31394055..31394228 1192..1019 270 77 Minus
3R 32079331 3R 11164850..11165060 1200..990 245 74.4 Minus
3R 32079331 3R 11127463..11127568 840..735 215 80.2 Minus
Blast to na_te.dros performed on 2014-11-28 00:40:16 has no hits.

BS06648.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:12:14 Download gff for BS06648.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 1..1614 17..1630 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:52:06 Download gff for BS06648.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..1654 17..1630 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:29:15 Download gff for BS06648.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..1652 17..1628 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:12:14 Download gff for BS06648.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..1654 17..1630 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:36:00 Download gff for BS06648.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt35a-RA 41..1652 17..1628 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:36:00 Download gff for BS06648.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11170946..11172283 291..1628 100 <- Minus
3R 11172351..11172624 17..290 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:29:15 Download gff for BS06648.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6996668..6998005 291..1628 100 <- Minus
arm_3R 6998073..6998346 17..290 100   Minus

BS06648.pep Sequence

Translation from 16 to 1629

> BS06648.pep
MGGIFSVTGLGILLIGLIWLFAANADEGVQSSRILAVFPFPGRSQYIFAE
QFMKELAHRGHNVTVINTFGSDKNEPNFRVIGAKKIHEIMAAFGNADYTQ
TASQWQMLTMTTQFLNLLTTSILDDAAVKDLLNSGEKFDLVIMEAVQTEA
LFGLIQHFGAETIGISSYGTDTHIDELMGNISPLSYNPLLLSSRTEQMDF
KDRVMNVFEASVMWLHKRIVHLPSQRDLYAKYFPTARKSLDEVLDSFALM
LLGQHFSLSYPRPYLPNMIEVGGLHLQQKRKVQPLAKELSEFVEQSEKGV
IYFSMGSNIKSKDLPPSTRKMLMQTFASVPQRVLWKFEDDQLPEKPDNVF
ISKWFPQPDILAHPNVKLFITHGGLLSTIESIYFGKPILGLPIFYDQHLN
VQRAKQVGYGLSADIWSVNATELTPLIQELLSNPSYAAAAQTKSKLFRDQ
KETALERAIWWTEYVLRHKGAKHLRCASRDLDFIQFHGLDTWGLLIAITF
VSLLIVVILIKCLQRVFVSLISKIRKNRAEASKLKTQ*

BS06648.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:30
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt35a-PA 537 CG6644-PA 1..537 1..537 2760 100 Plus
Ugt86Dd-PB 517 CG6633-PB 22..496 30..509 1422 56.2 Plus
Ugt35b-PA 516 CG6649-PA 17..503 29..516 1250 51.5 Plus
CG31002-PA 521 CG31002-PA 16..506 30..513 1052 44.6 Plus
Ugt86Da-PA 528 CG18578-PA 22..526 29..530 1013 43 Plus