Clone BS06650 Report

Search the DGRC for BS06650

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:66
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptTao-RA
Protein status:BS06650.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06650.3prime Sequence

991 bp (884 high quality bases) assembled on 2005-12-04

> BS06650.3prime
ATGGTCTAGAAAGCTTCTATAGCGAACCAGCCGGAAAACTTGTTGAACTA
TTGCTATGGGCTAAACTAATCATTGAACCAGACAGACTTCCCTCCTCATC
TGCATAGGCTTCTCGGGATACCTCAATCAGAGATAAAGTGCTGAAACCTA
GGGCAATTGATTCGTTATCAAATGCTTCCAATTCTTTAGTATGCTTCTCG
TGTTTCATGCGCAAGCGCTCGGCGCGTTCCTGGTTGAATTGCTGCAACTC
GGCGTCCATCTTATTCTCGAGCAGGCCACGCCGCACGCTGACGCGATTCT
CGAGCTCACGACGCTCGCGATCGCGCTGCTCCTGTGCCTGCTTCTTGTTC
TTGTTCTGGTAGGCAGTGAGCATCTCCAGCTCGTACTCCAGCTGCTCGTG
GGTACGTTGGCACTCAATCACTTGGCTTTCGTCTAGTTTGTAGCTCTGAC
TTTGGAACATGTCCGCAATGCTTTGCTCGTACTGTTCACCGAGCAGCGTC
AGCTTGCGATGCTTCTCTTCCTTCAGCTGCTTAATGACCTCCTTCTGTTG
CTCCTTTGGTGTCGTCTGCAGTACTTGGGCCTTGTAGCGTTTGTATTGCT
TCGTCTGCGTCTTGCATGTTTCCCGGAACTGCTTGCGTATCTGGAGCTCC
TTTTGCTTCAAGCTCTTCGGCTGTTGCCTCAGCTCAACCGCATGCTTGCG
TACCAGCTCCTTCTTGATGCGGTCCATGTAGTCTTTTTGATTATGCAACT
CGGTATCGTGTTGCTTGTTTATCTGCTCCTCGCGCAACTGGTGCACGCTC
TTCTGCTGGCGGTACTCCAGCTCCTGTGTCTTTTCGTGGTGCTTAAGAAG
CATGGCGTGTGCCTGCTGCAGTTGCTGCTCCTTCTTTTCGAGCTCGTCGC
GCAGCTGCTGATCCTCGTGCTCGTGCTGCATGATCATCCGTTTGCGCTTG
AACTTGCGCATCTCCAGCTCGATGTACTGCTTCTGGGCCTG

BS06650.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:30:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14217-PE 3120 Tao-1-RE 2146..3120 991..17 4850 99.8 Minus
CG14217-PD 3120 Tao-1-RD 2146..3120 991..17 4850 99.8 Minus
CG14217-PB 1410 Tao-1-RB 436..1410 991..17 4850 99.8 Minus
CG14217-PA 1479 Tao-1-RA 505..1479 991..17 4850 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:23:52
Subject Length Description Subject Range Query Range Score Percent Strand
Tao-RI 4230 CG14217-RI 2844..3818 991..17 4860 99.9 Minus
Tao-RG 2621 CG14217-RG 713..1687 991..17 4860 99.9 Minus
Tao-RF 5483 CG14217-RF 2649..3623 991..17 4860 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:23:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19571962..19572190 256..484 1130 99.6 Plus
X 23542271 X 19572252..19572427 482..657 880 100 Plus
X 23542271 X 19571581..19571707 17..143 635 100 Plus
X 23542271 X 19571775..19571895 141..261 605 100 Plus
X 23542271 X 19572497..19572617 656..776 605 100 Plus
X 23542271 X 19572678..19572800 773..895 600 99.2 Plus
X 23542271 X 19572865..19572961 895..991 485 100 Plus
Blast to na_te.dros performed on 2015-02-11 10:23:49 has no hits.

BS06650.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:47:56 Download gff for BS06650.3prime
Subject Subject Range Query Range Percent Splice Strand
Tao-1-PA 505..1479 17..991 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:29:19 Download gff for BS06650.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14217-PA 505..1479 17..991 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:06:42 Download gff for BS06650.3prime
Subject Subject Range Query Range Percent Splice Strand
Tao-RF 2657..3631 17..991 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:24:19 Download gff for BS06650.3prime
Subject Subject Range Query Range Percent Splice Strand
Tao-RF 2649..3623 17..991 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:24:19 Download gff for BS06650.3prime
Subject Subject Range Query Range Percent Splice Strand
X 19572866..19572961 896..991 100   Plus
X 19572678..19572800 773..895 99 <- Plus
X 19572497..19572613 656..772 100 <- Plus
X 19571581..19571704 17..140 100 <- Plus
X 19571775..19571893 141..259 100 <- Plus
X 19571966..19572187 260..481 100 <- Plus
X 19572252..19572425 482..655 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:06:42 Download gff for BS06650.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19465614..19465737 17..140 100 <- Plus
arm_X 19465808..19465926 141..259 100 <- Plus
arm_X 19465999..19466220 260..481 100 <- Plus
arm_X 19466285..19466458 482..655 100 <- Plus
arm_X 19466530..19466646 656..772 100 <- Plus
arm_X 19466711..19466833 773..895 99 <- Plus
arm_X 19466899..19466994 896..991 100   Plus

BS06650.5prime Sequence

832 bp (798 high quality bases) assembled on 2005-12-04

> BS06650.5prime
GAAGTTATCAGTCGACATGTTTTGGCCGAGATTTGCGCCCGTTGAGGTTA
TGGTTGAGCTGGAGTTCGGCAGCGGTTTTGAGGAGATGCACGAACAGATG
TCCGGCTACAAGCGGATGCGGCGCGAGCACCAGGCGCACCTGGTCAAACT
GGAGGAGAAGTGCAAGGTGGACATGGAGGCGCACAAGACGGCCCTGGACA
AGGAGTATGACACGCTGCTCCACAACTTTACGAGGGACCTCGATCGGCTT
GAGACGAAGCATCAGCAGGATGTGGAGAGGCGCGCTAAGCAAACGAGCGC
CGCCGAGAAGAAACTACACAAAGAGATTACGCTAAAGCAGGAGAACGATC
GCAAGGTGTACGACCTGAACCGCAAGAAGGAGTACAAGGCGAACAAGGAG
CGCTGGAAGCGGGAGCTCTCCATGGATGAGTCGACGCCCAAGCGGCAGCG
CGATCTTACCCTGCAATCGCAGAAGGACAACCTCAAGCAGCACGAGGCGC
AGGAGGAGCAGCGCATGCTCCAGGCCCAGAAGCAGTACATCGAGCTGGAG
ATGCGCAAGTTCAAGCGCAAACGGATGATCATGCAGCACGAGCACGAGGA
TCAGCAGCTGCGCGACGAGCTCGGAAAGAAGGAGCAGCAACTGCAGCAGG
CACACGCCATGCTTCTTAAGCACCACGAAAAGACACAGGAGCTGGAGTAC
CGCCAGCAGAAGAGCGTGCACCAGTTGCGCGAGGAGCAGATAAACAAGCA
ACACGATACCGAGTTGCATAATCAAAAAGACTACATGGACCGCATCAAGA
AGGAGCTGGTACGCAAGCATGCGGTTGAGCTG

BS06650.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:30:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14217-PA 1479 Tao-1-RA 1..816 17..832 4080 100 Plus
CG14217-PE 3120 Tao-1-RE 1705..2457 80..832 3765 100 Plus
CG14217-PD 3120 Tao-1-RD 1705..2457 80..832 3765 100 Plus
CG14217-PB 1410 Tao-1-RB 1..747 86..832 3735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
Tao-RG 2621 CG14217-RG 209..1024 17..832 4080 100 Plus
Tao-RA 2099 CG14217-RA 209..1024 17..832 4080 100 Plus
Tao-RI 4230 CG14217-RI 2403..3155 80..832 3765 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19572865..19573230 617..252 1830 100 Minus
X 23542271 X 19573291..19573464 253..80 870 100 Minus
X 23542271 X 19572678..19572800 739..617 615 100 Minus
X 23542271 X 19572521..19572617 832..736 485 100 Minus
X 23542271 X 19573603..19573666 80..17 320 100 Minus
Blast to na_te.dros performed on 2015-02-13 08:29:44 has no hits.

BS06650.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:47:57 Download gff for BS06650.5prime
Subject Subject Range Query Range Percent Splice Strand
Tao-1-PA 1..816 17..832 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:29:21 Download gff for BS06650.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14217-PA 1..816 17..832 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:16:08 Download gff for BS06650.5prime
Subject Subject Range Query Range Percent Splice Strand
Tao-RA 173..993 10..832 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:13:59 Download gff for BS06650.5prime
Subject Subject Range Query Range Percent Splice Strand
Tao-RA 204..1024 10..832 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:13:59 Download gff for BS06650.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19572521..19572613 740..832 100 <- Minus
X 19572678..19572800 617..739 100 <- Minus
X 19572866..19573228 254..616 100 <- Minus
X 19573291..19573464 80..253 100 <- Minus
X 19573604..19573671 10..79 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:16:08 Download gff for BS06650.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19466554..19466646 740..832 100 <- Minus
arm_X 19466711..19466833 617..739 100 <- Minus
arm_X 19466899..19467261 254..616 100 <- Minus
arm_X 19467324..19467497 80..253 100 <- Minus
arm_X 19467637..19467704 10..79 95   Minus

BS06650.complete Sequence

1511 bp (1511 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635578

> BS06650.complete
GAAGTTATCAGTCGACATGTTTTGGCCGAGATTTGCGCCCGTTGAGGTTA
TGGTTGAGCTGGAGTTCGGCAGCGGTTTTGAGGAGATGCACGAACAGATG
TCCGGCTACAAGCGGATGCGGCGCGAGCACCAGGCGCACCTGGTCAAACT
GGAGGAGAAGTGCAAGGTGGACATGGAGGCGCACAAGACGGCCCTGGACA
AGGAGTATGACACGCTGCTCCACAACTTTACGAGGGACCTCGATCGGCTT
GAGACGAAGCATCAGCAGGATGTGGAGAGGCGCGCTAAGCAAACGAGCGC
CGCCGAGAAGAAACTACACAAAGAGATTACGCTAAAGCAGGAGAACGATC
GCAAGGTGTACGACCTGAACCGCAAGAAGGAGTACAAGGCGAACAAGGAG
CGCTGGAAGCGGGAGCTCTCCATGGATGAGTCGACGCCCAAGCGGCAGCG
CGATCTTACCCTGCAATCGCAGAAGGACAACCTCAAGCAGCACGAGGCGC
AGGAGGAGCAGCGCATGCTCCAGGCCCAGAAGCAGTACATCGAGCTGGAG
ATGCGCAAGTTCAAGCGCAAACGGATGATCATGCAGCACGAGCACGAGGA
TCAGCAGCTGCGCGACGAGCTCGGAAAGAAGGAGCAGCAACTGCAGCAGG
CACACGCCATGCTTCTTAAGCACCACGAAAAGACACAGGAGCTGGAGTAC
CGCCAGCAGAAGAGCGTGCACCAGTTGCGCGAGGAGCAGATAAACAAGCA
ACACGATACCGAGTTGCATAATCAAAAAGACTACATGGACCGCATCAAGA
AGGAGCTGGTACGCAAGCATGCGGTTGAGCTGAGGCAACAGCCGAAGAGC
TTGAAGCAAAAGGAGCTCCAGATACGCAAGCAGTTCCGGGAAACATGCAA
GACGCAGACGAAGCAATACAAACGCTACAAGGCCCAAGTACTGCAGACGA
CACCAAAGGAGCAACAGAAGGAGGTCATTAAGCAGCTGAAGGAAGAGAAG
CATCGCAAGCTGACGCTGCTCGGTGAACAGTACGAGCAAAGCATTGCGGA
CATGTTCCAAAGTCAGAGCTACAAACTAGACGAAAGCCAAGTGATTGAGT
GCCAACGTACCCACGAGCAGCTGGAGTACGAGCTGGAGATGCTCACTGCC
TACCAGAACAAGAACAAGAAGCAGGCACAGGAGCAGCGCGATCGCGAGCG
TCGTGAGCTCGAGAATCGCGTCAGCGTGCGGCGTGGCCTGCTCGAGAATA
AGATGGACGCCGAGTTGCAGCAATTCAACCAGGAACGCGCCGAGCGCTTG
CGCATGAAACACGAGAAGCATACTAAAGAATTGGAAGCATTTGATAACGA
ATCAATTGCCCTAGGTTTCAGCACTTTATCTCTGATTGAGGTATCCCGAG
AAGCCTATGCAGATGAGGAGGGAAGTCTGTCTGGTTCAATGATTAGTTTA
GCCCATAGCAATAGTTCAACAAGTTTTCCGGCTGGTTCGCTATAGAAGCT
TTCTAGACCAT

BS06650.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:02:05
Subject Length Description Subject Range Query Range Score Percent Strand
Tao-RG 1479 CG14217-PG 1..1479 17..1495 7395 100 Plus
Tao-RA 1479 CG14217-PA 1..1479 17..1495 7395 100 Plus
Tao-RI 3117 CG14217-PI 1702..3117 80..1495 7080 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
Tao-RG 2621 CG14217-RG 209..1687 17..1495 7395 100 Plus
Tao-RA 2099 CG14217-RA 209..1687 17..1495 7395 100 Plus
Tao-RI 4230 CG14217-RI 2403..3818 80..1495 7080 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19572865..19573230 617..252 1830 100 Minus
X 23542271 X 19571962..19572190 1256..1028 1130 99.6 Minus
X 23542271 X 19572252..19572427 1030..855 880 100 Minus
X 23542271 X 19573291..19573464 253..80 870 100 Minus
X 23542271 X 19571581..19571707 1495..1369 635 100 Minus
X 23542271 X 19572678..19572800 739..617 615 100 Minus
X 23542271 X 19572497..19572617 856..736 605 100 Minus
X 23542271 X 19571775..19571895 1371..1251 605 100 Minus
X 23542271 X 19573603..19573666 80..17 320 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:02:04 has no hits.

BS06650.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:12:15 Download gff for BS06650.complete
Subject Subject Range Query Range Percent Splice Strand
Tao-1-RA 1..1479 17..1495 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:52:08 Download gff for BS06650.complete
Subject Subject Range Query Range Percent Splice Strand
Tao-1-RA 173..1656 10..1495 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:05:05 Download gff for BS06650.complete
Subject Subject Range Query Range Percent Splice Strand
Tao-RA 185..1656 24..1495 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:12:15 Download gff for BS06650.complete
Subject Subject Range Query Range Percent Splice Strand
Tao-1-RA 173..1656 10..1495 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:31:26 Download gff for BS06650.complete
Subject Subject Range Query Range Percent Splice Strand
Tao-RA 216..1687 24..1495 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:31:26 Download gff for BS06650.complete
Subject Subject Range Query Range Percent Splice Strand
X 19571966..19572187 1031..1252 100 <- Minus
X 19572252..19572425 857..1030 100 <- Minus
X 19572497..19572613 740..856 100 <- Minus
X 19572678..19572800 617..739 100 <- Minus
X 19571581..19571704 1372..1495 100 <- Minus
X 19571775..19571893 1253..1371 100 <- Minus
X 19572866..19573228 254..616 100 <- Minus
X 19573291..19573464 80..253 100 <- Minus
X 19573604..19573659 24..79 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:05:05 Download gff for BS06650.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19465614..19465737 1372..1495 100 <- Minus
arm_X 19465808..19465926 1253..1371 100 <- Minus
arm_X 19465999..19466220 1031..1252 100 <- Minus
arm_X 19466285..19466458 857..1030 100 <- Minus
arm_X 19466530..19466646 740..856 100 <- Minus
arm_X 19466711..19466833 617..739 100 <- Minus
arm_X 19466899..19467261 254..616 100 <- Minus
arm_X 19467324..19467497 80..253 100 <- Minus
arm_X 19467637..19467692 24..79 100   Minus

BS06650.pep Sequence

Translation from 16 to 1494

> BS06650.pep
MFWPRFAPVEVMVELEFGSGFEEMHEQMSGYKRMRREHQAHLVKLEEKCK
VDMEAHKTALDKEYDTLLHNFTRDLDRLETKHQQDVERRAKQTSAAEKKL
HKEITLKQENDRKVYDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQ
SQKDNLKQHEAQEEQRMLQAQKQYIELEMRKFKRKRMIMQHEHEDQQLRD
ELGKKEQQLQQAHAMLLKHHEKTQELEYRQQKSVHQLREEQINKQHDTEL
HNQKDYMDRIKKELVRKHAVELRQQPKSLKQKELQIRKQFRETCKTQTKQ
YKRYKAQVLQTTPKEQQKEVIKQLKEEKHRKLTLLGEQYEQSIADMFQSQ
SYKLDESQVIECQRTHEQLEYELEMLTAYQNKNKKQAQEQRDRERRELEN
RVSVRRGLLENKMDAELQQFNQERAERLRMKHEKHTKELEAFDNESIALG
FSTLSLIEVSREAYADEEGSLSGSMISLAHSNSSTSFPAGSL*

BS06650.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:27
Subject Length Description Subject Range Query Range Score Percent Strand
Tao-PG 492 CG14217-PG 1..492 1..492 2519 100 Plus
Tao-PA 492 CG14217-PA 1..492 1..492 2519 100 Plus
Tao-PI 1038 CG14217-PI 568..1038 22..492 2404 100 Plus
Tao-PF 1039 CG14217-PF 569..1039 22..492 2404 100 Plus
Tao-PD 1039 CG14217-PD 569..1039 22..492 2404 100 Plus