Clone Sequence Records
BS06675.3prime Sequence
859 bp (806 high quality bases) assembled on 2005-12-04
> BS06675.3prime
ATGGTCTAGAAAGCTTTCAGAATAAGCCAATTTGTTTCAGATTGTTCTTG
ATGATCACATCGGTGACGGCATCGAAGACGAACTTCACGTTGTTCGTATC
CGTGGCGCAGGTGAGATGCGTGTATATCTCCTTTTGGTCTTTTCGCTTGT
TCAGGTTTTCGAACTTCATGCGAATGTAGTTGGCCGCCTCCTCGAAGGTG
TTGGTTCCTGTGTACTCTGGGAAGCATATCGTCAGCGGAGATCTCTTGAT
CTTCTCCTCAAACAGATCCTTCTTGTTGAGGAACAGTATTATGGATGTTT
CCACAAACCACTTGGAGTTGCAGATGGAATCGAACAGCTTCAGGGACTCA
ATCATACGATTCATCTCTTCGTCCTCGGCCAATACTAGATCGTAACCTGA
TAGCGCGACGCAGAAGATTATGGCCGTAACGCCCTCGAAGCAATGAATCC
ACTTTTTGCGCTCCGATCGCTGGCCACCCACATCGAAAAGTTTGAAGTGC
AGCTGCTTGCAGGAGAAGTGTGTCTCGATGATGCCAGTGGTCTTCACCCG
CGTGCGTAGCACATCCTGCTGCGTGGGTATGTAGTTCGGTTGCGCGATCC
TATCCAGCGAATTTAGATAGTATCCCGCCGAGTCATTCAACTGATATTCG
CGCGATCGGGCGAAGCTCTGCTGTACGCCACCGTCTGCCCAGAGTTTCTT
CATCAGGAGCACGATCTCGGGCAGCAGGATGCCCTCGTCGGCGGCAGAGG
CGTGTGTGAAGAACTGGCGGGCAATGTCCGTTCGGCTCGGATCGGCAAAC
TCGATCTTCAGGCGTCCCATTGCGCGGATGATCACCATTAGACTCTGCAC
CGTGTTGCT
BS06675.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:31:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10060-PA | 1068 | G-ialpha65A-RA | 226..1068 | 859..17 | 4215 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphai-RA | 2067 | CG10060-RA | 632..1474 | 859..17 | 4215 | 100 | Minus |
| Galphao-RJ | 1785 | CG2204-RJ | 263..612 | 556..207 | 440 | 75.4 | Minus |
| Galphao-RI | 5457 | CG2204-RI | 920..1269 | 556..207 | 440 | 75.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:25:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6974002..6974369 | 492..859 | 1840 | 100 | Plus |
| 3L | 28110227 | 3L | 6973343..6973535 | 17..209 | 965 | 100 | Plus |
| 3L | 28110227 | 3L | 6973589..6973780 | 207..398 | 960 | 100 | Plus |
| 3L | 28110227 | 3L | 6973836..6973932 | 395..491 | 485 | 100 | Plus |
| 2R | 25286936 | 2R | 10461302..10461444 | 349..207 | 220 | 76.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:25:57 has no hits.
BS06675.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:48:42 Download gff for
BS06675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10060-PA | 226..1068 | 17..859 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:30:23 Download gff for
BS06675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10060-PA | 226..1068 | 17..859 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:04:49 Download gff for
BS06675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphai-RA | 632..1477 | 14..859 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:02:28 Download gff for
BS06675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphai-RA | 632..1477 | 14..859 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:02:28 Download gff for
BS06675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6973340..6973533 | 14..207 | 99 | <- | Plus |
| 3L | 6973590..6973778 | 208..396 | 100 | <- | Plus |
| 3L | 6973838..6973932 | 397..491 | 100 | <- | Plus |
| 3L | 6974002..6974369 | 492..859 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:04:49 Download gff for
BS06675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6966440..6966633 | 14..207 | 99 | <- | Plus |
| arm_3L | 6966690..6966878 | 208..396 | 100 | <- | Plus |
| arm_3L | 6966938..6967032 | 397..491 | 100 | <- | Plus |
| arm_3L | 6967102..6967469 | 492..859 | 100 | | Plus |
BS06675.5prime Sequence
877 bp (822 high quality bases) assembled on 2005-12-04
> BS06675.5prime
GAAGTTATCAGTCGACATGGGTTGTGCCGTGAGTACAGCACGCGATAAGG
AGGCCATCGAGCGGTCGAAGAACATCGATCGCGCCCTGCGGGCGGAGGGC
GAGCGGGCCGCCTCGGAGGTGAAACTGCTGCTGCTGGGAGCCGGAGAGTC
GGGCAAGTCAACGATTGTGAAACAGATGAAGATCATCCATGACACGGGCT
ACTCGCAGGAGGAATGCGAGGAGTATCGTCGCGTCGTCTTCAGCAACACG
GTGCAGAGTCTAATGGTGATCATCCGCGCAATGGGACGCCTGAAGATCGA
GTTTGCCGATCCGAGCCGAACGGACATTGCCCGCCAGTTCTTCACACACG
CCTCTGCCGCCGACGAGGGCATCCTGCTGCCCGAGATCGTGCTCCTGATG
AAGAAACTCTGGGCAGACGGTGGCGTACAGCAGAGCTTCGCCCGATCGCG
CGAATATCAGTTGAATGACTCGGCGGGATACTATCTAAATTCGCTGGATA
GGATCGCGCAACCGAACTACATACCCACGCAGCAGGATGTGCTACGCACG
CGGGTGAAGACCACTGGCATCATCGAGACACACTTCTCCTGCAAGCAGCT
GCACTTCAAACTTTTCGATGTGGGTGGCCAGCGATCGGAGCGCAAAAAGT
GGATTCATTGCTTCGAGGGCGTTACGGCCATAATCTTCTGCGTCGCGCTA
TCAGGTTACGATCTAGTATTGGCCGAGGACGAAGAGATGAATCGTATGAT
TGAGTCCCTGAAGCTGTTCGATTCCATCTGCAACTCCNAGTGGTTTGTGG
AAACATCCATAATACTGTTCCTCANCAAGAAGGATCTGTTTGAGGAGAAG
ATCAAGAGATCTCCGCTGACGATATGC
BS06675.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:31:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10060-PA | 1068 | G-ialpha65A-RA | 1..861 | 17..877 | 4267 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:46:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphai-RA | 2067 | CG10060-RA | 407..1267 | 17..877 | 4283 | 99.8 | Plus |
| Galphao-RJ | 1785 | CG2204-RJ | 263..570 | 545..852 | 363 | 74.4 | Plus |
| Galphao-RI | 5457 | CG2204-RI | 920..1227 | 545..852 | 363 | 74.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:46:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6974002..6974474 | 609..137 | 2365 | 100 | Minus |
| 3L | 28110227 | 3L | 6973606..6973780 | 877..703 | 853 | 98.9 | Minus |
| 3L | 28110227 | 3L | 6979517..6979638 | 138..17 | 610 | 100 | Minus |
| 3L | 28110227 | 3L | 6973836..6973932 | 706..610 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:46:13 has no hits.
BS06675.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:48:43 Download gff for
BS06675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10060-PA | 1..861 | 17..877 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:30:24 Download gff for
BS06675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10060-PA | 1..861 | 17..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:43:39 Download gff for
BS06675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphai-RA | 401..1267 | 12..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:55:30 Download gff for
BS06675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphai-RA | 401..1267 | 12..877 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:55:30 Download gff for
BS06675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6973606..6973778 | 705..877 | 98 | <- | Minus |
| 3L | 6973838..6973932 | 610..704 | 100 | <- | Minus |
| 3L | 6974002..6974473 | 138..609 | 100 | <- | Minus |
| 3L | 6979518..6979644 | 12..137 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:43:39 Download gff for
BS06675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6966706..6966878 | 705..877 | 98 | <- | Minus |
| arm_3L | 6966938..6967032 | 610..704 | 100 | <- | Minus |
| arm_3L | 6967102..6967573 | 138..609 | 100 | <- | Minus |
| arm_3L | 6972618..6972744 | 12..137 | 98 | | Minus |
BS06675.complete Sequence
1100 bp (1100 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635585
> BS06675.complete
GAAGTTATCAGTCGACATGGGTTGTGCCGTGAGTACAGCACGCGATAAGG
AGGCCATCGAGCGGTCGAAGAACATCGATCGCGCCCTGCGGGCGGAGGGC
GAGCGGGCCGCCTCGGAGGTGAAACTGCTGCTGCTGGGAGCCGGAGAGTC
GGGCAAGTCAACGATTGTGAAACAGATGAAGATCATCCATGACACGGGCT
ACTCGCAGGAGGAATGCGAGGAGTATCGTCGCGTCGTCTTCAGCAACACG
GTGCAGAGTCTAATGGTGATCATCCGCGCAATGGGACGCCTGAAGATCGA
GTTTGCCGATCCGAGCCGAACGGACATTGCCCGCCAGTTCTTCACACACG
CCTCTGCCGCCGACGAGGGCATCCTGCTGCCCGAGATCGTGCTCCTGATG
AAGAAACTCTGGGCAGACGGTGGCGTACAGCAGAGCTTCGCCCGATCGCG
CGAATATCAGTTGAATGACTCGGCGGGATACTATCTAAATTCGCTGGATA
GGATCGCGCAACCGAACTACATACCCACGCAGCAGGATGTGCTACGCACG
CGGGTGAAGACCACTGGCATCATCGAGACACACTTCTCCTGCAAGCAGCT
GCACTTCAAACTTTTCGATGTGGGTGGCCAGCGATCGGAGCGCAAAAAGT
GGATTCATTGCTTCGAGGGCGTTACGGCCATAATCTTCTGCGTCGCGCTA
TCAGGTTACGATCTAGTATTGGCCGAGGACGAAGAGATGAATCGTATGAT
TGAGTCCCTGAAGCTGTTCGATTCCATCTGCAACTCCAAGTGGTTTGTGG
AAACATCCATAATACTGTTCCTCAACAAGAAGGATCTGTTTGAGGAGAAG
ATCAAGAGATCTCCGCTGACGATATGCTTCCCAGAGTACACAGGAACCAA
CACCTTCGAGGAGGCGGCCAACTACATTCGCATGAAGTTCGAAAACCTGA
ACAAGCGAAAAGACCAAAAGGAGATATACACGCATCTCACCTGCGCCACG
GATACGAACAACGTGAAGTTCGTCTTCGATGCCGTCACCGATGTGATCAT
CAAGAACAATCTGAAACAAATTGGCTTATTCTGAAAGCTTTCTAGACCAT
BS06675.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:33:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphai-RA | 1068 | CG10060-PA | 1..1068 | 17..1084 | 5340 | 100 | Plus |
| Galphao-RI | 1065 | CG2204-PI | 529..878 | 545..894 | 415 | 74.6 | Plus |
| Galphao-RH | 1065 | CG2204-PH | 529..878 | 545..894 | 415 | 74.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:33:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphai-RA | 2067 | CG10060-RA | 407..1474 | 17..1084 | 5340 | 100 | Plus |
| Galphao-RJ | 1785 | CG2204-RJ | 263..612 | 545..894 | 415 | 74.6 | Plus |
| Galphao-RI | 5457 | CG2204-RI | 920..1269 | 545..894 | 415 | 74.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:33:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6974002..6974474 | 609..137 | 2365 | 100 | Minus |
| 3L | 28110227 | 3L | 6973343..6973535 | 1084..892 | 965 | 100 | Minus |
| 3L | 28110227 | 3L | 6973589..6973780 | 894..703 | 960 | 100 | Minus |
| 3L | 28110227 | 3L | 6979517..6979638 | 138..17 | 610 | 100 | Minus |
| 3L | 28110227 | 3L | 6973836..6973932 | 706..610 | 485 | 100 | Minus |
| 2R | 25286936 | 2R | 10461302..10461444 | 752..894 | 220 | 76.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:33:18 has no hits.
BS06675.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:12:12 Download gff for
BS06675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| G-ialpha65A-RA | 1..1068 | 17..1084 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:52:04 Download gff for
BS06675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| G-ialpha65A-RA | 410..1486 | 12..1087 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:17 Download gff for
BS06675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphai-RA | 407..1473 | 17..1083 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:12:13 Download gff for
BS06675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| G-ialpha65A-RA | 410..1486 | 12..1087 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:21:51 Download gff for
BS06675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphai-RA | 407..1473 | 17..1083 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:21:51 Download gff for
BS06675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6973344..6973533 | 894..1083 | 100 | <- | Minus |
| 3L | 6973590..6973778 | 705..893 | 100 | <- | Minus |
| 3L | 6973838..6973932 | 610..704 | 100 | <- | Minus |
| 3L | 6974002..6974473 | 138..609 | 100 | <- | Minus |
| 3L | 6979518..6979638 | 17..137 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:17 Download gff for
BS06675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6967102..6967573 | 138..609 | 100 | <- | Minus |
| arm_3L | 6966444..6966633 | 894..1083 | 100 | <- | Minus |
| arm_3L | 6966690..6966878 | 705..893 | 100 | <- | Minus |
| arm_3L | 6966938..6967032 | 610..704 | 100 | <- | Minus |
| arm_3L | 6972618..6972738 | 17..137 | 100 | | Minus |
BS06675.pep Sequence
Translation from 16 to 1083
> BS06675.pep
MGCAVSTARDKEAIERSKNIDRALRAEGERAASEVKLLLLGAGESGKSTI
VKQMKIIHDTGYSQEECEEYRRVVFSNTVQSLMVIIRAMGRLKIEFADPS
RTDIARQFFTHASAADEGILLPEIVLLMKKLWADGGVQQSFARSREYQLN
DSAGYYLNSLDRIAQPNYIPTQQDVLRTRVKTTGIIETHFSCKQLHFKLF
DVGGQRSERKKWIHCFEGVTAIIFCVALSGYDLVLAEDEEMNRMIESLKL
FDSICNSKWFVETSIILFLNKKDLFEEKIKRSPLTICFPEYTGTNTFEEA
ANYIRMKFENLNKRKDQKEIYTHLTCATDTNNVKFVFDAVTDVIIKNNLK
QIGLF*
BS06675.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphai-PA | 355 | CG10060-PA | 1..355 | 1..355 | 1821 | 100 | Plus |
| Galphao-PH | 354 | CG2204-PH | 1..354 | 1..355 | 1165 | 64 | Plus |
| Galphao-PG | 354 | CG2204-PG | 1..354 | 1..355 | 1165 | 64 | Plus |
| Galphao-PF | 354 | CG2204-PF | 1..354 | 1..355 | 1165 | 64 | Plus |
| Galphao-PE | 354 | CG2204-PE | 1..354 | 1..355 | 1165 | 64 | Plus |
