Clone BS06695 Report

Search the DGRC for BS06695

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:66
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptAats-lys-RA
Protein status:BS06695.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06695.3prime Sequence

915 bp (754 high quality bases) assembled on 2005-12-04

> BS06695.3prime
ATGGTCTAGAAAGCTTCTACTGCTGTGCGGTGGGAGCAGTTTCCGCTGCC
GTGCGGTTGGCATCCTCCGGTTTCATGGCGGGGAACAGCAGAACCTCCTT
GATGTTGTTGGAGTCCGTGAGGAACATGGCCAGGCGATCGATGCCCATGC
CAAAACCACCGGTGGGCGGCAGTCCGTACTCCAGGGACGTGCAGAAGTTC
TCGTCGACCAGCTGGGCCTCATCATCGCCGGCCGCCTTGTCGCTGGCCTG
CTGCTCGAAACGCTCGCGCTGCACAACCGGATCGTTCAACTCGGTATACG
CGTTGCAAATCTCCTTCTTGGCCACAAACAGTTCGAAGCGCTCCGTCAGG
CCGGGAATACTGCGATGGTACTTGGCCAGCGGCGACATGATCTGCGGATG
CTCACAGATGAACGTTGGATTCACGCAAAACTCCTCGATGAATTCGCCGA
CGAGCTTGTCCAGCAGGCGGGCAGTGGTGCGCGGAGCTGGGCACTCGACC
TGGTGCTTAGCGCACAGCTGAGACAGGAACTGATTCGTCTCTGGCGAATT
GAAGGTGTCGGCCGCGGGGAACTTCACCTGCAGCTTCTCTTCCAGCGTTT
TGATCATGGATACGCGCTTAAAGGGCGGCGTAAAGTCAAGTTCTTGCTCA
GGTCCCTCTGGACCCTCCGGATGATAGATGACCTTGTAGGAGCCACGGAT
CGCTTTCACCATTCCCGAGACCAACTGCTCGGTGATATCCATAATGTCAG
CGTAGTCGGCATACGCCATGTAGAACTCGCACGTGGTGAATTCAGGATTG
TGGGTGAGGTCGATGCCCTCGTTGCGGAACTGCCGTCCGATCTCGTACAC
ACGATCGAGTCCACCCACCACCAGCATCTTGTGATACAGCTCGGGAGCAA
TGCGCATGAACAGAT

BS06695.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG12141-PA 1725 Aats-lys-RA 827..1725 915..17 4470 99.8 Minus
CG12141-PB 1824 Aats-lys-RB 926..1824 915..17 4470 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 14:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-lys-RC 2160 CG12141-RC 1152..2051 915..16 4485 99.9 Minus
Aats-lys-RB 2223 CG12141-RB 1215..2114 915..16 4485 99.9 Minus
Aats-lys-RA 1969 CG12141-RA 961..1860 915..16 4485 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 14:45:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9606612..9607437 90..915 4085 99.6 Plus
X 23542271 X 9606472..9606555 16..99 420 100 Plus
Blast to na_te.dros performed 2015-01-30 14:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy12 10218 gypsy12 GYPSY12 10218bp 7727..7764 317..280 118 78.9 Minus

BS06695.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:49:14 Download gff for BS06695.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12141-PA 827..1725 17..915 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:31:07 Download gff for BS06695.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12141-PB 926..1824 17..915 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:06:07 Download gff for BS06695.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-lys-RA 961..1860 16..915 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:36:53 Download gff for BS06695.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-lys-RA 961..1860 16..915 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:36:53 Download gff for BS06695.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9606472..9606553 16..97 100 <- Plus
X 9606620..9607437 98..915 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:06:07 Download gff for BS06695.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9500505..9500586 16..97 100 <- Plus
arm_X 9500653..9501470 98..915 99   Plus

BS06695.5prime Sequence

885 bp (832 high quality bases) assembled on 2005-12-04

> BS06695.5prime
GAAGTTATCAGTCGACATGGCCGCTGCAAGTGGAGAACTGTCCAAGAATG
AGCTAAAGCGTCGCCTGAAGGCCGAGCAAAAGGCCAAGGAGAAGGCTGAG
AAGGCGGCCGCTGCGCCGGCGGAAAATACTGCTGGCAAGAAGAAGAGCAG
TGCCGCCGAGGAGGAGGAGATCTCGCCGAATGAATACTTTAAGCTGCGCT
CCGCCGCCGTTCAGGAGCTGAAACGTTCACCCGCAACGGATCCCTATCCA
CACAAGTTCCATGTGAGTAGCTCGCTGGAAGACTTCATTGCCAAGTACGA
GAACAGCCTCAAGGAGGGCGAGACCCTGGAGAATGTCAAACTGAGCGTGG
CTGGGCGCGTGCATGCCATACGCGAGTCGGGCGCCAAGCTCATTTTCTAC
GATCTGCGCGGCGAGGGCGTCAAGGTGCAGGTGATGGCCAGCGCTAAGTC
CTACAAGTCGGAGGCGGATTTCGAAATCGATACGTCCAAATTGCGACGTG
GTGATATCATCGGCGTTGTCGGACATCCCGGCAAAACCAAGAAGGGTGAA
CTGTCCGTTATGCCCAGCGAGATCAAGCTGCTATCGCCCTGTCTACACAT
GCTGCCCCATCTGCATTTCGGGTTGAAGGACAAGGAGACGCGCTACCGCC
AGCGCTATCTTGATCTCATTCTCAACAACAATGTGCGAGAGAAATTCCAG
ATCCGTGCCAAGATCATCTCGTACGTGCGTCAGTTCCTGGATCGTCTGGG
TTTCCTGGAGATCGAGACGCCCATGATGAACATGATCGCCGGTGGAGCCA
CTGCCAAGCCCTTCGTGACGCATCACAATGACCTCAAGATGGATCTGTTC
ATGCGCATTGCTCCGGAGCTGTATCACAAGATGCT

BS06695.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG12141-PA 1725 Aats-lys-RA 1..869 17..885 4345 100 Plus
CG12141-PB 1824 Aats-lys-RB 132..968 49..885 4185 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:52:03
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-lys-RA 1969 CG12141-RA 134..1003 16..885 4350 100 Plus
Aats-lys-RC 2160 CG12141-RC 358..1194 49..885 4185 100 Plus
Aats-lys-RB 2223 CG12141-RB 421..1257 49..885 4185 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:51:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9607629..9608292 712..49 3320 100 Minus
X 23542271 X 9607395..9607569 885..711 875 100 Minus
Blast to na_te.dros performed on 2015-02-12 12:51:59 has no hits.

BS06695.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:49:15 Download gff for BS06695.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12141-PA 1..869 17..885 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:31:08 Download gff for BS06695.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12141-PA 1..869 17..885 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:04:52 Download gff for BS06695.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-lys-RA 128..1003 9..885 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:27:21 Download gff for BS06695.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-lys-RA 128..1003 9..885 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:27:21 Download gff for BS06695.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9607395..9607567 713..885 100 <- Minus
X 9607629..9608292 49..712 100 <- Minus
X 9608719..9608757 9..48 92   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:04:52 Download gff for BS06695.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9501428..9501600 713..885 100 <- Minus
arm_X 9501662..9502325 49..712 100 <- Minus
arm_X 9502752..9502790 9..48 92   Minus

BS06695.complete Sequence

1757 bp assembled on 2007-10-17

GenBank Submission: FJ635591

> BS06695.complete
GAAGTTATCAGTCGACATGGCCGCTGCAAGTGGAGAACTGTCCAAGAATG
AGCTAAAGCGTCGCCTGAAGGCCGAGCAAAAGGCCAAGGAGAAGGCTGAG
AAGGCGGCCGCTGCGCCGGCGGAAAATACTGCTGGCAAGAAGAAGAGCAG
TGCCGCCGAGGAGGAGGAGATCTCGCCGAATGAATACTTTAAGCTGCGCT
CCGCCGCCGTTCAGGAGCTGAAACGTTCACCCGCAACGGATCCCTATCCA
CACAAGTTCCATGTGAGTAGCTCGCTGGAAGACTTCATTGCCAAGTACGA
GAACAGCCTCAAGGAGGGCGAGACCCTGGAGAATGTCAAACTGAGCGTGG
CTGGGCGCGTGCATGCCATACGCGAGTCGGGCGCCAAGCTCATTTTCTAC
GATCTGCGCGGCGAGGGCGTCAAGGTGCAGGTGATGGCCAGCGCTAAGTC
CTACAAGTCGGAGGCGGATTTCGAAATCGATACGTCCAAATTGCGACGTG
GTGATATCATCGGCGTTGTCGGACATCCCGGCAAAACCAAGAAGGGTGAA
CTGTCCGTTATGCCCAGCGAGATCAAGCTGCTATCGCCCTGTCTACACAT
GCTGCCCCATCTGCATTTCGGGTTGAAGGACAAGGAGACGCGCTACCGCC
AGCGCTATCTTGATCTCATTCTCAACAACAATGTGCGAGAGAAATTCCAG
ATCCGTGCCAAGATCATCTCGTACGTGCGTCAGTTCCTGGATCGTCTGGG
TTTCCTGGAGATCGAGACGCCCATGATGAACATGATCGCCGGTGGAGCCA
CTGCCAAGCCCTTCGTGACGCATCACAATGACCTCAAGATGGATCTGTTC
ATGCGCATTGCTCCGGAGCTGTATCACAAGATGCTGGTGGTGGGTGGACT
CGATCGTGTGTACGAGATCGGACGGCAGTTCCGCAACGAGGGCATCGACC
TCACCCACAATCCTGAATTCACCACGTGCGAGTTCTACATGGCGTATGCC
GACTACGCTGACATTATGGATATCACCGAGCAGTTGGTCTCGGGAATGGT
GAAAGCGATCCGTGGCTCCTACAAGGTCATCTATCATCCGGAGGGTCCAG
AGGGACCTGAGCAAGAACTTGACTTTACGCCGCCCTTTAAGCGCGTATCC
ATGATCAAAACGCTGGAAGAGAAGCTGCAGGTGAAGTTCCCCGCGGCCGA
CACCTTCAATTCGCCAGAGACGAATCAGTTCCTGTCTCAGCTGTGCGCTA
AGCACCAGGTCGAGTGCCCAGCTCCGCGCACCACTGCCCGCCTGCTGGAC
AAGCTCGTCGGCGAATTCATCGAGGAGTTTTGCGTGAATCCAACGTTCAT
CTGTGAGCATCCGCAGATCATGTCGCCGCTGGCCAAGTACCATCGCAGTA
TTCCCGGCCTGACGGAGCGCTTCGAACTGTTTGTGGCCAAGAAGGAGATT
TGCAACGCGTATACCGAGTTGAACGATCCGGTTGTGCAGCGCGAGCGTTT
CGAGCAGCAGGCCAGCGACAAGGCGGCCGGCGATGATGAGGCCCAGCTGG
TCGACGAGAACTTCTGCACGTCCCTGGAGTACGGACTGCCGCCCACCGGT
GGTTTTGGCATGGGCATCGATCGCCTGGCCATGTTCCTCACGGACTCCAA
CAACATCAAGGAGGTTCTGCTGTTCCCCGCCATGAAACCGGAGGATGCCA
ACCGCACGGCAGCGGAAACTGCTCCCACCGCACAGCAGTAGAAGCTTTCT
AGACCAT

BS06695.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:17:45
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-lys-RA 1725 CG12141-PA 1..1725 17..1741 8625 100 Plus
Aats-lys-RC 1824 CG12141-PC 132..1824 49..1741 8465 100 Plus
Aats-lys-RB 1824 CG12141-PB 132..1824 49..1741 8465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:17:46
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-lys-RA 1969 CG12141-RA 134..1860 16..1742 8635 100 Plus
Aats-lys-RC 2160 CG12141-RC 358..2051 49..1742 8470 100 Plus
Aats-lys-RB 2223 CG12141-RB 421..2114 49..1742 8470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:17:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9606612..9607569 1668..711 4760 99.8 Minus
X 23542271 X 9607629..9608292 712..49 3320 100 Minus
X 23542271 X 9606472..9606555 1742..1659 420 100 Minus
Blast to na_te.dros performed 2014-11-26 22:17:45
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy12 10218 gypsy12 GYPSY12 10218bp 7727..7764 1441..1478 118 78.9 Plus

BS06695.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:06:10 Download gff for BS06695.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-lys-RA 1..1725 17..1741 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:35:21 Download gff for BS06695.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-lys-RA 128..1860 9..1742 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:53:21 Download gff for BS06695.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-lys-RA 135..1859 17..1741 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:44:50 Download gff for BS06695.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-lys-RA 135..1859 17..1741 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:56:52 Download gff for BS06695.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-lys-RA 135..1859 17..1741 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:56:52 Download gff for BS06695.complete
Subject Subject Range Query Range Percent Splice Strand
X 9606473..9606553 1661..1741 100 <- Minus
X 9606620..9607567 713..1660 100 <- Minus
X 9607629..9608292 49..712 100 <- Minus
X 9608719..9608750 17..48 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:53:21 Download gff for BS06695.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9500506..9500586 1661..1741 100 <- Minus
arm_X 9500653..9501600 713..1660 100 <- Minus
arm_X 9501662..9502325 49..712 100 <- Minus
arm_X 9502752..9502783 17..48 100   Minus

BS06695.pep Sequence

Translation from 16 to 1740

> BS06695.pep
MAAASGELSKNELKRRLKAEQKAKEKAEKAAAAPAENTAGKKKSSAAEEE
EISPNEYFKLRSAAVQELKRSPATDPYPHKFHVSSSLEDFIAKYENSLKE
GETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEA
DFEIDTSKLRRGDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLH
FGLKDKETRYRQRYLDLILNNNVREKFQIRAKIISYVRQFLDRLGFLEIE
TPMMNMIAGGATAKPFVTHHNDLKMDLFMRIAPELYHKMLVVGGLDRVYE
IGRQFRNEGIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIRG
SYKVIYHPEGPEGPEQELDFTPPFKRVSMIKTLEEKLQVKFPAADTFNSP
ETNQFLSQLCAKHQVECPAPRTTARLLDKLVGEFIEEFCVNPTFICEHPQ
IMSPLAKYHRSIPGLTERFELFVAKKEICNAYTELNDPVVQRERFEQQAS
DKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEV
LLFPAMKPEDANRTAAETAPTAQQ*

BS06695.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:37:28
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-lys-PA 574 CG12141-PA 1..574 1..574 2963 100 Plus
Aats-lys-PC 607 CG12141-PC 42..607 9..574 2915 99.6 Plus
Aats-lys-PB 607 CG12141-PB 42..607 9..574 2915 99.6 Plus
CG31739-PC 1082 CG31739-PC 337..654 6..339 196 23.5 Plus
CG31739-PB 1082 CG31739-PB 337..654 6..339 196 23.5 Plus