Clone Sequence Records
BS06707.3prime Sequence
852 bp (826 high quality bases) assembled on 2005-12-04
> BS06707.3prime
ATGGTCTAGAAAGCTTTTAAACGGCTTTTTGGGCATCGGGACTCGTCGTT
GAACTCTGAGGCAATAGGTTCTGCTCGGAGGACGCAACTAACTTCTCCTC
CAGTGGGAGGTGAACGCCGAAATCGTGCTTCATGTAGGACATGAGCACAT
TGTAAACAGCCGTGCACACATTGACGAACGTCACCCGGTATTTGGTGTCT
AAATAGCGAAAGTTCAGGTACTGCGCCGCCGGCCAGGTCATCCAATCCAG
CATGTAAACATACGGGAACTTGGAGATCAGCTCCTGATTGGTGGCGTCCA
GGGTCTGGCGCTCCAGATAGCAAAGCGAATAGAAGAATATGACGATGCAG
GCGGGCGACATGACCAGCTGGTCAATCAGGATCTTCTTGAAGATGTTCTT
TAGCGTACGAGCCGGCATTACCCTGTCCATCCAGTTGTACACGTAGTGGT
GAAGAGGTCCCTGCAGCGCGCCAGCCACAAACATCCGGTACATGCGATCC
GTATCGAAGCGGTCCTGGTGCCGCAATCCACGCCTGTACTCGTACTCCTG
GGCTATCACATCGCCCACGACCATCAGCAGTCCGGAGCCCACCACGTTCG
TAACGAGCAGATACTTGCCGAACATGTTGCTCCACGCGATCTTAGTCCAT
CGCAGCAGTATGAAACTAAGCGCTCCACCCTCCGTTTCCCCCTTGCCATG
GGTAAAACGAAGTCCGTACTTTTGGTATCCCACACCATGGCTTCTCATCC
GGCACAGAGCCGCAAAATCTCTGCGGGAATTGTGGGAGCCATGGATTCGG
AGACTGTAGCACTGGCGCAGGGCACGAGTGGCAAACATGTCGACTGATAA
CT
BS06707.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:31:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-PA | 822 | CG32262-RA | 1..822 | 838..17 | 4035 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:07:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-RA | 1051 | CG32262-RA | 100..921 | 838..17 | 4065 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:07:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3809276..3810097 | 17..838 | 4065 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-10 19:07:04 has no hits.
BS06707.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:49:30 Download gff for
BS06707.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-PA | 1..822 | 17..838 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:31:28 Download gff for
BS06707.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-PA | 1..822 | 17..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:13:16 Download gff for
BS06707.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 100..921 | 17..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:27:13 Download gff for
BS06707.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 100..921 | 17..838 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:27:13 Download gff for
BS06707.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3809276..3810086 | 17..827 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:13:16 Download gff for
BS06707.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3809276..3810086 | 17..827 | 99 | -> | Plus |
BS06707.5prime Sequence
851 bp (754 high quality bases) assembled on 2005-12-04
> BS06707.5prime
GAAGTTATCAGTCGACATGTTTGGCACTCGTTGCCTGCGCCAGTGCTACA
GTCTCCGAATCCATGGCTCCCACAATTCCCGCAGAGATTTTGCGGCTCTG
TGCCGGATGAGAAGCCATGGTGTGGGATACCAAAAGTACGGACTTCGTTT
TACCCATGGCAAGGGGGAAACGGAGGGTGGAGCGCTTAGTTTCATACTGC
TGCGATGGACTAAGATCGCGTGGAGCAACATGTTCGGCAAGTATCTGCTC
GTTACGAACGTGGTGGGCTCCGGACTGCTGATGGTCGTGGGCGATGTGAT
AGCCCAGGAGTACGAGTACAGGCGTGGATTGCGGCACCAGGACCGCTTCG
ATACGGATCGCATGTACCGGATGTTTGTGGCTGGCGCGCTGCAGGGACCT
CTTCACCACTACGTGTACAACTGGATGGACAGGGTAATGCCGGCTCGTAC
GCTAAAGAACATCTTCAAGAAGATCCTGATTGACCAGCTGGTCATGTCGC
CCGCCTGCATCGTCATATTCTTCTATTCGCTTTGCTATCTGGAGCGCCAG
ACCCTGGACGCCACCAATCAGGAGCTGATCTCCAAGTTCCCGTATGTTTA
CATGCTGGATTGGATGACCTGGCCGGCGGCGCAGTACCTGAACTTTCGCT
ATTTAGACACCAAATACCGGGTGACGTTCGTCAATGTGTGCACGGCTGTT
TACAATGTGCTCATGTCCTACATGAAGCACGATTTCGGCGTTCACCTCCC
ACTGGAGGAGAAGTTAGTTGCGTCCTCCGAGCAGAACCTATTGCCTCAGA
GTTCAACGACGAGTCCCGATGCCCAAAAGCCGTTTAAAAGCTTTCTAGAC
C
BS06707.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:31:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-PA | 822 | CG32262-RA | 1..812 | 17..828 | 4060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:38:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-RA | 1051 | CG32262-RA | 100..921 | 17..837 | 4085 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:38:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3809286..3810097 | 828..17 | 4060 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 18:38:15 has no hits.
BS06707.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:49:31 Download gff for
BS06707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-PA | 1..822 | 17..837 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:31:30 Download gff for
BS06707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-PA | 1..822 | 17..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:31:26 Download gff for
BS06707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 100..921 | 17..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:16:35 Download gff for
BS06707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 100..921 | 17..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:16:35 Download gff for
BS06707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3809276..3810097 | 17..837 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:31:26 Download gff for
BS06707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3809276..3810097 | 17..837 | 99 | | Minus |
BS06707.complete Sequence
854 bp (854 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635595
> BS06707.complete
GAAGTTATCAGTCGACATGTTTGGCACTCGTTGCCTGCGCCAGTGCTACA
GTCTCCGAATCCATGGCTCCCACAATTCCCGCAGAGATTTTGCGGCTCTG
TGCCGGATGAGAAGCCATGGTGTGGGATACCAAAAGTACGGACTTCGTTT
TACCCATGGCAAGGGGGAAACGGAGGGTGGAGCGCTTAGTTTCATACTGC
TGCGATGGACTAAGATCGCGTGGAGCAACATGTTCGGCAAGTATCTGCTC
GTTACGAACGTGGTGGGCTCCGGACTGCTGATGGTCGTGGGCGATGTGAT
AGCCCAGGAGTACGAGTACAGGCGTGGATTGCGGCACCAGGACCGCTTCG
ATACGGATCGCATGTACCGGATGTTTGTGGCTGGCGCGCTGCAGGGACCT
CTTCACCACTACGTGTACAACTGGATGGACAGGGTAATGCCGGCTCGTAC
GCTAAAGAACATCTTCAAGAAGATCCTGATTGACCAGCTGGTCATGTCGC
CCGCCTGCATCGTCATATTCTTCTATTCGCTTTGCTATCTGGAGCGCCAG
ACCCTGGACGCCACCAATCAGGAGCTGATCTCCAAGTTCCCGTATGTTTA
CATGCTGGATTGGATGACCTGGCCGGCGGCGCAGTACCTGAACTTTCGCT
ATTTAGACACCAAATACCGGGTGACGTTCGTCAATGTGTGCACGGCTGTT
TACAATGTGCTCATGTCCTACATGAAGCACGATTTCGGCGTTCACCTCCC
ACTGGAGGAGAAGTTAGTTGCGTCCTCCGAGCAGAACCTATTGCCTCAGA
GTTCAACGACGAGTCCCGATGCCCAAAAAGCCGTTTAAAAGCTTTCTAGA
CCAT
BS06707.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:09:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-RA | 822 | CG32262-PA | 1..822 | 17..838 | 4110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:09:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-RA | 1051 | CG32262-RA | 100..921 | 17..838 | 4110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:09:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3809276..3810097 | 838..17 | 4110 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:09:47 has no hits.
BS06707.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:11:56 Download gff for
BS06707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 1..822 | 17..838 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:51:46 Download gff for
BS06707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 85..906 | 17..838 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:57 Download gff for
BS06707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 106..919 | 23..836 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:11:57 Download gff for
BS06707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 85..906 | 17..838 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:12:15 Download gff for
BS06707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32262-RA | 106..919 | 23..836 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:12:15 Download gff for
BS06707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3809278..3810091 | 23..836 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:57 Download gff for
BS06707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3809278..3810091 | 23..836 | 100 | | Minus |
BS06707.pep Sequence
Translation from 16 to 837
> BS06707.pep
MFGTRCLRQCYSLRIHGSHNSRRDFAALCRMRSHGVGYQKYGLRFTHGKG
ETEGGALSFILLRWTKIAWSNMFGKYLLVTNVVGSGLLMVVGDVIAQEYE
YRRGLRHQDRFDTDRMYRMFVAGALQGPLHHYVYNWMDRVMPARTLKNIF
KKILIDQLVMSPACIVIFFYSLCYLERQTLDATNQELISKFPYVYMLDWM
TWPAAQYLNFRYLDTKYRVTFVNVCTAVYNVLMSYMKHDFGVHLPLEEKL
VASSEQNLLPQSSTTSPDAQKAV*
BS06707.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:41:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32262-PA | 273 | CG32262-PA | 1..273 | 1..273 | 1458 | 100 | Plus |
| CG32263-PA | 206 | CG32263-PA | 33..206 | 69..245 | 400 | 46.3 | Plus |
| CG1662-PB | 245 | CG1662-PB | 62..234 | 61..238 | 299 | 38.2 | Plus |
| CG1662-PA | 245 | CG1662-PA | 62..234 | 61..238 | 299 | 38.2 | Plus |
| CG5906-PA | 196 | CG5906-PA | 16..186 | 63..238 | 271 | 35.8 | Plus |
