Clone BS06722 Report

Search the DGRC for BS06722

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:67
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG7789-RA
Protein status:BS06722.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06722.3prime Sequence

944 bp (780 high quality bases) assembled on 2005-12-04

> BS06722.3prime
ATGGTCTAGAAAGCTTTCACTTGGCTCCCACTGCTGCCCGCACCTCGGCG
GGAATCTTTTCCACCAGCGCGGCATGGTCCTGTCCCAGGCTGGCCAGCAC
TCCCTGTCGATTCACGTGCTCCACATCCGCATTGTAGGCGTAGTGCTCGC
CGTTGATGTTGGTGAGGCAGCCGCCCTGGGCCTCTAGAACGGCCTCGGGT
GCGCAGGTGTCCCACTTCTTGCAGCCCGGCGTGGCGAAGACGTACGCGTG
GGCCTTTCCCTCCAGCAGCTGGAGCACTTTGAACCCAGCGCCTCCGACTT
TCAGAACTTCTGTGGATGCGAATGCGTTGAGGGCTTGCTGATGCAGGGCA
TTGGAATGCGAGCGAGTGGTGGTTATGATGAACTGGCCGGCTGGCGCGGG
GACTGCCGTGAATCCTCCCGTGCCCAGACCCTTCAGGCCCCAAATGGTGC
GACCCATTTCGCCATCGGGCTGTTGGTAGAATGGCTGATGAATGATGCCG
CCCACAGCAGCATCCTTCACGGCTATGCCGATCAGGACGGTCACGTGTTC
AACGTGTCCCTGTGTATACTCCGCTGTGCCGTCTAGGGGATCTACCCATA
TGACAAAGTCCTCGGGCTTGACATCCTTCCACTCAGCGGGGCAACTGTGC
TGCAGGAATTCCTCATCCAACTCGTTCACCAGCCAGTCGTCGCAGACATT
CAGATCGGATCCACCCTCCTCGCCAATGATCTTGACGGTGGGGAACTTTT
TGGCCAAGGAGGCGATAATGCAACGCTGGGCAGAGCGATCTGCCTCCGTC
TGCGGATCGTTCTTGCCCTTGTCCACTATGCCCNAGTCACCCTTCTTGAG
CACGTCGCGTATGATGCCGCCAGCCCGCTTGGCGGTGCTGATCGAAGACG
CCATGACGCGCATAATTACCGGAGCAGTTGCAGCCATGTCGACT

BS06722.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG7789-PA 921 CG7789-RA 1..921 937..17 4536 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 01:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7789-RA 1130 CG7789-RA 107..1027 937..17 4564 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 01:18:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29803744..29804286 559..17 2715 100 Minus
3R 32079331 3R 29803302..29803681 937..558 1859 99.2 Minus
Blast to na_te.dros performed on 2015-02-09 01:18:15 has no hits.

BS06722.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:50:04 Download gff for BS06722.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7789-PA 1..921 17..937 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:32:08 Download gff for BS06722.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7789-PA 1..921 17..937 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 05:53:23 Download gff for BS06722.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7789-RA 100..1036 10..944 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:07:45 Download gff for BS06722.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7789-RA 100..1036 10..944 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:07:45 Download gff for BS06722.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29803295..29803680 559..944 98 -> Minus
3R 29803745..29804295 10..558 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 05:53:23 Download gff for BS06722.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25629017..25629402 559..944 98 -> Minus
arm_3R 25629467..25630017 10..558 99   Minus

BS06722.5prime Sequence

921 bp (737 high quality bases) assembled on 2005-12-04

> BS06722.5prime
GAAGTTATCAGTCGACATGGCTGCAACTGCTCCGGTAATTATGCGCGTCA
TGGCGTCCTCGATCAGCACCGCCAAGCGGGCTGGCGGCATCATACGCGAC
GTGCTCAAGAAGGGTGACCTGGGCATAGTGGACAAGGGCAAGAACGATCC
GCAGACGGAGGCAGATCGCTCTGCCCAGCGTTGCATTATCGCCTCCTTGG
CCAAAAAGTTCCCCACCGTCAAGATCATTGGCGAGGAGGGTGGATCCGAT
CTGAATGTCTGCGACGACTGGCTGGTGAACGAGTTGGATGAGGAATTCCT
GCAGCACAGTTGCCCCGCTGAGTGGAAGGATGTCAAGCCCGAGGACTTTG
TCATATGGGTAGATCCCCTAGACGGCACAGCGGAGTATACACAGGGACAC
GTTGAACACGTGACCGTCCTGATCGGCATAGCCGTGAAGGATGCTGCTGT
GGGCGGCATCATTCATCAGCCATTCTACCAACAGCCCGATGGCGAAATGG
GTCGCACCATTTGGGGCCTGAAGGGTCTGGGCACGGGAGGATTCACGGCA
GTCCCCGCGCCAGCCGGCCAGTTCATCATAACCACCACTCGCTCGCATTC
CAATGCCCTGCATCAGCAAGCCCTCAACGCATTCGCATCCACAGAAGTTC
TGAAAGTCGGAGGCGCTGGGTTCAAAGTGCTCCAGCTGCTGGAGGGAAAG
GCCCACGCGTACGTCTTCGCCACGCCGGGCTGCAAGAAGTGGGACACCTG
CGCACCCGAGGCCGTTCTAGAGGCCCAGGGCGGCTGCCTCACCAACATCA
ACGGCGAGCACTACGCCTACAATGCGGATGTGGAGCACGTGAATCGACAG
GGAGTGCTGGCCAGCCTGGGACAGGACCATGCCGCGCTGGTGGAAAAGAT
CCCCGCCGAGGTGCGGGCAGC

BS06722.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG7789-PA 921 CG7789-RA 1..905 17..921 4500 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:02:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7789-RA 1130 CG7789-RA 107..1011 17..921 4510 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:02:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29803744..29804270 395..921 2620 99.8 Plus
3R 32079331 3R 29803302..29803681 17..396 1900 100 Plus
Blast to na_te.dros performed on 2015-02-12 19:02:08 has no hits.

BS06722.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:50:05 Download gff for BS06722.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7789-PA 1..905 17..921 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:32:10 Download gff for BS06722.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7789-PA 1..905 17..921 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:27:44 Download gff for BS06722.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7789-RA 107..1011 17..921 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:28:57 Download gff for BS06722.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7789-RA 107..1011 17..921 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:28:57 Download gff for BS06722.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29803745..29804270 396..921 99   Plus
3R 29803302..29803680 17..395 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:27:44 Download gff for BS06722.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25629024..25629402 17..395 100 -> Plus
arm_3R 25629467..25629992 396..921 99   Plus

BS06722.complete Sequence

953 bp (953 high quality bases) assembled on 2005-12-21

> BS06722.complete
GAAGTTATCAGTCGACATGGCTGCAACTGCTCCGGTAATTATGCGCGTCA
TGGCGTCCTCGATCAGCACCGCCAAGCGGGCTGGCGGCATCATACGCGAC
GTGCTCAAGAAGGGTGACCTGGGCATAGTGGACAAGGGCAAGAACGATCC
GCAGACGGAGGCAGATCGCTCTGCCCAGCGTTGCATTATCGCCTCCTTGG
CCAAAAAGTTCCCCACCGTCAAGATCATTGGCGAGGAGGGTGGATCCGAT
CTGAATGTCTGCGACGACTGGCTGGTGAACGAGTTGGATGAGGAATTCCT
GCAGCACAGTTGCCCCGCTGAGTGGAAGGATGTCAAGCCCGAGGACTTTG
TCATATGGGTAGATCCCCTAGACGGCACAGCGGAGTATACACAGGGACAC
GTTGAACACGTGACCGTCCTGATCGGCATAGCCGTGAAGGATGCTGCTGT
GGGCGGCATCATTCATCAGCCATTCTACCAACAGCCCGATGGCGAAATGG
GTCGCACCATTTGGGGCCTGAAGGGTCTGGGCACGGGAGGATTCACGGCA
GTCCCCGCGCCAGCCGGCCAGTTCATCATAACCACCACTCGCTCGCATTC
CAATGCCCTGCATCAGCAAGCCCTCAACGCATTCGCATCCACAGAAGTTC
TGAAAGTCGGAGGCGCTGGGTTCAAAGTGCTCCAGCTGCTGGAGGGAAAG
GCCCACGCGTACGTCTTCGCCACGCCGGGCTGCAAGAAGTGGGACACCTG
CGCACCCGAGGCCGTTCTAGAGGCCCAGGGCGGCTGCCTCACCAACATCA
ACGGCGAGCACTACGCCTACAATGCGGATGTGGAGCACGTGAATCGACAG
GGAGTGCTGGCCAGCCTGGGACAGGACCATGCCGCGCTGGTGGAAAAGAT
TCCCGCCGAGGTGCGGGCAGCAGTGGGAGCCAAGTGAAAGCTTTCTAGAC
CAT

BS06722.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG7789-RA 921 CG7789-PA 1..921 17..937 4605 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7789-RA 1130 CG7789-RA 107..1027 17..937 4605 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:27:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29803744..29804286 395..937 2715 100 Plus
3R 32079331 3R 29803302..29803681 17..396 1900 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:27:28 has no hits.

BS06722.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:08:34 Download gff for BS06722.complete
Subject Subject Range Query Range Percent Splice Strand
CG7789-RA 1..921 17..937 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:47:51 Download gff for BS06722.complete
Subject Subject Range Query Range Percent Splice Strand
CG7789-RA 106..1035 17..944 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:22 Download gff for BS06722.complete
Subject Subject Range Query Range Percent Splice Strand
CG7789-RA 107..1026 17..936 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:08:35 Download gff for BS06722.complete
Subject Subject Range Query Range Percent Splice Strand
CG7789-RA 106..1035 17..944 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:25:54 Download gff for BS06722.complete
Subject Subject Range Query Range Percent Splice Strand
CG7789-RA 107..1026 17..936 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:25:54 Download gff for BS06722.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29803302..29803680 17..395 100 -> Plus
3R 29803745..29804285 396..936 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:22 Download gff for BS06722.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25629024..25629402 17..395 100 -> Plus
arm_3R 25629467..25630007 396..936 100   Plus

BS06722.pep Sequence

Translation from 16 to 936

> BS06722.pep
MAATAPVIMRVMASSISTAKRAGGIIRDVLKKGDLGIVDKGKNDPQTEAD
RSAQRCIIASLAKKFPTVKIIGEEGGSDLNVCDDWLVNELDEEFLQHSCP
AEWKDVKPEDFVIWVDPLDGTAEYTQGHVEHVTVLIGIAVKDAAVGGIIH
QPFYQQPDGEMGRTIWGLKGLGTGGFTAVPAPAGQFIITTTRSHSNALHQ
QALNAFASTEVLKVGGAGFKVLQLLEGKAHAYVFATPGCKKWDTCAPEAV
LEAQGGCLTNINGEHYAYNADVEHVNRQGVLASLGQDHAALVEKIPAEVR
AAVGAK*

BS06722.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG7789-PA 306 CG7789-PA 1..306 1..306 1601 100 Plus
CG15743-PB 355 CG15743-PB 57..343 8..295 360 33.1 Plus
CG15743-PC 355 CG15743-PC 57..343 8..295 360 33.1 Plus
CG15743-PA 355 CG15743-PA 57..343 8..295 360 33.1 Plus
Ipp-PA 375 CG3028-PA 159..319 113..256 157 27.4 Plus