Clone BS06741 Report

Search the DGRC for BS06741

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:67
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptAats-asp-RA
Protein status:BS06741.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06741.3prime Sequence

900 bp (892 high quality bases) assembled on 2005-12-04

> BS06741.3prime
ATGGTCTAGAAAGCTTTTAAGGCGTTAATCGTTTGGGATCGCGCGGGAAC
ATGGAAGTCTTGCGGATGTTGTCCAATCCCAGATACAGCATCACCACACG
CTCCATTCCAATGCCACCACCAGCATGTGGAGGACATCCATAGCGGAAGG
ACTCGATGTACGCCGCAATCTTGGAGGTATCAATGCCATGGTGCTTGGCT
CGTTCGATTAAGTACTCGGGATCGTGGATACGCTGCGCGCCGGACAGGAT
CTCCTCGCCGCGCATGAACATATCGTAAGAGTTGGAGTAGACCGGATTGT
TTGGATCAGGCATCGTGTAGAAGGGCCGTATCGCTAACGGGAACTTGTCA
AGGATGTAGAAGTCAGTGTCGTACTTGGCCTTGACCAGGCGACCCAACAG
CTTTTCGTTGGGCGTAGACAGATCCTCCTCGTCGCCGGTCTCCACACCAG
CCTCGCGCAACATGGCCACGCCATCGGCGAACTGGAGGATCAGTGGTGGC
TCCAGGAACTTGAAGGCATCCACCTTGTACTGCTGGCCTACAGATTCGAT
TTCCTTAGCGTACTTATCACGCAGTCCCTTGAAAATGGACGTAAACGTGT
TGCCAATCGTGTGCAGCACCTCGTGGTAGTGGTACTTAAAGGCCATTTCC
AGATCAAGGCCTACGAACTCGGTCAAATGCCGATGAGTGTTCGAATCCTC
TGCACGGAACACGGCTCCTACGGTATAGACCTTGTCAAAATCGGCGGCGA
TGGCCATCTGCTTGTACAGCTGCGGCGACTGCGCCAGATAGGCTGAATCC
TTGAAGTAGCTCACGGTGAACACATTGGCGCCTCCCTCACTGGCCGCTGA
AATGATCTTCGGCGTGTGAATCTCTGTGAAGCCCTGCTCAGTGAGAATAT

BS06741.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG3821-PA 1596 Aats-asp-RA 713..1596 900..17 4420 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:18:03
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-RB 2246 CG3821-RB 1100..1983 900..17 4420 100 Minus
Aats-asp-RC 1899 CG3821-RC 753..1636 900..17 4420 100 Minus
Aats-asp-RA 1976 CG3821-RA 830..1713 900..17 4420 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12881813..12882532 900..181 3600 100 Minus
2R 25286936 2R 12882741..12882905 181..17 825 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:18:01 has no hits.

BS06741.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:50:40 Download gff for BS06741.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3821-PA 713..1596 17..900 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:00 Download gff for BS06741.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3821-PA 713..1596 17..900 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:35:08 Download gff for BS06741.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 830..1715 13..900 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:35:43 Download gff for BS06741.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 830..1715 13..900 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:35:43 Download gff for BS06741.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12881813..12882532 181..900 100 -> Minus
2R 12882742..12882907 13..180 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:35:08 Download gff for BS06741.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8769318..8770037 181..900 100 -> Minus
arm_2R 8770247..8770412 13..180 98   Minus

BS06741.5prime Sequence

932 bp (848 high quality bases) assembled on 2005-12-04

> BS06741.5prime
GAAGTTATCAGTCGACATGGTCGAGGACAAAGAGCAAGTGGCCAACGGGG
AGCAGGTCTCCAAGAAGGGAGCCAAAAAGCTGGCCAAGGCCGCTAAGAAA
GCCGAACAAAAAGCGGAGAACGCCTCCACCGCGGCGGCCAATAACGCTGG
TGGCGATTCTGCGGAGGATCACGCCGCCGGAAGATATGGCCTCTCGGAAA
TGATCCAATCCAAGGACAAACGCAGTGAACGCAACTTTGTCCCGGTTTCG
GAACTAAGCGGTCAGGTGGGCAAAGGGCTGGTCTGGGTGCGAGGACGCGT
CCACACTTCGAGAGCCAAGGGAAAGCAGTGCTTCCTCATCCTGCGCCAGC
AGAGCAGCACGGTGCAGTGCATCCTGGCTGTCGGTGATGTTATCTCCAAA
CAGATGGTCAAATTTGCGGGAAATATCCCTAAGGAGAGCATTATTGATAT
CCAGGCCAAGCCAGTGGCGGTGTCTAGCAAGATTGAATCCTGCACAGAGC
AGTCGCTGGAATTGTCCGTCGAGCAGATATTCGTAATATCCCAGGCCAAG
GCACAGTTGCCATTGCAAATCGAGGATGCATCGCGTCCCGAGAACGCCGA
TGATGCGGAAGGTCTGAATATTCGCGTGAACCAGGACACGCGCTTGGACA
ACCGAGTGCTCGACCTGAGGACCCCGGCAAATCAGGCCATTTTCCGACTG
GAAGCCGGAGTATGTCGCCTGTTCCGCGATATTCTCACTGAGCAGGGCTT
CACAGAGATTCACACGCCGAAGATCATTTCAGCGGCCAGTGAGGGAGGCG
CCAATGTGTTCACCGTGAGCTACTTCAAGGATTCAGCCTATCTGGCGCAG
TCGCCGCAGCTGTACAAGCAGATGGCCATCGCCGCCGATTTTGACAAGTC
TATACCGTAGGAGCCGTGTTCGTGCAGAGGAT

BS06741.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG3821-PA 1596 Aats-asp-RA 1..882 17..898 4385 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:57:36
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-RB 2246 CG3821-RB 388..1305 17..932 4525 99.7 Plus
Aats-asp-RC 1899 CG3821-RC 41..958 17..932 4525 99.7 Plus
Aats-asp-RA 1976 CG3821-RA 118..1035 17..932 4525 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:57:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12881508..12882018 424..932 2455 99.6 Plus
2R 25286936 2R 12880948..12881275 96..423 1625 99.7 Plus
2R 25286936 2R 12880790..12880870 17..97 405 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:57:34 has no hits.

BS06741.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:50:41 Download gff for BS06741.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3821-PA 1..918 17..932 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:01 Download gff for BS06741.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3821-PA 1..918 17..932 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:37:13 Download gff for BS06741.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 109..1035 9..932 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:35:18 Download gff for BS06741.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 109..1035 9..932 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:35:18 Download gff for BS06741.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12880781..12880870 9..97 95 -> Plus
2R 12880950..12881275 98..423 99 -> Plus
2R 12881508..12882018 424..932 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:37:13 Download gff for BS06741.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8768286..8768375 9..97 95 -> Plus
arm_2R 8768455..8768780 98..423 99 -> Plus
arm_2R 8769013..8769523 424..932 99   Plus

BS06741.complete Sequence

1628 bp (1628 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635604

> BS06741.complete
GAAGTTATCAGTCGACATGGTCGAGGACAAAGAGCAAGTGGCCAACGGGG
AGCAGGTCTCCAAGAAGGGAGCCAAAAAGCTGGCCAAGGCCGCTAAGAAA
GCCGAACAAAAAGCGGAGAACGCCTCCACCGCGGCGGCCAATAACGCTGG
TGGCGATTCTGCGGAGGATCACGCCGCCGGAAGATATGGCCTCTCGGAAA
TGATCCAATCCAAGGACAAACGCAGTGAACGCAACTTTGTCCCGGTTTCG
GAACTAAGCGGTCAGGTGGGCAAAGGGCTGGTCTGGGTGCGAGGACGCGT
CCACACTTCGAGAGCCAAGGGAAAGCAGTGCTTCCTCATCCTGCGCCAGC
AGAGCAGCACGGTGCAGTGCATCCTGGCTGTCGGTGATGTTATCTCCAAA
CAGATGGTCAAATTTGCGGGAAATATCCCTAAGGAGAGCATTATTGATAT
CCAGGCCAAGCCAGTGGCGGTGTCTAGCAAGATTGAATCCTGCACAGAGC
AGTCGCTGGAATTGTCCGTCGAGCAGATATTCGTAATATCCCAGGCCAAG
GCACAGTTGCCATTGCAAATCGAGGATGCATCGCGTCCCGAGAACGCCGA
TGATGCGGAAGGTCTGAATATTCGCGTGAACCAGGACACGCGCTTGGACA
ACCGAGTGCTCGACCTGAGGACCCCGGCAAATCAGGCCATTTTCCGACTG
GAAGCCGGAGTATGTCGCCTGTTCCGCGATATTCTCACTGAGCAGGGCTT
CACAGAGATTCACACGCCGAAGATCATTTCAGCGGCCAGTGAGGGAGGCG
CCAATGTGTTCACCGTGAGCTACTTCAAGGATTCAGCCTATCTGGCGCAG
TCGCCGCAGCTGTACAAGCAGATGGCCATCGCCGCCGATTTTGACAAGGT
CTATACCGTAGGAGCCGTGTTCCGTGCAGAGGATTCGAACACTCATCGGC
ATTTGACCGAGTTCGTAGGCCTTGATCTGGAAATGGCCTTTAAGTACCAC
TACCACGAGGTGCTGCACACGATTGGCAACACGTTTACGTCCATTTTCAA
GGGACTGCGTGATAAGTACGCTAAGGAAATCGAATCTGTAGGCCAGCAGT
ACAAGGTGGATGCCTTCAAGTTCCTGGAGCCACCACTGATCCTCCAGTTC
GCCGATGGCGTGGCCATGTTGCGCGAGGCTGGTGTGGAGACCGGCGACGA
GGAGGATCTGTCTACGCCCAACGAAAAGCTGTTGGGTCGCCTGGTCAAGG
CCAAGTACGACACTGACTTCTACATCCTTGACAAGTTCCCGTTAGCGATA
CGGCCCTTCTACACGATGCCTGATCCAAACAATCCGGTCTACTCCAACTC
TTACGATATGTTCATGCGCGGCGAGGAGATCCTGTCCGGCGCGCAGCGTA
TCCACGATCCCGAGTACTTAATCGAACGAGCCAAGCACCATGGCATTGAT
ACCTCCAAGATTGCGGCGTACATCGAGTCCTTCCGCTATGGATGTCCTCC
ACATGCTGGTGGTGGCATTGGAATGGAGCGTGTGGTGATGCTGTATCTGG
GATTGGACAACATCCGCAAGACTTCCATGTTCCCGCGCGATCCCAAACGA
TTAACGCCTTAAAAGCTTTCTAGACCAT

BS06741.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-RB 1596 CG3821-PB 1..1596 17..1612 7965 99.9 Plus
Aats-asp-RC 1596 CG3821-PC 1..1596 17..1612 7965 99.9 Plus
Aats-asp-RA 1596 CG3821-PA 1..1596 17..1612 7965 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:08:25
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-RB 2246 CG3821-RB 388..1983 17..1612 7965 99.9 Plus
Aats-asp-RC 1899 CG3821-RC 41..1636 17..1612 7965 99.9 Plus
Aats-asp-RA 1976 CG3821-RA 118..1713 17..1612 7965 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12881508..12882532 424..1448 5125 100 Plus
2R 25286936 2R 12880948..12881275 96..423 1625 99.7 Plus
2R 25286936 2R 12882741..12882905 1448..1612 825 100 Plus
2R 25286936 2R 12880790..12880870 17..97 405 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:08:23 has no hits.

BS06741.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:11:51 Download gff for BS06741.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 1..1596 17..1612 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:51:40 Download gff for BS06741.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 74..1680 9..1616 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:40:07 Download gff for BS06741.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 118..1711 17..1610 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:11:52 Download gff for BS06741.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 74..1680 9..1616 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:34 Download gff for BS06741.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-asp-RA 118..1711 17..1610 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:45:34 Download gff for BS06741.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12880790..12880870 17..97 100 -> Plus
2R 12880950..12881275 98..423 99 -> Plus
2R 12881508..12882532 424..1448 100 -> Plus
2R 12882742..12882903 1449..1610 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:40:07 Download gff for BS06741.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8768295..8768375 17..97 100 -> Plus
arm_2R 8768455..8768780 98..423 99 -> Plus
arm_2R 8769013..8770037 424..1448 100 -> Plus
arm_2R 8770247..8770408 1449..1610 100   Plus

BS06741.pep Sequence

Translation from 16 to 1611

> BS06741.pep
MVEDKEQVANGEQVSKKGAKKLAKAAKKAEQKAENASTAAANNAGGDSAE
DHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRA
KGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQAKPV
AVSSKIESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENADDAEGL
NIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHT
PKIISAASEGGANVFTVSYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGA
VFRAEDSNTHRHLTEFVGLDLEMAFKYHYHEVLHTIGNTFTSIFKGLRDK
YAKEIESVGQQYKVDAFKFLEPPLILQFADGVAMLREAGVETGDEEDLST
PNEKLLGRLVKAKYDTDFYILDKFPLAIRPFYTMPDPNNPVYSNSYDMFM
RGEEILSGAQRIHDPEYLIERAKHHGIDTSKIAAYIESFRYGCPPHAGGG
IGMERVVMLYLGLDNIRKTSMFPRDPKRLTP*

BS06741.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-asp-PB 531 CG3821-PB 1..531 1..531 2713 100 Plus
Aats-asp-PC 531 CG3821-PC 1..531 1..531 2713 100 Plus
Aats-asp-PA 531 CG3821-PA 1..531 1..531 2713 100 Plus
Aats-asn-PB 558 CG10687-PB 84..558 15..531 349 25 Plus
Aats-asn-PA 558 CG10687-PA 84..558 15..531 349 25 Plus