Clone Sequence Records
BS06747.3prime Sequence
342 bp (341 high quality bases) assembled on 2005-12-04
> BS06747.3prime
ATGGTCTAGAAAGCTTTCACTTTAGGTTCACCTTGATTTCGAAGGTCTTG
TAGGTGTATTCCTGGATGACTTTCAGATTCTTAATAATGAACTCCTTGAT
GGCCTGCACGTAATCGGCGGCGGCCAGGATGAGCTTCTTAAAGGCATCGA
TCACCTTGCCCTCGCCCTCCAGACGACCCTTGAACTTCTCCTCCGACACC
TGGGCAATGAATCCCCGCAGTCCCAGTGCATTGGCCTGGACCAGTGCAAA
CAGCTCGAAAGCATCCTTGGGCACCCTGCCACGCACCTCAAAGTCACAGC
ACAAGATCTCCTCCTTTTGGCCTGCCATGTCGACTGATAACT
BS06747.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-PA | 312 | CG10970-RA | 1..312 | 328..17 | 1560 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:07:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-RB | 1810 | CG10970-RB | 1339..1655 | 333..17 | 1570 | 99.7 | Minus |
CG10970-RA | 589 | CG10970-RA | 121..437 | 333..17 | 1570 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:07:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9069754..9070070 | 17..333 | 1570 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:07:45 has no hits.
BS06747.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:50:51 Download gff for
BS06747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-PA | 1..312 | 17..328 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:14 Download gff for
BS06747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-PA | 1..312 | 17..328 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 21:28:19 Download gff for
BS06747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 22..344 | 11..340 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:56:44 Download gff for
BS06747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 117..439 | 11..340 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:56:44 Download gff for
BS06747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9069752..9070074 | 11..340 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 21:28:19 Download gff for
BS06747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8963785..8964107 | 11..340 | 97 | | Plus |
BS06747.5prime Sequence
342 bp (341 high quality bases) assembled on 2005-12-04
> BS06747.5prime
GAAGTTATCAGTCGACATGGCAGGCCAAAAGGAGGAGATCTTGTGCTGTG
ACTTTGAGGTGCGTGGCAGGGTGCCCAAGGATGCTTTCGAGCTGTTTGCA
CTGGTCCAGGCCAATGCACTGGGACTGCGGGGATTCATTGCCCAGGTGTC
GGAGGAGAAGTTCAAGGGTCGTCTGGAGGGCGAGGGCAAGGTGATCGATG
CCTTTAAGAAGCTCATCCTGGCCGCCGCCGATTACGTGCAGGCCATCAAG
GAGTTCATTATTAAGAATCTGAAAGTCATCCAGGAATACACCTACAAGAC
CTTCGAAATCAAGGTGAACCTAAAGTGAAAGCTTTCTAGACC
BS06747.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-PA | 312 | CG10970-RA | 1..312 | 17..328 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:28:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-RB | 1810 | CG10970-RB | 1339..1655 | 12..328 | 1570 | 99.7 | Plus |
CG10970-RA | 589 | CG10970-RA | 121..437 | 12..328 | 1570 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:27:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9069754..9070070 | 328..12 | 1570 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-12 07:28:00 has no hits.
BS06747.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:50:52 Download gff for
BS06747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-PA | 1..312 | 17..328 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:16 Download gff for
BS06747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-PA | 1..312 | 17..328 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 17:22:27 Download gff for
BS06747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 22..344 | 5..334 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:02:33 Download gff for
BS06747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 117..439 | 5..334 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:02:33 Download gff for
BS06747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9069752..9070074 | 5..334 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 17:22:27 Download gff for
BS06747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8963785..8964107 | 5..334 | 97 | | Minus |
BS06747.complete Sequence
344 bp (344 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635606
> BS06747.complete
GAAGTTATCAGTCGACATGGCAGGCCAAAAGGAGGAGATCTTGTGCTGTG
ACTTTGAGGTGCGTGGCAGGGTGCCCAAGGATGCTTTCGAGCTGTTTGCA
CTGGTCCAGGCCAATGCACTGGGACTGCGGGGATTCATTGCCCAGGTGTC
GGAGGAGAAGTTCAAGGGTCGTCTGGAGGGCGAGGGCAAGGTGATCGATG
CCTTTAAGAAGCTCATCCTGGCCGCCGCCGATTACGTGCAGGCCATCAAG
GAGTTCATTATTAAGAATCTGAAAGTCATCCAGGAATACACCTACAAGAC
CTTCGAAATCAAGGTGAACCTAAAGTGAAAGCTTTCTAGACCAT
BS06747.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-RB | 312 | CG10970-PB | 1..312 | 17..328 | 1560 | 100 | Plus |
CG10970-RA | 312 | CG10970-PA | 1..312 | 17..328 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-RB | 1810 | CG10970-RB | 1339..1655 | 12..328 | 1570 | 99.7 | Plus |
CG10970-RA | 589 | CG10970-RA | 121..437 | 12..328 | 1570 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9069754..9070070 | 328..12 | 1570 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:02 has no hits.
BS06747.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:47 Download gff for
BS06747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 1..312 | 17..328 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:51:24 Download gff for
BS06747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 1335..1657 | 5..334 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:34 Download gff for
BS06747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 31..341 | 17..327 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:48 Download gff for
BS06747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 1335..1657 | 5..334 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:51 Download gff for
BS06747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10970-RA | 126..436 | 17..327 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:51 Download gff for
BS06747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9069755..9070065 | 17..327 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:34 Download gff for
BS06747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8963788..8964098 | 17..327 | 100 | | Minus |
BS06747.pep Sequence
Translation from 16 to 327
> BS06747.pep
MAGQKEEILCCDFEVRGRVPKDAFELFALVQANALGLRGFIAQVSEEKFK
GRLEGEGKVIDAFKKLILAAADYVQAIKEFIIKNLKVIQEYTYKTFEIKV
NLK*
BS06747.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:18:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10970-PB | 103 | CG10970-PB | 1..103 | 1..103 | 514 | 100 | Plus |
CG10970-PA | 103 | CG10970-PA | 1..103 | 1..103 | 514 | 100 | Plus |