Clone Sequence Records
BS06751.3prime Sequence
911 bp (791 high quality bases) assembled on 2005-12-04
> BS06751.3prime
ATGGTCTAGAAAGCTTTTATTTGCTAACGTTGCCCTCCTCGTTCGCAGAA
TTATTCAGATCACTGTTGTTGCAAGTATCGCCAACGGATGCGCCAACGTT
TGCGACATAAAGGGCGGGGTCTATGACCTTCGGAATAGGCTTTATTTCGG
TTCCAAGTTCTTTTTCAATCCGATGCAGATCAAACCGATCCTCGTAGGTT
ATCAGATTAATAGCAATACCCAAATGACCGAAACGTCCTGAGCGACCAAT
TCGATGCAAGTATGTCTCTGCCATTCGTGGGAAATCGAAATTGATTACTA
CATTCACGGCCTGCACGTCGATACCACGGGTGAACAGGTCGGAGCACACC
AGATTGCGACAGAGTCCTTGGCGGAAATCGTGGAATACTCGATTTCTGTG
TGCCTGGGCCATCTTAGCGTGTATATAGTAACAGCAATATCCAAGCTCTG
TGATCTTTTTGGCCAATAGCTCGACACGTTGCGTGGAATTGCAGAATATG
ATAGACTGATTGATCTGCAGCTTCGAAAAGAGCGTATTCAAGCAGTGTAC
TTTCTGGCGCTCCTGTACGAATGCATAGTACTGAGTGACACCCTTCAGTG
TTAGCTCCTCCATCAGGTTGATCTCGTAAGGCTCGCGTAAATGCTTCTCC
ATGAAATTCTTGACTGTTAGTGGAAATGTTGCGGAAAATAGCAAGATCTG
TGGATCCTTTGGTAACTTTAGTATAACATGATCCAGCATGCCTTGAAAAT
CAAGCGACAATAGCTTATCGGCCTCATCCAAAACTAATATTCTGNCATGC
GACATATCGGCAACTTTCTTATCCATCAGATCTAATATTCGTCCGGGAGT
GGCAATATTAATTGTACTTTTTGATAAATACGAAGAATGTCATCCTTTAG
AATGGTACCTC
BS06751.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4916-PA | 1380 | me31B-RA | 540..1380 | 857..17 | 4161 | 99.7 | Minus |
CG4916-PB | 1287 | me31B-RB | 447..1287 | 857..17 | 4161 | 99.7 | Minus |
CG4916-PA | 1380 | me31B-RA | 485..539 | 911..857 | 275 | 100 | Minus |
CG4916-PB | 1287 | me31B-RB | 392..446 | 911..857 | 275 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:47:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
me31B-RB | 1600 | CG4916-RB | 581..1478 | 911..15 | 4439 | 99.7 | Minus |
me31B-RA | 1699 | CG4916-RA | 680..1577 | 911..15 | 4439 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:47:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10241131..10241782 | 868..218 | 3184 | 99.5 | Minus |
2L | 23513712 | 2L | 10241845..10242050 | 220..15 | 1030 | 100 | Minus |
2L | 23513712 | 2L | 10241014..10241058 | 911..867 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:47:26 has no hits.
BS06751.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:50:59 Download gff for
BS06751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-PA | 485..1380 | 17..911 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:26 Download gff for
BS06751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4916-PB | 392..1287 | 17..911 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:41:53 Download gff for
BS06751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-RA | 680..1577 | 15..911 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:09 Download gff for
BS06751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-RA | 680..1577 | 15..911 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:09 Download gff for
BS06751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10241846..10242050 | 15..219 | 100 | | Minus |
2L | 10241014..10241058 | 867..911 | 100 | -> | Minus |
2L | 10241133..10241780 | 220..866 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:41:53 Download gff for
BS06751.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10241014..10241058 | 867..911 | 100 | -> | Minus |
arm_2L | 10241133..10241780 | 220..866 | 99 | -> | Minus |
arm_2L | 10241846..10242050 | 15..219 | 100 | | Minus |
BS06751.5prime Sequence
881 bp (802 high quality bases) assembled on 2005-12-04
> BS06751.5prime
GAAGTTATCAGTCGACATGATGACTGAAAAGTTAAATTCTGGGCACACTA
ATTTAACAAGCAAGGGGATTATAAATGATCTTCAAATTGCTGGAAACACA
AGTGACGATATGGGCTGGAAATCAAAGCTGAAGCTGCCGCCAAAGGACAA
CCGATTCAAAACAACTGATGTGACCGATACGCGAGGCAATGAATTCGAGG
AGTTTTGCCTTAAAAGAGAACTGCTTATGGGTATATTCGAGAAGGGATGG
GAGCGCCCTTCGCCAATTCAGGAAGCAGCTATTCCTATAGCATTAAGTGG
AAAAGATGTGCTGGCTCGGGCCAAGAACGGCACAGGCAAGACAGGAGCCT
ACTGCATCCCAGTTTTAGAACAAATCGACCCAACCAAGGACTACATTCAG
GCACTTGTGATGGTCCCCACCCGAGAGTTGGCGCTACAAACCTCACAGAT
ATGTATTGAGCTGGCGAAACATCTTGATATCCGGGTAATGGTCACAACGG
GAGGTACCATTCTAAAGGATGACATTCTTCGTATTTATCAAAAAGTACAA
TTAATTATTGCCACTCCCGGACGAATATTAGATCTGATGGATAAGAAAGT
TGCCGATATGTCGCATTGCAGAATATTAGTTTTGGATGAGGCCGATAAGC
TATTGTCGCTTGATTTTCAAGGCATGCTGGATCATGTTATACTAAAGTTA
CCAAAGGATCCACAGATCTTGCTATTTTCCGCAACATTTCCACTAACAGT
CAAGAATTTCATGGAGAAGCATTTACGCGAGCCTTACGAGATCAACCTGA
TGGAGGAGCTAACACTGAANGGTGTCACTCAGTACTATGCATTCGTACAG
GAGCGCCAGAAAGTACACTGCTTGAATACGC
BS06751.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4916-PA | 1380 | me31B-RA | 1..865 | 17..881 | 4306 | 99.8 | Plus |
CG4916-PB | 1287 | me31B-RB | 1..772 | 110..881 | 3841 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:38:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
me31B-RA | 1699 | CG4916-RA | 196..1060 | 17..881 | 4314 | 99.9 | Plus |
me31B-RB | 1600 | CG4916-RB | 146..961 | 66..881 | 4069 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:38:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10240680..10241058 | 167..545 | 1895 | 100 | Plus |
2L | 23513712 | 2L | 10241131..10241468 | 544..881 | 1679 | 99.7 | Plus |
2L | 23513712 | 2L | 10240491..10240592 | 66..167 | 510 | 100 | Plus |
2L | 23513712 | 2L | 10239536..10239586 | 17..67 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:38:44 has no hits.
BS06751.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:51:00 Download gff for
BS06751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-PA | 1..865 | 17..881 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:27 Download gff for
BS06751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4916-PA | 1..865 | 17..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:08:06 Download gff for
BS06751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-RA | 196..1060 | 17..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:12:31 Download gff for
BS06751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-RA | 196..1060 | 17..881 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:12:31 Download gff for
BS06751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10239536..10239585 | 17..66 | 100 | -> | Plus |
2L | 10240492..10240591 | 67..166 | 100 | -> | Plus |
2L | 10240680..10241058 | 167..545 | 100 | -> | Plus |
2L | 10241133..10241468 | 546..881 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:08:06 Download gff for
BS06751.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10239536..10239585 | 17..66 | 100 | -> | Plus |
arm_2L | 10240492..10240591 | 67..166 | 100 | -> | Plus |
arm_2L | 10240680..10241058 | 167..545 | 100 | -> | Plus |
arm_2L | 10241133..10241468 | 546..881 | 99 | | Plus |
BS06751.complete Sequence
1412 bp (1412 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635608
> BS06751.complete
GAAGTTATCAGTCGACATGATGACTGAAAAGTTAAATTCTGGGCACACTA
ATTTAACAAGCAAGGGGATTATAAATGATCTTCAAATTGCTGGAAACACA
AGTGACGATATGGGCTGGAAATCAAAGCTGAAGCTGCCGCCAAAGGACAA
CCGATTCAAAACAACTGATGTGACCGATACGCGAGGCAATGAATTCGAGG
AGTTTTGCCTTAAAAGAGAACTGCTTATGGGTATATTCGAGAAGGGATGG
GAGCGCCCTTCGCCAATTCAGGAAGCAGCTATTCCTATAGCATTAAGTGG
AAAAGATGTGCTGGCTCGGGCCAAGAACGGCACAGGCAAGACAGGAGCCT
ACTGCATCCCAGTTTTAGAACAAATCGACCCAACCAAGGACTACATTCAG
GCACTTGTGATGGTCCCCACCCGAGAGTTGGCGCTACAAACCTCACAGAT
ATGTATTGAGCTGGCGAAACATCTTGATATCCGGGTAATGGTCACAACGG
GAGGTACCATTCTAAAGGATGACATTCTTCGTATTTATCAAAAAGTACAA
TTAATTATTGCCACTCCCGGACGAATATTAGATCTGATGGATAAGAAAGT
TGCCGATATGTCGCATTGCAGAATATTAGTTTTGGATGAGGCCGATAAGC
TATTGTCGCTTGATTTTCAAGGCATGCTGGATCATGTTATACTAAAGTTA
CCAAAGGATCCACAGATCTTGCTATTTTCCGCAACATTTCCACTAACAGT
CAAGAATTTCATGGAGAAGCATTTACGCGAGCCTTACGAGATCAACCTGA
TGGAGGAGCTAACACTGAAGGGTGTCACTCAGTACTATGCATTCGTACAG
GAGCGCCAGAAAGTACACTGCTTGAATACGCTCTTTTCGAAGCTGCAGAT
CAATCAGTCTATCATATTCTGCAATTCCACGCAACGTGTCGAGCTATTGG
CCAAAAAGATCACAGAGCTTGGATATTGCTGTTACTATATACACGCTAAG
ATGGCCCAGGCACACAGAAATCGAGTATTCCACGATTTCCGCCAAGGACT
CTGTCGCAATCTGGTGTGCTCCGACCTGTTCACCCGTGGTATCGACGTGC
AGGCCGTGAATGTAGTAATCAATTTCGATTTCCCACGAATGGCAGAGACA
TACTTGCATCGAATTGGTCGCTCAGGACGTTTCGGTCATTTGGGTATTGC
TATTAATCTGATAACCTACGAGGATCGGTTTGATCTGCATCGGATTGAAA
AAGAACTTGGAACCGAAATAAAGCCTATTCCGAAGGTCATAGACCCCGCC
CTTTATGTCGCAAACGTTGGCGCATCCGTTGGCGATACTTGCAACAACAG
TGATCTGAATAATTCTGCGAACGAGGAGGGCAACGTTAGCAAATAAAAGC
TTTCTAGACCAT
BS06751.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:34:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
me31B-RA | 1380 | CG4916-PA | 1..1380 | 17..1396 | 6900 | 100 | Plus |
me31B-RB | 1287 | CG4916-PB | 1..1287 | 110..1396 | 6435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:34:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
me31B-RA | 1699 | CG4916-RA | 196..1577 | 17..1398 | 6910 | 100 | Plus |
me31B-RB | 1600 | CG4916-RB | 146..1478 | 66..1398 | 6665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:34:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10241131..10241782 | 544..1195 | 3260 | 100 | Plus |
2L | 23513712 | 2L | 10240680..10241058 | 167..545 | 1895 | 100 | Plus |
2L | 23513712 | 2L | 10241845..10242050 | 1193..1398 | 1030 | 100 | Plus |
2L | 23513712 | 2L | 10240491..10240592 | 66..167 | 510 | 100 | Plus |
2L | 23513712 | 2L | 10239536..10239586 | 17..67 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:34:23 has no hits.
BS06751.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:49:13 Download gff for
BS06751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-RA | 1..1380 | 17..1396 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:37:30 Download gff for
BS06751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-RA | 211..1592 | 17..1398 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:30:31 Download gff for
BS06751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-RA | 196..1573 | 17..1394 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:49:13 Download gff for
BS06751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-RA | 211..1592 | 17..1398 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:48:21 Download gff for
BS06751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
me31B-RA | 196..1573 | 17..1394 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:48:21 Download gff for
BS06751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10240492..10240591 | 67..166 | 100 | -> | Plus |
2L | 10239536..10239585 | 17..66 | 100 | -> | Plus |
2L | 10240680..10241058 | 167..545 | 100 | -> | Plus |
2L | 10241133..10241780 | 546..1193 | 100 | -> | Plus |
2L | 10241846..10242046 | 1194..1394 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:30:31 Download gff for
BS06751.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10240492..10240591 | 67..166 | 100 | -> | Plus |
arm_2L | 10239536..10239585 | 17..66 | 100 | -> | Plus |
arm_2L | 10240680..10241058 | 167..545 | 100 | -> | Plus |
arm_2L | 10241133..10241780 | 546..1193 | 100 | -> | Plus |
arm_2L | 10241846..10242046 | 1194..1394 | 100 | | Plus |
BS06751.pep Sequence
Translation from 16 to 1395
> BS06751.pep
MMTEKLNSGHTNLTSKGIINDLQIAGNTSDDMGWKSKLKLPPKDNRFKTT
DVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLA
RAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELA
KHLDIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSH
CRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFME
KHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLV
CSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLIT
YEDRFDLHRIEKELGTEIKPIPKVIDPALYVANVGASVGDTCNNSDLNNS
ANEEGNVSK*
BS06751.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:34:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
me31B-PA | 459 | CG4916-PA | 1..459 | 1..459 | 2381 | 100 | Plus |
me31B-PB | 428 | CG4916-PB | 1..428 | 32..459 | 2223 | 100 | Plus |
eIF-4a-PF | 403 | CG9075-PF | 30..396 | 58..422 | 705 | 40.1 | Plus |
eIF-4a-PE | 403 | CG9075-PE | 30..396 | 58..422 | 705 | 40.1 | Plus |
eIF-4a-PD | 403 | CG9075-PD | 30..396 | 58..422 | 705 | 40.1 | Plus |