Clone BS06751 Report

Search the DGRC for BS06751

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:67
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptme31B-RA
Protein status:BS06751.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06751.3prime Sequence

911 bp (791 high quality bases) assembled on 2005-12-04

> BS06751.3prime
ATGGTCTAGAAAGCTTTTATTTGCTAACGTTGCCCTCCTCGTTCGCAGAA
TTATTCAGATCACTGTTGTTGCAAGTATCGCCAACGGATGCGCCAACGTT
TGCGACATAAAGGGCGGGGTCTATGACCTTCGGAATAGGCTTTATTTCGG
TTCCAAGTTCTTTTTCAATCCGATGCAGATCAAACCGATCCTCGTAGGTT
ATCAGATTAATAGCAATACCCAAATGACCGAAACGTCCTGAGCGACCAAT
TCGATGCAAGTATGTCTCTGCCATTCGTGGGAAATCGAAATTGATTACTA
CATTCACGGCCTGCACGTCGATACCACGGGTGAACAGGTCGGAGCACACC
AGATTGCGACAGAGTCCTTGGCGGAAATCGTGGAATACTCGATTTCTGTG
TGCCTGGGCCATCTTAGCGTGTATATAGTAACAGCAATATCCAAGCTCTG
TGATCTTTTTGGCCAATAGCTCGACACGTTGCGTGGAATTGCAGAATATG
ATAGACTGATTGATCTGCAGCTTCGAAAAGAGCGTATTCAAGCAGTGTAC
TTTCTGGCGCTCCTGTACGAATGCATAGTACTGAGTGACACCCTTCAGTG
TTAGCTCCTCCATCAGGTTGATCTCGTAAGGCTCGCGTAAATGCTTCTCC
ATGAAATTCTTGACTGTTAGTGGAAATGTTGCGGAAAATAGCAAGATCTG
TGGATCCTTTGGTAACTTTAGTATAACATGATCCAGCATGCCTTGAAAAT
CAAGCGACAATAGCTTATCGGCCTCATCCAAAACTAATATTCTGNCATGC
GACATATCGGCAACTTTCTTATCCATCAGATCTAATATTCGTCCGGGAGT
GGCAATATTAATTGTACTTTTTGATAAATACGAAGAATGTCATCCTTTAG
AATGGTACCTC

BS06751.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG4916-PA 1380 me31B-RA 540..1380 857..17 4161 99.7 Minus
CG4916-PB 1287 me31B-RB 447..1287 857..17 4161 99.7 Minus
CG4916-PA 1380 me31B-RA 485..539 911..857 275 100 Minus
CG4916-PB 1287 me31B-RB 392..446 911..857 275 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:47:30
Subject Length Description Subject Range Query Range Score Percent Strand
me31B-RB 1600 CG4916-RB 581..1478 911..15 4439 99.7 Minus
me31B-RA 1699 CG4916-RA 680..1577 911..15 4439 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:47:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10241131..10241782 868..218 3184 99.5 Minus
2L 23513712 2L 10241845..10242050 220..15 1030 100 Minus
2L 23513712 2L 10241014..10241058 911..867 225 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:47:26 has no hits.

BS06751.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:50:59 Download gff for BS06751.3prime
Subject Subject Range Query Range Percent Splice Strand
me31B-PA 485..1380 17..911 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:26 Download gff for BS06751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4916-PB 392..1287 17..911 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:41:53 Download gff for BS06751.3prime
Subject Subject Range Query Range Percent Splice Strand
me31B-RA 680..1577 15..911 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:09 Download gff for BS06751.3prime
Subject Subject Range Query Range Percent Splice Strand
me31B-RA 680..1577 15..911 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:09 Download gff for BS06751.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10241846..10242050 15..219 100   Minus
2L 10241014..10241058 867..911 100 -> Minus
2L 10241133..10241780 220..866 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:41:53 Download gff for BS06751.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10241014..10241058 867..911 100 -> Minus
arm_2L 10241133..10241780 220..866 99 -> Minus
arm_2L 10241846..10242050 15..219 100   Minus

BS06751.5prime Sequence

881 bp (802 high quality bases) assembled on 2005-12-04

> BS06751.5prime
GAAGTTATCAGTCGACATGATGACTGAAAAGTTAAATTCTGGGCACACTA
ATTTAACAAGCAAGGGGATTATAAATGATCTTCAAATTGCTGGAAACACA
AGTGACGATATGGGCTGGAAATCAAAGCTGAAGCTGCCGCCAAAGGACAA
CCGATTCAAAACAACTGATGTGACCGATACGCGAGGCAATGAATTCGAGG
AGTTTTGCCTTAAAAGAGAACTGCTTATGGGTATATTCGAGAAGGGATGG
GAGCGCCCTTCGCCAATTCAGGAAGCAGCTATTCCTATAGCATTAAGTGG
AAAAGATGTGCTGGCTCGGGCCAAGAACGGCACAGGCAAGACAGGAGCCT
ACTGCATCCCAGTTTTAGAACAAATCGACCCAACCAAGGACTACATTCAG
GCACTTGTGATGGTCCCCACCCGAGAGTTGGCGCTACAAACCTCACAGAT
ATGTATTGAGCTGGCGAAACATCTTGATATCCGGGTAATGGTCACAACGG
GAGGTACCATTCTAAAGGATGACATTCTTCGTATTTATCAAAAAGTACAA
TTAATTATTGCCACTCCCGGACGAATATTAGATCTGATGGATAAGAAAGT
TGCCGATATGTCGCATTGCAGAATATTAGTTTTGGATGAGGCCGATAAGC
TATTGTCGCTTGATTTTCAAGGCATGCTGGATCATGTTATACTAAAGTTA
CCAAAGGATCCACAGATCTTGCTATTTTCCGCAACATTTCCACTAACAGT
CAAGAATTTCATGGAGAAGCATTTACGCGAGCCTTACGAGATCAACCTGA
TGGAGGAGCTAACACTGAANGGTGTCACTCAGTACTATGCATTCGTACAG
GAGCGCCAGAAAGTACACTGCTTGAATACGC

BS06751.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG4916-PA 1380 me31B-RA 1..865 17..881 4306 99.8 Plus
CG4916-PB 1287 me31B-RB 1..772 110..881 3841 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:38:46
Subject Length Description Subject Range Query Range Score Percent Strand
me31B-RA 1699 CG4916-RA 196..1060 17..881 4314 99.9 Plus
me31B-RB 1600 CG4916-RB 146..961 66..881 4069 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:38:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10240680..10241058 167..545 1895 100 Plus
2L 23513712 2L 10241131..10241468 544..881 1679 99.7 Plus
2L 23513712 2L 10240491..10240592 66..167 510 100 Plus
2L 23513712 2L 10239536..10239586 17..67 255 100 Plus
Blast to na_te.dros performed on 2015-02-12 04:38:44 has no hits.

BS06751.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:51:00 Download gff for BS06751.5prime
Subject Subject Range Query Range Percent Splice Strand
me31B-PA 1..865 17..881 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:27 Download gff for BS06751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4916-PA 1..865 17..881 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:08:06 Download gff for BS06751.5prime
Subject Subject Range Query Range Percent Splice Strand
me31B-RA 196..1060 17..881 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:12:31 Download gff for BS06751.5prime
Subject Subject Range Query Range Percent Splice Strand
me31B-RA 196..1060 17..881 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:12:31 Download gff for BS06751.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10239536..10239585 17..66 100 -> Plus
2L 10240492..10240591 67..166 100 -> Plus
2L 10240680..10241058 167..545 100 -> Plus
2L 10241133..10241468 546..881 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:08:06 Download gff for BS06751.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10239536..10239585 17..66 100 -> Plus
arm_2L 10240492..10240591 67..166 100 -> Plus
arm_2L 10240680..10241058 167..545 100 -> Plus
arm_2L 10241133..10241468 546..881 99   Plus

BS06751.complete Sequence

1412 bp (1412 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635608

> BS06751.complete
GAAGTTATCAGTCGACATGATGACTGAAAAGTTAAATTCTGGGCACACTA
ATTTAACAAGCAAGGGGATTATAAATGATCTTCAAATTGCTGGAAACACA
AGTGACGATATGGGCTGGAAATCAAAGCTGAAGCTGCCGCCAAAGGACAA
CCGATTCAAAACAACTGATGTGACCGATACGCGAGGCAATGAATTCGAGG
AGTTTTGCCTTAAAAGAGAACTGCTTATGGGTATATTCGAGAAGGGATGG
GAGCGCCCTTCGCCAATTCAGGAAGCAGCTATTCCTATAGCATTAAGTGG
AAAAGATGTGCTGGCTCGGGCCAAGAACGGCACAGGCAAGACAGGAGCCT
ACTGCATCCCAGTTTTAGAACAAATCGACCCAACCAAGGACTACATTCAG
GCACTTGTGATGGTCCCCACCCGAGAGTTGGCGCTACAAACCTCACAGAT
ATGTATTGAGCTGGCGAAACATCTTGATATCCGGGTAATGGTCACAACGG
GAGGTACCATTCTAAAGGATGACATTCTTCGTATTTATCAAAAAGTACAA
TTAATTATTGCCACTCCCGGACGAATATTAGATCTGATGGATAAGAAAGT
TGCCGATATGTCGCATTGCAGAATATTAGTTTTGGATGAGGCCGATAAGC
TATTGTCGCTTGATTTTCAAGGCATGCTGGATCATGTTATACTAAAGTTA
CCAAAGGATCCACAGATCTTGCTATTTTCCGCAACATTTCCACTAACAGT
CAAGAATTTCATGGAGAAGCATTTACGCGAGCCTTACGAGATCAACCTGA
TGGAGGAGCTAACACTGAAGGGTGTCACTCAGTACTATGCATTCGTACAG
GAGCGCCAGAAAGTACACTGCTTGAATACGCTCTTTTCGAAGCTGCAGAT
CAATCAGTCTATCATATTCTGCAATTCCACGCAACGTGTCGAGCTATTGG
CCAAAAAGATCACAGAGCTTGGATATTGCTGTTACTATATACACGCTAAG
ATGGCCCAGGCACACAGAAATCGAGTATTCCACGATTTCCGCCAAGGACT
CTGTCGCAATCTGGTGTGCTCCGACCTGTTCACCCGTGGTATCGACGTGC
AGGCCGTGAATGTAGTAATCAATTTCGATTTCCCACGAATGGCAGAGACA
TACTTGCATCGAATTGGTCGCTCAGGACGTTTCGGTCATTTGGGTATTGC
TATTAATCTGATAACCTACGAGGATCGGTTTGATCTGCATCGGATTGAAA
AAGAACTTGGAACCGAAATAAAGCCTATTCCGAAGGTCATAGACCCCGCC
CTTTATGTCGCAAACGTTGGCGCATCCGTTGGCGATACTTGCAACAACAG
TGATCTGAATAATTCTGCGAACGAGGAGGGCAACGTTAGCAAATAAAAGC
TTTCTAGACCAT

BS06751.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
me31B-RA 1380 CG4916-PA 1..1380 17..1396 6900 100 Plus
me31B-RB 1287 CG4916-PB 1..1287 110..1396 6435 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:34:26
Subject Length Description Subject Range Query Range Score Percent Strand
me31B-RA 1699 CG4916-RA 196..1577 17..1398 6910 100 Plus
me31B-RB 1600 CG4916-RB 146..1478 66..1398 6665 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10241131..10241782 544..1195 3260 100 Plus
2L 23513712 2L 10240680..10241058 167..545 1895 100 Plus
2L 23513712 2L 10241845..10242050 1193..1398 1030 100 Plus
2L 23513712 2L 10240491..10240592 66..167 510 100 Plus
2L 23513712 2L 10239536..10239586 17..67 255 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:34:23 has no hits.

BS06751.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:49:13 Download gff for BS06751.complete
Subject Subject Range Query Range Percent Splice Strand
me31B-RA 1..1380 17..1396 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:37:30 Download gff for BS06751.complete
Subject Subject Range Query Range Percent Splice Strand
me31B-RA 211..1592 17..1398 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:30:31 Download gff for BS06751.complete
Subject Subject Range Query Range Percent Splice Strand
me31B-RA 196..1573 17..1394 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:49:13 Download gff for BS06751.complete
Subject Subject Range Query Range Percent Splice Strand
me31B-RA 211..1592 17..1398 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:48:21 Download gff for BS06751.complete
Subject Subject Range Query Range Percent Splice Strand
me31B-RA 196..1573 17..1394 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:48:21 Download gff for BS06751.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10240492..10240591 67..166 100 -> Plus
2L 10239536..10239585 17..66 100 -> Plus
2L 10240680..10241058 167..545 100 -> Plus
2L 10241133..10241780 546..1193 100 -> Plus
2L 10241846..10242046 1194..1394 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:30:31 Download gff for BS06751.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10240492..10240591 67..166 100 -> Plus
arm_2L 10239536..10239585 17..66 100 -> Plus
arm_2L 10240680..10241058 167..545 100 -> Plus
arm_2L 10241133..10241780 546..1193 100 -> Plus
arm_2L 10241846..10242046 1194..1394 100   Plus

BS06751.pep Sequence

Translation from 16 to 1395

> BS06751.pep
MMTEKLNSGHTNLTSKGIINDLQIAGNTSDDMGWKSKLKLPPKDNRFKTT
DVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLA
RAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELA
KHLDIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSH
CRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFME
KHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLV
CSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLIT
YEDRFDLHRIEKELGTEIKPIPKVIDPALYVANVGASVGDTCNNSDLNNS
ANEEGNVSK*

BS06751.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
me31B-PA 459 CG4916-PA 1..459 1..459 2381 100 Plus
me31B-PB 428 CG4916-PB 1..428 32..459 2223 100 Plus
eIF-4a-PF 403 CG9075-PF 30..396 58..422 705 40.1 Plus
eIF-4a-PE 403 CG9075-PE 30..396 58..422 705 40.1 Plus
eIF-4a-PD 403 CG9075-PD 30..396 58..422 705 40.1 Plus