Clone Sequence Records
BS06758.3prime Sequence
858 bp (807 high quality bases) assembled on 2005-12-04
> BS06758.3prime
ATGGTCTAGAAAGCTTTTAGTGGCTGCCGCCGTTGGTGGTGCCATTGGCC
TTGGGCTTCTGCTTGCCGGCGGCAATGAAAGTGGTCACGTCCAGCTTGGT
GGCCAGAGCTTTGAGCTCCACCTTGCCGGCCGGGTTCTTGCCCAGGATGA
GCACGCTGGGGTCCACTTCGAGGACGCGGGCCAACTTGCCCAGAATCTCG
GATTCGTTCAGTCGGATTACTCGTTTGTTGAGCGCCTTGATTGCGGGATC
GGACTGCTGGCGGTTCATGCTCACGATCTGCGTGATCAGCGTCTCCTGAC
CCACGACGCCCAGGACAGAACCATCATCCTGATCCACGACGGGCAGCTGG
TCCACGCGGTGTTTCTTCATCAGGGCAATAGCCTCACCAACAGTTGCATC
CGACTTGAGAATGACCGGGGGAGCGGGTAGCTCCAACTCCGCGATGGCCA
GGCTCCACCACCAGTGACCGTGCTCGTTTACCGGCTCCTTGAAGTTGCGC
GCCTCCATCCAGTTGTCCGACACGAACTTGGTCATGTAGTTGCGTATGCC
ATCGGGCAGAATGACCACGCACCGCTGGCCTTTCTTCAATTTGCGGGCAT
GCTCGAGGGCAGCGTGCATCGCTCCGCCACTGGACCCGCCGCACAACAGA
CCCTCCTCCGCGTTCAGGCGTCTGCTCATGGGGAAACAGTCTGAGTCGCC
GATTTTCGTCCACACATCCACGACGGTGTCATCGAATACGGTGGGCGGAA
AGTCGTAGCCGATGCCCTCCACCTCGTAGAATTGCACATCGGTCTTGTTG
AGCTCAGCAGGGCGGGCAAGGATCGAGCCATAGGGATCCACGCCGACTAT
CTGGNCAC
BS06758.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1753-PA | 1569 | CG1753-RA | 732..1569 | 854..17 | 4190 | 100 | Minus |
CG1753-PB | 1569 | CG1753-RB | 732..1569 | 854..17 | 4190 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 14:46:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-RC | 1788 | CG1753-RC | 823..1661 | 854..16 | 4195 | 100 | Minus |
Cbs-RB | 1990 | CG1753-RB | 1025..1863 | 854..16 | 4195 | 100 | Minus |
Cbs-RA | 1911 | CG1753-RA | 946..1784 | 854..16 | 4195 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 14:46:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21048065..21048598 | 854..321 | 2670 | 100 | Minus |
X | 23542271 | X | 21048664..21048969 | 321..16 | 1530 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 14:46:06 has no hits.
BS06758.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:51:12 Download gff for
BS06758.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-PB | 728..1569 | 17..858 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:44 Download gff for
BS06758.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-PB | 728..1569 | 17..858 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:06:16 Download gff for
BS06758.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 942..1786 | 12..858 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:36:59 Download gff for
BS06758.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 942..1786 | 12..858 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:36:59 Download gff for
BS06758.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21048061..21048598 | 321..858 | 99 | -> | Minus |
X | 21048665..21048971 | 12..320 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:06:16 Download gff for
BS06758.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20919088..20919625 | 321..858 | 99 | -> | Minus |
arm_X | 20919692..20919998 | 12..320 | 99 | | Minus |
BS06758.5prime Sequence
799 bp (797 high quality bases) assembled on 2005-12-04
> BS06758.5prime
GAAGTTATCAGTCGACATGCCACAACCGAAGCCATACGAGAGGCCCGCGG
ACTTCATCGATCCCGGCAAGCCGTCCAAGTGCAAATGGCATCTGGGTACA
GCCGAGAAGTCGCCCCACATCCATCGGGGCATCGCCCACCGCCAGCAGAT
TACGCCCAACATCCTCGAGGTGATCGGATGCACGCCACTGGTCAAGTTGA
ACAACATTCCCGCCAGCGACGGCATCGAATGCGAGATGTATGCCAAGTGC
GAGTTCCTTAATCCGGGTGGATCAGTGAAGGACCGCATTGGGTACCGCAT
GGTGCAGGACGCCGAGGAGCAGGGCCTGCTCAAGCCAGGCTACACCATCA
TCGAACCAACGTCTGGAAACACGGGCATTGGACTGGCAATGGCCTGTGCC
GTTAAGGGATACAAGTGCATTATCGTGATGCCGGAGAAGATGTCCAACGA
GAAGGTGTCCGCGCTGCGAACCCTCGGGGCCAAGATCATACGTACTCCAA
CGGAGGCAGCCTACGATTCGCCGGAGGGACTGATCTACGTTGCTCAGCAG
CTGCAGCGGGAAACGCCCAACTCGATTGTCTTGGATCAGTATCGCAACGC
TGGCAATCCGCTGGCTCACTACGATGGCACTGCCGCCGAGATTCTGTGGC
AGCTGGACAACAAGGTCGATATGATAGTGGTCTCGGCGGGAACGGCGGGA
ACTATCAGTGGTATTGGGCGTAAGATCAAGGAGCAGGTTCCCAGTTGCCA
GATAGTCGGCGTGGATCCCTATGGCTCGATCCTTGCCCGCCCTGCTGAG
BS06758.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1753-PA | 1569 | CG1753-RA | 1..783 | 17..799 | 3915 | 100 | Plus |
CG1753-PB | 1569 | CG1753-RB | 1..783 | 17..799 | 3915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:39:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-RC | 1788 | CG1753-RC | 92..874 | 17..799 | 3915 | 100 | Plus |
Cbs-RB | 1990 | CG1753-RB | 294..1076 | 17..799 | 3915 | 100 | Plus |
Cbs-RA | 1911 | CG1753-RA | 215..997 | 17..799 | 3915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:39:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21047557..21048116 | 240..799 | 2800 | 100 | Plus |
X | 23542271 | X | 21047190..21047412 | 17..239 | 1115 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:39:04 has no hits.
BS06758.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:51:13 Download gff for
BS06758.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-PB | 1..783 | 17..799 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:46 Download gff for
BS06758.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-PB | 1..783 | 17..799 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:31:39 Download gff for
BS06758.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 208..997 | 9..799 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:20:48 Download gff for
BS06758.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 208..997 | 9..799 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:20:48 Download gff for
BS06758.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21047180..21047412 | 8..239 | 98 | -> | Plus |
X | 21047557..21048116 | 240..799 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:31:39 Download gff for
BS06758.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20918207..20918439 | 8..239 | 98 | -> | Plus |
arm_X | 20918584..20919143 | 240..799 | 100 | | Plus |
BS06758.complete Sequence
1601 bp (1601 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635610
> BS06758.complete
GAAGTTATCAGTCGACATGCCACAACCGAAGCCATACGAGAGGCCCGCGG
ACTTCATCGATCCCGGCAAGCCGTCCAAGTGCAAATGGCATCTGGGTACA
GCCGAGAAGTCGCCCCACATCCATCGGGGCATCGCCCACCGCCAGCAGAT
TACGCCCAACATCCTCGAGGTGATCGGATGCACGCCACTGGTCAAGTTGA
ACAACATTCCCGCCAGCGACGGCATCGAATGCGAGATGTATGCCAAGTGC
GAGTTCCTTAATCCGGGTGGATCAGTGAAGGACCGCATTGGGTACCGCAT
GGTGCAGGACGCCGAGGAGCAGGGCCTGCTCAAGCCAGGCTACACCATCA
TCGAACCAACGTCTGGAAACACGGGCATTGGACTGGCAATGGCCTGTGCC
GTTAAGGGATACAAGTGCATTATCGTGATGCCGGAGAAGATGTCCAACGA
GAAGGTGTCCGCGCTGCGAACCCTCGGGGCCAAGATCATACGTACTCCAA
CGGAGGCAGCCTACGATTCGCCGGAGGGACTGATCTACGTTGCTCAGCAG
CTGCAGCGGGAAACGCCCAACTCGATTGTCTTGGATCAGTATCGCAACGC
TGGCAATCCGCTGGCTCACTACGATGGCACTGCCGCCGAGATTCTGTGGC
AGCTGGACAACAAGGTCGATATGATAGTGGTCTCGGCGGGAACGGCGGGA
ACTATCAGTGGTATTGGGCGTAAGATCAAGGAGCAGGTTCCCAGTTGCCA
GATAGTCGGCGTGGATCCCTATGGCTCGATCCTTGCCCGCCCTGCTGAGC
TCAACAAGACCGATGTGCAATTCTACGAGGTGGAGGGCATCGGCTACGAC
TTTCCGCCCACCGTATTCGATGACACCGTCGTGGATGTGTGGACGAAAAT
CGGCGACTCAGACTGTTTCCCCATGAGCAGACGCCTGAACGCGGAGGAGG
GTCTGTTGTGCGGCGGGTCCAGTGGCGGAGCGATGCACGCTGCCCTCGAG
CATGCCCGCAAATTGAAGAAAGGCCAGCGGTGCGTGGTCATTCTGCCCGA
TGGCATACGCAACTACATGACCAAGTTCGTGTCGGACAACTGGATGGAGG
CGCGCAACTTCAAGGAGCCGGTAAACGAGCACGGTCACTGGTGGTGGAGC
CTGGCCATCGCGGAGTTGGAGCTACCCGCTCCCCCGGTCATTCTCAAGTC
GGATGCAACTGTTGGTGAGGCTATTGCCCTGATGAAGAAACACCGCGTGG
ACCAGCTGCCCGTCGTGGATCAGGATGATGGTTCTGTCCTGGGCGTCGTG
GGTCAGGAGACGCTGATCACGCAGATCGTGAGCATGAACCGCCAGCAGTC
CGATCCCGCAATCAAGGCGCTCAACAAACGAGTAATCCGACTGAACGAAT
CCGAGATTCTGGGCAAGTTGGCCCGCGTCCTCGAAGTGGACCCCAGCGTG
CTCATCCTGGGCAAGAACCCGGCCGGCAAGGTGGAGCTCAAAGCTCTGGC
CACCAAGCTGGACGTGACCACTTTCATTGCCGCCGGCAAGCAGAAGCCCA
AGGCCAATGGCACCACCAACGGCGGCAGCCACTAAAAGCTTTCTAGACCA
T
BS06758.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:07:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-RC | 1569 | CG1753-PC | 1..1569 | 17..1585 | 7845 | 100 | Plus |
Cbs-RB | 1569 | CG1753-PB | 1..1569 | 17..1585 | 7845 | 100 | Plus |
Cbs-RA | 1569 | CG1753-PA | 1..1569 | 17..1585 | 7845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:07:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-RC | 1788 | CG1753-RC | 92..1661 | 17..1586 | 7850 | 100 | Plus |
Cbs-RB | 1990 | CG1753-RB | 294..1863 | 17..1586 | 7850 | 100 | Plus |
Cbs-RA | 1911 | CG1753-RA | 215..1784 | 17..1586 | 7850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:07:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21047557..21048598 | 240..1281 | 5210 | 100 | Plus |
X | 23542271 | X | 21048664..21048969 | 1281..1586 | 1530 | 100 | Plus |
X | 23542271 | X | 21047190..21047412 | 17..239 | 1115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:07:52 has no hits.
BS06758.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:11:42 Download gff for
BS06758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-RB | 1..1569 | 17..1585 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:51:30 Download gff for
BS06758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-RB | 285..1865 | 7..1590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:29:08 Download gff for
BS06758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 215..1781 | 17..1583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:11:42 Download gff for
BS06758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1753-RB | 285..1865 | 7..1590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:11:33 Download gff for
BS06758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbs-RA | 215..1781 | 17..1583 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:11:33 Download gff for
BS06758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21047190..21047412 | 17..239 | 100 | -> | Plus |
X | 21047557..21048598 | 240..1281 | 100 | -> | Plus |
X | 21048665..21048966 | 1282..1583 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:29:08 Download gff for
BS06758.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20918217..20918439 | 17..239 | 100 | -> | Plus |
arm_X | 20918584..20919625 | 240..1281 | 100 | -> | Plus |
arm_X | 20919692..20919993 | 1282..1583 | 100 | | Plus |
BS06758.pep Sequence
Translation from 16 to 1584
> BS06758.pep
MPQPKPYERPADFIDPGKPSKCKWHLGTAEKSPHIHRGIAHRQQITPNIL
EVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAE
EQGLLKPGYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSAL
RTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLA
HYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVD
PYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDC
FPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLKKGQRCVVILPDGIRNY
MTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELELPAPPVILKSDATVG
EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIK
ALNKRVIRLNESEILGKLARVLEVDPSVLILGKNPAGKVELKALATKLDV
TTFIAAGKQKPKANGTTNGGSH*
BS06758.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:42:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbs-PC | 522 | CG1753-PC | 1..522 | 1..522 | 2734 | 100 | Plus |
Cbs-PB | 522 | CG1753-PB | 1..522 | 1..522 | 2734 | 100 | Plus |
Cbs-PA | 522 | CG1753-PA | 1..522 | 1..522 | 2734 | 100 | Plus |