Clone BS06764 Report

Search the DGRC for BS06764

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:67
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCycK-RA
Protein status:BS06764.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06764.3prime Sequence

955 bp (785 high quality bases) assembled on 2005-12-04

> BS06764.3prime
ATGGTCTAGAAAGCTTCTAGTAGCGCTGCTGCGATGGACGCCCACCGGCG
TTGTAGTATCCACTGGCTCCTGGAGGCAAGCTAGGCGGCATTGGTGGTGG
TGGTGCAGCGCTCCCGCTATAGTGTCCGACCACTGTCTGCTGGACTCCCC
ATCCGGAAGAGGGGTACGGCGGCATAGGCACTACCGGCGGGGGCGGCGGT
GGAGGAGCATGATAAATGTGGTACCCGGATGGCTGACCTGGTGGTGTTGG
GCCCTGTAACAGGTTCTGGGAGTCGCTAGGACCAATGATTGGCACGCCAC
TGGCTAGGGATTTAATGCTCTGAATGTTGCTAACTTCCAGCACGCCACCG
TTGCCACATACGGGGGGCGGCGGCTGTTGTGGAACGGAAAGTGGTCCAAT
ACCCGTAGAATTGGTAAGCTTGCCGGATTTTGGACTGTCGGCTCTGCTTG
GTGGCTTTTGGGGCGGACTGGTTGGCTGGAGCGCTTCTTTTTGGGTTGAT
TGGTACAGGTCCAGAACTTGGTGGCAGATGTCTTCGAGTATTTCCATCGT
TACATCAGACACAAACATATCCCACCAACGCTGCTGCTGTGGCTGGCGGC
CCTCCCAGTCTTGCACAGTGAATTTGCTTAGCTTGCTGGCCAAATGGATA
AGAGCCACGGCGATAATCTCCGGCTCCCACTGTAGACAAACTACTGTGCT
GAGAGAGTCGTTGACGAAGTTCCACGCCATTTGCACCATCTTTTGCAGCT
TCTGCTGGTCGCCTTTGAAACACTTAGCGTACTTTAGGAGAAAGGTGTAA
GGATGCTCTACTTGCAAATCGAATTTGATGGTCTGCAGCAGAATACGCTC
TAGCGTCATCACCTCCTCCTTAGGGTCGTCGCCAAACGAGTAGAAGTAAT
TGTCGGTAAGGATGCCACGCGCAGTTTTAATAATGTCGCGACACTTCTTT
GGCGT

BS06764.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15218-PA 1203 CycK-RA 265..1203 955..17 4695 100 Minus
CG15218-PB 1203 CycK-RB 265..1203 955..17 4695 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 12:30:12
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-RC 5858 CG15218-RC 684..1622 955..17 4695 100 Minus
CycK-RB 1679 CG15218-RB 484..1422 955..17 4695 100 Minus
CycK-RA 1879 CG15218-RA 684..1622 955..17 4695 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 12:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22128521..22129459 17..955 4695 100 Plus
Blast to na_te.dros performed on 2015-02-06 12:30:07 has no hits.

BS06764.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:51:22 Download gff for BS06764.3prime
Subject Subject Range Query Range Percent Splice Strand
CycK-PA 265..1203 17..955 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:33:59 Download gff for BS06764.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15218-PB 265..1203 17..955 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:44:13 Download gff for BS06764.3prime
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 684..1625 14..955 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:52:23 Download gff for BS06764.3prime
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 684..1625 14..955 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:52:23 Download gff for BS06764.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 22128518..22129459 14..955 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:44:13 Download gff for BS06764.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22128518..22129459 14..955 99   Plus

BS06764.5prime Sequence

972 bp (801 high quality bases) assembled on 2005-12-04

> BS06764.5prime
GAAGTTATCAGTCGACATGCCGTGCTGGTATTACGACAAAAAGGAGCTGC
GGGAGACGCCCTCGATCTTGGATGGAATAAGCTTCGAAACGGAGCGGCGG
TACAGAAAAGAAGGTGCTCGATTTATTATGGAATGTGGCACCAAAATGGG
CTTGGGCCACAACACGATGGCCACCGGCGTTGTATATTTTCACCGATTTT
ACATGTTTCATTCGTTCCGGAGTTTCCCCCGGTACGTGACTGCGTGCTGC
TGCCTGTTCTTTGCTGGCAAGGTGGAGGAGACGCCAAAGAAGTGTCGCGA
CATTATTAAAACTGCGCGTGGCATCCTTACCGACAATTACTTCTACTCGT
TTGGCGACGACCCTAAGGAGGAGGTGATGACGCTAGAGCGTATTCTGCTG
CAGACCATCAAATTCGATTTGCAAGTAGAGCATCCTTACACCTTTCTCCT
AAAGTACGCTAAGTGTTTCAAAGGCGACCAGCAGAAGCTGCAAAAGATGG
TGCAAATGGCGTGGAACTTCGTCAACGACTCTCTCAGCACAGTAGTTTGT
CTACAGTGGGAGCCGGAGATTATCGCCGTGGCTCTTATCCATTTGGCCAG
CAAGCTAAGCAAATTCACTGTGCAAGACTGGGAGGGCCGCCAGCCACAGC
AGCAGCGTTGGTGGGATATGTTTGTGTCTGATGTAACGATGGAAATACTC
GAAGACATCTGCCACCAAGTTCTGGACCTGTACCAATCAACCCAAAAAGA
AGCGCTCCAGCCAACCAGTCCGCCCCAAAAGCCACCAAGCAGAGCCGACA
GTCCAAAATCCGGCAAGCTTACCAATTCTACGGGTATTGGACCACTTTTC
GTTCCCACACAGCCGCCGCCCCCCGTATGTGGCAACGGTGGCGTGCTGGA
AGTTAGCAACATTCAGAGCATTAAATCCCTAGCCAGTGGCGTGCCAATCA
TTGGTCCTAGCGACTCCCAGAA

BS06764.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:32:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG15218-PA 1203 CycK-RA 1..839 17..855 4170 99.8 Plus
CG15218-PB 1203 CycK-RB 1..839 17..855 4170 99.8 Plus
CG15218-PA 1203 CycK-RA 843..956 859..972 570 100 Plus
CG15218-PB 1203 CycK-RB 843..956 859..972 570 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:46:19
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-RC 5858 CG15218-RC 420..1375 17..972 4720 99.7 Plus
CycK-RB 1679 CG15218-RB 220..1175 17..972 4720 99.7 Plus
CycK-RA 1879 CG15218-RA 420..1375 17..972 4720 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:46:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22128768..22129723 972..17 4720 99.6 Minus
2L 23513712 2L 22131022..22131126 263..159 345 88.6 Minus
Blast to na_te.dros performed on 2015-02-12 00:46:16 has no hits.

BS06764.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:51:23 Download gff for BS06764.5prime
Subject Subject Range Query Range Percent Splice Strand
CycK-PA 1..954 17..970 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:34:01 Download gff for BS06764.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15218-PB 1..954 17..970 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 20:03:03 Download gff for BS06764.5prime
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 416..1375 13..972 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:18:11 Download gff for BS06764.5prime
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 416..1375 13..972 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:18:11 Download gff for BS06764.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 22128768..22129725 13..972 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:03:03 Download gff for BS06764.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22128768..22129725 13..972 99   Minus

BS06764.complete Sequence

1235 bp (1235 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635612

> BS06764.complete
GAAGTTATCAGTCGACATGCCGTGCTGGTATTACGACAAAAAGGAGCTGC
GGGAGACGCCCTCGATCTTGGATGGAATAAGCTTCGAAACGGAGCGGCGG
TACAGAAAAGAAGGTGCTCGATTTATTATGGAATGTGGCACCAAAATGGG
CTTGGGCCACAACACGATGGCCACCGGCGTTGTATATTTTCACCGATTTT
ACATGTTTCATTCGTTCCGGAGTTTCCCCCGGTACGTGACTGCGTGCTGC
TGCCTGTTCTTTGCTGGCAAGGTGGAGGAGACGCCAAAGAAGTGTCGCGA
CATTATTAAAACTGCGCGTGGCATCCTTACCGACAATTACTTCTACTCGT
TTGGCGACGACCCTAAGGAGGAGGTGATGACGCTAGAGCGTATTCTGCTG
CAGACCATCAAATTCGATTTGCAAGTAGAGCATCCTTACACCTTTCTCCT
AAAGTACGCTAAGTGTTTCAAAGGCGACCAGCAGAAGCTGCAAAAGATGG
TGCAAATGGCGTGGAACTTCGTCAACGACTCTCTCAGCACAGTAGTTTGT
CTACAGTGGGAGCCGGAGATTATCGCCGTGGCTCTTATCCATTTGGCCAG
CAAGCTAAGCAAATTCACTGTGCAAGACTGGGAGGGCCGCCAGCCACAGC
AGCAGCGTTGGTGGGATATGTTTGTGTCTGATGTAACGATGGAAATACTC
GAAGACATCTGCCACCAAGTTCTGGACCTGTACCAATCAACCCAAAAAGA
AGCGCTCCAGCCAACCAGTCCGCCCCAAAAGCCACCAAGCAGAGCCGACA
GTCCAAAATCCGGCAAGCTTACCAATTCTACGGGTATTGGACCACTTTCC
GTTCCACAACAGCCGCCGCCCCCCGTATGTGGCAACGGTGGCGTGCTGGA
AGTTAGCAACATTCAGAGCATTAAATCCCTAGCCAGTGGCGTGCCAATCA
TTGGTCCTAGCGACTCCCAGAACCTGTTACAGGGCCCAACACCACCAGGT
CAGCCATCCGGGTACCACATTTATCATGCTCCTCCACCGCCGCCCCCGCC
GGTAGTGCCTATGCCGCCGTACCCCTCTTCCGGATGGGGAGTCCAGCAGA
CAGTGGTCGGACACTATAGCGGGAGCGCTGCACCACCACCACCAATGCCG
CCTAGCTTGCCTCCAGGAGCCAGTGGATACTACAACGCCGGTGGGCGTCC
ATCGCAGCAGCGCTACTAGAAGCTTTCTAGACCAT

BS06764.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-RC 1203 CG15218-PC 1..1203 17..1219 6015 100 Plus
CycK-RB 1203 CG15218-PB 1..1203 17..1219 6015 100 Plus
CycK-RA 1203 CG15218-PA 1..1203 17..1219 6015 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:58:50
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-RC 5858 CG15218-RC 420..1622 17..1219 6015 100 Plus
CycK-RB 1679 CG15218-RB 220..1422 17..1219 6015 100 Plus
CycK-RA 1879 CG15218-RA 420..1622 17..1219 6015 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22128521..22129723 1219..17 6015 100 Minus
2L 23513712 2L 22131022..22131126 263..159 345 88.6 Minus
Blast to na_te.dros performed on 2014-11-27 06:58:49 has no hits.

BS06764.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:11:43 Download gff for BS06764.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RB 1..1203 17..1219 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:51:32 Download gff for BS06764.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RB 189..1398 13..1222 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:11 Download gff for BS06764.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 420..1622 17..1219 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:11:43 Download gff for BS06764.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RB 189..1398 13..1222 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:59:43 Download gff for BS06764.complete
Subject Subject Range Query Range Percent Splice Strand
CycK-RA 420..1622 17..1219 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:59:43 Download gff for BS06764.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22128521..22129723 17..1219 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:11 Download gff for BS06764.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22128521..22129723 17..1219 100   Minus

BS06764.pep Sequence

Translation from 16 to 1218

> BS06764.pep
MPCWYYDKKELRETPSILDGISFETERRYRKEGARFIMECGTKMGLGHNT
MATGVVYFHRFYMFHSFRSFPRYVTACCCLFFAGKVEETPKKCRDIIKTA
RGILTDNYFYSFGDDPKEEVMTLERILLQTIKFDLQVEHPYTFLLKYAKC
FKGDQQKLQKMVQMAWNFVNDSLSTVVCLQWEPEIIAVALIHLASKLSKF
TVQDWEGRQPQQQRWWDMFVSDVTMEILEDICHQVLDLYQSTQKEALQPT
SPPQKPPSRADSPKSGKLTNSTGIGPLSVPQQPPPPVCGNGGVLEVSNIQ
SIKSLASGVPIIGPSDSQNLLQGPTPPGQPSGYHIYHAPPPPPPPVVPMP
PYPSSGWGVQQTVVGHYSGSAAPPPPMPPSLPPGASGYYNAGGRPSQQRY
*

BS06764.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:42:08
Subject Length Description Subject Range Query Range Score Percent Strand
CycK-PC 400 CG15218-PC 1..400 1..400 2188 100 Plus
CycK-PB 400 CG15218-PB 1..400 1..400 2188 100 Plus
CycK-PA 400 CG15218-PA 1..400 1..400 2188 100 Plus
CycT-PC 1097 CG6292-PC 45..275 4..242 323 31.2 Plus
CycT-PB 1097 CG6292-PB 45..275 4..242 323 31.2 Plus