Clone Sequence Records
BS06807.3prime Sequence
959 bp (806 high quality bases) assembled on 2005-12-04
> BS06807.3prime
ATGGTCTAGAAAGCTTTCAGCACGCCAGTTGTCCGCAGATTGCGCCCGTT
TCGCTAGCCGACCAAGCGATTCTGGGCCGTGGGGCTGGCGAGGATGGCGT
CGAAGGCTCAGAGTCACCAATGAAAACGGCCGAATCATCAGCACTGGACG
GGGACAGCGGTCTGTCGCTGTTTGCTCCGATTTCCGAAATGGGTATGGAG
AGAGAGGTTGTCGCCTCCTCGCTGAGCGGAACAATTTCCTTGAAACTCTG
ATTCGGTGGCATTACCACCAGCATGTTTATTGAAATGAGAAGTGGATGCA
CCAACTTTGGGTCTAACACCATGAGTGGCACCTCCTCGTTCTTTTCGAGG
CTAAGAGAACAGATCTCGGACGTTTGGGTGAAGACTGCCTGGCGCTGGGC
GTTTATCGAGGTCACCGTGGTGCGGACCATGAACTTGCGTTTCGTCTGCA
GGCTAAGCACTCGCTCGTGCTCGTGCCGGTGGTGCCGACGAATGTTCAGT
CTACGCGAGTCCATGATCAGGATGAGATCCATGCCAAAGTTGAAGCCCGT
CCAGCGCCACTTCTGGTAGCCAGGCTCAAGCAACATACGTCCGCATCGCA
TGCAGTTCTCAAAGAACTGCTCATCGTCCAGCTGCTGAGGACTACAATCC
TCCTGCCCATGATCGATACGTAGTAATGCATCCCAGTGGTTGTGAATGTG
CCGATACAGCCACTCCTTGGGTATAATATTGTCATTGTATATGATTTTTA
GATCCATGTAGTGGTTGGTCAGGTACTGGGTTCGTAGCTTCTGAAAGACC
TTCACATAAGGCTGCCCCTCGGGCGTGGCCAAGAACGAGCGTTCCTCCGA
GCGGCTGGTAAAGTATGTCCACTGGACGACATCACCACTAGGCGCATGCG
TTTCCACGCCGGCATTAACCAAAAGCTCCTGCGTCTTTAGCGCCTCCGCC
CGCTGGACG
BS06807.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:33:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8411-PA | 1710 | gcl-RA | 769..1710 | 958..17 | 4710 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 12:48:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gcl-RA | 2464 | CG8411-RA | 999..1940 | 958..17 | 4710 | 100 | Minus |
gcl-RB | 2506 | CG8411-RB | 1044..1982 | 958..17 | 4655 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 12:48:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8727847..8728475 | 645..17 | 3145 | 100 | Minus |
2R | 25286936 | 2R | 8727464..8727777 | 958..645 | 1570 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 12:48:19 has no hits.
BS06807.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:52:34 Download gff for
BS06807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-PA | 767..1710 | 17..959 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:35:39 Download gff for
BS06807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8411-PA | 767..1710 | 17..959 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:54:02 Download gff for
BS06807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-RA | 997..1942 | 13..959 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:44:40 Download gff for
BS06807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-RA | 997..1942 | 13..959 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:44:40 Download gff for
BS06807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8727462..8727777 | 645..959 | 99 | -> | Minus |
2R | 8727848..8728475 | 17..644 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:54:02 Download gff for
BS06807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4614967..4615282 | 645..959 | 99 | -> | Minus |
arm_2R | 4615353..4615980 | 17..644 | 100 | -> | Minus |
BS06807.5prime Sequence
964 bp (807 high quality bases) assembled on 2005-12-04
> BS06807.5prime
GAAGTTATCAGTCGACATGGGTCAAATAGTGGGATCCATGCATATGAACG
TCGCTGAGGTGTTCAGCAATCGACGGAAGCGGAAGCGCAGCACTGATTCA
TCTTTGGGGAAGGATGATCCGGCCCAGTTAGACACCACTCAGCCCAAAAA
AAAAAAACTTCTTACTACCACCCAGTACATATACAAGGCGCTCTTCAAGG
AGGAAAAGAACTCGGATGTGGCTGTCATGGCTCTGGATAAGGTCTGGCAC
CTGCATAAGGTGTACCTGAGCCAGAGTCCATACTTCTATACTATGTTCAA
TGGGACGTGGCGGGAAGCCCAGCAGAATTTCATTCAGATCACAATCCTGG
ACGACCGGATCACCGTTGCTAGCCTGGATGCTGTCTTTGGTTCCATGTAT
TCCGATGAGATCGAAATCGAGTCAGCAGATGTTATCTCGGTATTGGCCAC
AGCCACGTTGTTCCACTTAGACGGAATCATCGACAAGTGTGCCGAGGTGA
TGGTGGATAACATTAGTCCGGAGACAGCTATCCAGTATTACGAGGCCGCC
TGCCAGTACGGTGTGGTCGGAGTCAAGAAGTCCACCTTTCAGTGGTTCCA
GATCAATCTGCTAAGCATTTATAGTAAGCAACCGAACCTGCTTAGGCACA
TCTCCATTGAGCTGATGAGTGCCCTGACCGCCAGTCCCGATTTGTATGTG
ATGCAGACGGAGTTCTCGCTGTACACTCTACTGCGCACATGGATGTTCCT
ACGACTGCATCCCGACTACGATCCAGAGGACCCGGTCCAGCGGGCGGAGG
CGCTAAAGACGCAGGAGCTTTTGGTTAATGCCGGCGTGGAAACGCATGCG
CCTAGTGGTGATGTCGTCCAGTGGACATACTTTACCAGCCGCTCGGAGGA
ACGCTCGTTCTTGGGCACGCCCGAGGGGCAGCCTTATGTGAAGGTCTTTC
AGAAGCTACGAACC
BS06807.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:33:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8411-PA | 1710 | gcl-RA | 1..948 | 17..964 | 4715 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:32:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gcl-RB | 2506 | CG8411-RB | 275..1223 | 16..964 | 4730 | 99.9 | Plus |
gcl-RA | 2464 | CG8411-RA | 230..1178 | 16..964 | 4730 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:32:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8726830..8727643 | 151..964 | 4055 | 99.9 | Plus |
2R | 25286936 | 2R | 8726637..8726771 | 16..150 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 14:32:16 has no hits.
BS06807.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:52:35 Download gff for
BS06807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-PA | 1..948 | 17..964 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:35:40 Download gff for
BS06807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8411-PA | 1..948 | 17..964 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:40:38 Download gff for
BS06807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-RA | 225..1178 | 8..964 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:01:14 Download gff for
BS06807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-RA | 225..1178 | 8..964 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:01:14 Download gff for
BS06807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8726632..8726771 | 8..150 | 97 | -> | Plus |
2R | 8726830..8727643 | 151..964 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:40:38 Download gff for
BS06807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4614137..4614276 | 8..150 | 97 | -> | Plus |
arm_2R | 4614335..4615148 | 151..964 | 99 | | Plus |
BS06807.complete Sequence
1742 bp assembled on 2007-10-17
GenBank Submission: FJ635624
> BS06807.complete
GAAGTTATCAGTCGACATGGGTCAAATAGTGGGATCCATGCATATGAACG
TCGCTGAGGTGTTCAGCAATCGACGGAAGCGGAAGCGCAGCACTGATTCA
TCTTTGGGGAAGGATGATCCGGCCCAGTTAGACACCACTCAGCCCAAAAA
AAAAAAACTTCTTACTACCACCCAGTACATATACAAGGCGCTCTTCAAGG
AGGAAAAGAACTCGGATGTGGCTGTCATGGCTCTGGATAAGGTCTGGCAC
CTGCATAAGGTGTACCTGAGCCAGAGTCCATACTTCTATACTATGTTCAA
TGGGACGTGGCGGGAAGCCCAGCAGAATTTCATTCAGATCACAATCCTGG
ACGACCGGATCACCGTTGCTAGCCTGGATGCTGTCTTTGGTTCCATGTAT
TCCGATGAGATCGAAATCGAGTCAGCAGATGTTATCTCGGTATTGGCCAC
AGCCACGTTGTTCCACTTAGACGGAATCATCGACAAGTGTGCCGAGGTGA
TGGTGGATAACATTAGTCCGGAGACAGCTATCCAGTATTACGAGGCCGCC
TGCCAGTACGGTGTGGTCGGAGTCAAGAAGTCCACCTTTCAGTGGTTCCA
GATCAATCTGCTAAGCATTTATAGTAAGCAACCGAACCTGCTTAGGCACA
TCTCCATTGAGCTGATGAGTGCCCTGACCGCCAGTCCCGATTTGTATGTG
ATGCAGACGGAGTTCTCGCTGTACACTCTACTGCGCACATGGATGTTCCT
ACGACTGCATCCCGACTACGATCCAGAGGACCCGGTCCAGCGGGCGGAGG
CGCTAAAGACGCAGGAGCTTTTGGTTAATGCCGGCGTGGAAACGCATGCG
CCTAGTGGTGATGTCGTCCAGTGGACATACTTTACCAGCCGCTCGGAGGA
ACGCTCGTTCTTGGCCACGCCCGAGGGGCAGCCTTATGTGAAGGTCTTTC
AGAAGCTACGAACCCAGTACCTGACCAACCACTACATGGATCTAAAAATC
ATATACAATGACAATATTATACCCAAGGAGTGGCTGTATCGGCACATTCA
CAACCACTGGGATGCATTACTACGTATCGATCATGGGCAGGAGGATTGTA
GTCCTCAGCAGCTGGACGATGAGCAGTTCTTTGAGAACTGCATGCGATGC
GGACGTATGTTGCTTGAGCCTGGCTACCAGAAGTGGCGCTGGACGGGCTT
CAACTTTGGCATGGATCTCATCCTGATCATGGACTCGCGTAGACTGAACA
TTCGTCGGCACCACCGGCACGAGCACGAGCGAGTGCTTAGCCTGCAGACG
AAACGCAAGTTCATGGTCCGCACCACGGTGACCTCGATAAACGCCCAGCG
CCAGGCAGTCTTCACCCAAACGTCCGAGATCTGTTCTCTTAGCCTCGAAA
AGAACGAGGAGGTGCCACTCATGGTGTTAGACCCAAAGTTGGTGCATCCA
CTTCTCATTTCAATAAACATGCTGGTGGTAATGCCACCGAATCAGAGTTT
CAAGGAAATTGTTCCGCTCAGCGAGGAGGCGACAACCTCTCTCTCCATAC
CCATTTCGGAAATCGGAGCAAACAGCGACAGACCGCTGTCCCCGTCCAGT
GCTGATGATTCGGCCGTTTTCATTGGTGACTCTGAGCCTTCGACGCCATC
CTCGCCAGCCCCACGGCCCAGAATCGCTTGGTCGGCTAGCGAAACGGGCG
CAATCTGCGGACAACTGGCGTGCTGAAAGCTTTCTAGACCAT
BS06807.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:26:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gcl-RA | 1710 | CG8411-PA | 1..1710 | 17..1726 | 8550 | 100 | Plus |
gcl-RB | 1707 | CG8411-PB | 1..1707 | 17..1726 | 8470 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:26:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gcl-RA | 2464 | CG8411-RA | 230..1940 | 16..1726 | 8555 | 100 | Plus |
gcl-RB | 2506 | CG8411-RB | 275..1982 | 16..1726 | 8475 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:26:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8726830..8727777 | 151..1098 | 4740 | 100 | Plus |
2R | 25286936 | 2R | 8727847..8728475 | 1098..1726 | 3145 | 100 | Plus |
2R | 25286936 | 2R | 8726637..8726771 | 16..150 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:26:19 has no hits.
BS06807.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:06:15 Download gff for
BS06807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-RA | 1..1710 | 17..1726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:35:27 Download gff for
BS06807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-RA | 223..1940 | 8..1730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:10:00 Download gff for
BS06807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-RA | 231..1939 | 17..1725 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:31:56 Download gff for
BS06807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-RA | 229..1937 | 17..1725 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:26 Download gff for
BS06807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gcl-RA | 231..1939 | 17..1725 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:26 Download gff for
BS06807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8726638..8726771 | 17..150 | 100 | -> | Plus |
2R | 8726830..8727777 | 151..1098 | 100 | -> | Plus |
2R | 8727848..8728474 | 1099..1725 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:10:00 Download gff for
BS06807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4614143..4614276 | 17..150 | 100 | -> | Plus |
arm_2R | 4614335..4615282 | 151..1098 | 100 | -> | Plus |
arm_2R | 4615353..4615979 | 1099..1725 | 100 | | Plus |
BS06807.pep Sequence
Translation from 16 to 1725
> BS06807.pep
MGQIVGSMHMNVAEVFSNRRKRKRSTDSSLGKDDPAQLDTTQPKKKKLLT
TTQYIYKALFKEEKNSDVAVMALDKVWHLHKVYLSQSPYFYTMFNGTWRE
AQQNFIQITILDDRITVASLDAVFGSMYSDEIEIESADVISVLATATLFH
LDGIIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLS
IYSKQPNLLRHISIELMSALTASPDLYVMQTEFSLYTLLRTWMFLRLHPD
YDPEDPVQRAEALKTQELLVNAGVETHAPSGDVVQWTYFTSRSEERSFLA
TPEGQPYVKVFQKLRTQYLTNHYMDLKIIYNDNIIPKEWLYRHIHNHWDA
LLRIDHGQEDCSPQQLDDEQFFENCMRCGRMLLEPGYQKWRWTGFNFGMD
LILIMDSRRLNIRRHHRHEHERVLSLQTKRKFMVRTTVTSINAQRQAVFT
QTSEICSLSLEKNEEVPLMVLDPKLVHPLLISINMLVVMPPNQSFKEIVP
LSEEATTSLSIPISEIGANSDRPLSPSSADDSAVFIGDSEPSTPSSPAPR
PRIAWSASETGAICGQLAC*
BS06807.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:37:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gcl-PA | 569 | CG8411-PA | 1..569 | 1..569 | 2972 | 100 | Plus |
gcl-PB | 568 | CG8411-PB | 1..568 | 1..569 | 2956 | 99.8 | Plus |
Keap1-PC | 744 | CG3962-PC | 58..229 | 66..243 | 159 | 25.7 | Plus |
Keap1-PA | 744 | CG3962-PA | 58..229 | 66..243 | 159 | 25.7 | Plus |
Keap1-PB | 776 | CG3962-PB | 90..261 | 66..243 | 159 | 25.7 | Plus |