Clone BS06807 Report

Search the DGRC for BS06807

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:68
Well:7
Vector:pDNR-Dual
Associated Gene/Transcriptgcl-RA
Protein status:BS06807.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06807.3prime Sequence

959 bp (806 high quality bases) assembled on 2005-12-04

> BS06807.3prime
ATGGTCTAGAAAGCTTTCAGCACGCCAGTTGTCCGCAGATTGCGCCCGTT
TCGCTAGCCGACCAAGCGATTCTGGGCCGTGGGGCTGGCGAGGATGGCGT
CGAAGGCTCAGAGTCACCAATGAAAACGGCCGAATCATCAGCACTGGACG
GGGACAGCGGTCTGTCGCTGTTTGCTCCGATTTCCGAAATGGGTATGGAG
AGAGAGGTTGTCGCCTCCTCGCTGAGCGGAACAATTTCCTTGAAACTCTG
ATTCGGTGGCATTACCACCAGCATGTTTATTGAAATGAGAAGTGGATGCA
CCAACTTTGGGTCTAACACCATGAGTGGCACCTCCTCGTTCTTTTCGAGG
CTAAGAGAACAGATCTCGGACGTTTGGGTGAAGACTGCCTGGCGCTGGGC
GTTTATCGAGGTCACCGTGGTGCGGACCATGAACTTGCGTTTCGTCTGCA
GGCTAAGCACTCGCTCGTGCTCGTGCCGGTGGTGCCGACGAATGTTCAGT
CTACGCGAGTCCATGATCAGGATGAGATCCATGCCAAAGTTGAAGCCCGT
CCAGCGCCACTTCTGGTAGCCAGGCTCAAGCAACATACGTCCGCATCGCA
TGCAGTTCTCAAAGAACTGCTCATCGTCCAGCTGCTGAGGACTACAATCC
TCCTGCCCATGATCGATACGTAGTAATGCATCCCAGTGGTTGTGAATGTG
CCGATACAGCCACTCCTTGGGTATAATATTGTCATTGTATATGATTTTTA
GATCCATGTAGTGGTTGGTCAGGTACTGGGTTCGTAGCTTCTGAAAGACC
TTCACATAAGGCTGCCCCTCGGGCGTGGCCAAGAACGAGCGTTCCTCCGA
GCGGCTGGTAAAGTATGTCCACTGGACGACATCACCACTAGGCGCATGCG
TTTCCACGCCGGCATTAACCAAAAGCTCCTGCGTCTTTAGCGCCTCCGCC
CGCTGGACG

BS06807.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG8411-PA 1710 gcl-RA 769..1710 958..17 4710 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 12:48:23
Subject Length Description Subject Range Query Range Score Percent Strand
gcl-RA 2464 CG8411-RA 999..1940 958..17 4710 100 Minus
gcl-RB 2506 CG8411-RB 1044..1982 958..17 4655 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 12:48:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8727847..8728475 645..17 3145 100 Minus
2R 25286936 2R 8727464..8727777 958..645 1570 100 Minus
Blast to na_te.dros performed on 2015-02-03 12:48:19 has no hits.

BS06807.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:52:34 Download gff for BS06807.3prime
Subject Subject Range Query Range Percent Splice Strand
gcl-PA 767..1710 17..959 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:35:39 Download gff for BS06807.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8411-PA 767..1710 17..959 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:54:02 Download gff for BS06807.3prime
Subject Subject Range Query Range Percent Splice Strand
gcl-RA 997..1942 13..959 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:44:40 Download gff for BS06807.3prime
Subject Subject Range Query Range Percent Splice Strand
gcl-RA 997..1942 13..959 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:44:40 Download gff for BS06807.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8727462..8727777 645..959 99 -> Minus
2R 8727848..8728475 17..644 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:54:02 Download gff for BS06807.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4614967..4615282 645..959 99 -> Minus
arm_2R 4615353..4615980 17..644 100 -> Minus

BS06807.5prime Sequence

964 bp (807 high quality bases) assembled on 2005-12-04

> BS06807.5prime
GAAGTTATCAGTCGACATGGGTCAAATAGTGGGATCCATGCATATGAACG
TCGCTGAGGTGTTCAGCAATCGACGGAAGCGGAAGCGCAGCACTGATTCA
TCTTTGGGGAAGGATGATCCGGCCCAGTTAGACACCACTCAGCCCAAAAA
AAAAAAACTTCTTACTACCACCCAGTACATATACAAGGCGCTCTTCAAGG
AGGAAAAGAACTCGGATGTGGCTGTCATGGCTCTGGATAAGGTCTGGCAC
CTGCATAAGGTGTACCTGAGCCAGAGTCCATACTTCTATACTATGTTCAA
TGGGACGTGGCGGGAAGCCCAGCAGAATTTCATTCAGATCACAATCCTGG
ACGACCGGATCACCGTTGCTAGCCTGGATGCTGTCTTTGGTTCCATGTAT
TCCGATGAGATCGAAATCGAGTCAGCAGATGTTATCTCGGTATTGGCCAC
AGCCACGTTGTTCCACTTAGACGGAATCATCGACAAGTGTGCCGAGGTGA
TGGTGGATAACATTAGTCCGGAGACAGCTATCCAGTATTACGAGGCCGCC
TGCCAGTACGGTGTGGTCGGAGTCAAGAAGTCCACCTTTCAGTGGTTCCA
GATCAATCTGCTAAGCATTTATAGTAAGCAACCGAACCTGCTTAGGCACA
TCTCCATTGAGCTGATGAGTGCCCTGACCGCCAGTCCCGATTTGTATGTG
ATGCAGACGGAGTTCTCGCTGTACACTCTACTGCGCACATGGATGTTCCT
ACGACTGCATCCCGACTACGATCCAGAGGACCCGGTCCAGCGGGCGGAGG
CGCTAAAGACGCAGGAGCTTTTGGTTAATGCCGGCGTGGAAACGCATGCG
CCTAGTGGTGATGTCGTCCAGTGGACATACTTTACCAGCCGCTCGGAGGA
ACGCTCGTTCTTGGGCACGCCCGAGGGGCAGCCTTATGTGAAGGTCTTTC
AGAAGCTACGAACC

BS06807.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG8411-PA 1710 gcl-RA 1..948 17..964 4715 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
gcl-RB 2506 CG8411-RB 275..1223 16..964 4730 99.9 Plus
gcl-RA 2464 CG8411-RA 230..1178 16..964 4730 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8726830..8727643 151..964 4055 99.9 Plus
2R 25286936 2R 8726637..8726771 16..150 675 100 Plus
Blast to na_te.dros performed on 2015-02-11 14:32:16 has no hits.

BS06807.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:52:35 Download gff for BS06807.5prime
Subject Subject Range Query Range Percent Splice Strand
gcl-PA 1..948 17..964 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:35:40 Download gff for BS06807.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8411-PA 1..948 17..964 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:40:38 Download gff for BS06807.5prime
Subject Subject Range Query Range Percent Splice Strand
gcl-RA 225..1178 8..964 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:01:14 Download gff for BS06807.5prime
Subject Subject Range Query Range Percent Splice Strand
gcl-RA 225..1178 8..964 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:01:14 Download gff for BS06807.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8726632..8726771 8..150 97 -> Plus
2R 8726830..8727643 151..964 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:40:38 Download gff for BS06807.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4614137..4614276 8..150 97 -> Plus
arm_2R 4614335..4615148 151..964 99   Plus

BS06807.complete Sequence

1742 bp assembled on 2007-10-17

GenBank Submission: FJ635624

> BS06807.complete
GAAGTTATCAGTCGACATGGGTCAAATAGTGGGATCCATGCATATGAACG
TCGCTGAGGTGTTCAGCAATCGACGGAAGCGGAAGCGCAGCACTGATTCA
TCTTTGGGGAAGGATGATCCGGCCCAGTTAGACACCACTCAGCCCAAAAA
AAAAAAACTTCTTACTACCACCCAGTACATATACAAGGCGCTCTTCAAGG
AGGAAAAGAACTCGGATGTGGCTGTCATGGCTCTGGATAAGGTCTGGCAC
CTGCATAAGGTGTACCTGAGCCAGAGTCCATACTTCTATACTATGTTCAA
TGGGACGTGGCGGGAAGCCCAGCAGAATTTCATTCAGATCACAATCCTGG
ACGACCGGATCACCGTTGCTAGCCTGGATGCTGTCTTTGGTTCCATGTAT
TCCGATGAGATCGAAATCGAGTCAGCAGATGTTATCTCGGTATTGGCCAC
AGCCACGTTGTTCCACTTAGACGGAATCATCGACAAGTGTGCCGAGGTGA
TGGTGGATAACATTAGTCCGGAGACAGCTATCCAGTATTACGAGGCCGCC
TGCCAGTACGGTGTGGTCGGAGTCAAGAAGTCCACCTTTCAGTGGTTCCA
GATCAATCTGCTAAGCATTTATAGTAAGCAACCGAACCTGCTTAGGCACA
TCTCCATTGAGCTGATGAGTGCCCTGACCGCCAGTCCCGATTTGTATGTG
ATGCAGACGGAGTTCTCGCTGTACACTCTACTGCGCACATGGATGTTCCT
ACGACTGCATCCCGACTACGATCCAGAGGACCCGGTCCAGCGGGCGGAGG
CGCTAAAGACGCAGGAGCTTTTGGTTAATGCCGGCGTGGAAACGCATGCG
CCTAGTGGTGATGTCGTCCAGTGGACATACTTTACCAGCCGCTCGGAGGA
ACGCTCGTTCTTGGCCACGCCCGAGGGGCAGCCTTATGTGAAGGTCTTTC
AGAAGCTACGAACCCAGTACCTGACCAACCACTACATGGATCTAAAAATC
ATATACAATGACAATATTATACCCAAGGAGTGGCTGTATCGGCACATTCA
CAACCACTGGGATGCATTACTACGTATCGATCATGGGCAGGAGGATTGTA
GTCCTCAGCAGCTGGACGATGAGCAGTTCTTTGAGAACTGCATGCGATGC
GGACGTATGTTGCTTGAGCCTGGCTACCAGAAGTGGCGCTGGACGGGCTT
CAACTTTGGCATGGATCTCATCCTGATCATGGACTCGCGTAGACTGAACA
TTCGTCGGCACCACCGGCACGAGCACGAGCGAGTGCTTAGCCTGCAGACG
AAACGCAAGTTCATGGTCCGCACCACGGTGACCTCGATAAACGCCCAGCG
CCAGGCAGTCTTCACCCAAACGTCCGAGATCTGTTCTCTTAGCCTCGAAA
AGAACGAGGAGGTGCCACTCATGGTGTTAGACCCAAAGTTGGTGCATCCA
CTTCTCATTTCAATAAACATGCTGGTGGTAATGCCACCGAATCAGAGTTT
CAAGGAAATTGTTCCGCTCAGCGAGGAGGCGACAACCTCTCTCTCCATAC
CCATTTCGGAAATCGGAGCAAACAGCGACAGACCGCTGTCCCCGTCCAGT
GCTGATGATTCGGCCGTTTTCATTGGTGACTCTGAGCCTTCGACGCCATC
CTCGCCAGCCCCACGGCCCAGAATCGCTTGGTCGGCTAGCGAAACGGGCG
CAATCTGCGGACAACTGGCGTGCTGAAAGCTTTCTAGACCAT

BS06807.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
gcl-RA 1710 CG8411-PA 1..1710 17..1726 8550 100 Plus
gcl-RB 1707 CG8411-PB 1..1707 17..1726 8470 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
gcl-RA 2464 CG8411-RA 230..1940 16..1726 8555 100 Plus
gcl-RB 2506 CG8411-RB 275..1982 16..1726 8475 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8726830..8727777 151..1098 4740 100 Plus
2R 25286936 2R 8727847..8728475 1098..1726 3145 100 Plus
2R 25286936 2R 8726637..8726771 16..150 675 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:26:19 has no hits.

BS06807.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:06:15 Download gff for BS06807.complete
Subject Subject Range Query Range Percent Splice Strand
gcl-RA 1..1710 17..1726 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:35:27 Download gff for BS06807.complete
Subject Subject Range Query Range Percent Splice Strand
gcl-RA 223..1940 8..1730 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:10:00 Download gff for BS06807.complete
Subject Subject Range Query Range Percent Splice Strand
gcl-RA 231..1939 17..1725 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:31:56 Download gff for BS06807.complete
Subject Subject Range Query Range Percent Splice Strand
gcl-RA 229..1937 17..1725 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:26 Download gff for BS06807.complete
Subject Subject Range Query Range Percent Splice Strand
gcl-RA 231..1939 17..1725 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:26 Download gff for BS06807.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8726638..8726771 17..150 100 -> Plus
2R 8726830..8727777 151..1098 100 -> Plus
2R 8727848..8728474 1099..1725 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:10:00 Download gff for BS06807.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4614143..4614276 17..150 100 -> Plus
arm_2R 4614335..4615282 151..1098 100 -> Plus
arm_2R 4615353..4615979 1099..1725 100   Plus

BS06807.pep Sequence

Translation from 16 to 1725

> BS06807.pep
MGQIVGSMHMNVAEVFSNRRKRKRSTDSSLGKDDPAQLDTTQPKKKKLLT
TTQYIYKALFKEEKNSDVAVMALDKVWHLHKVYLSQSPYFYTMFNGTWRE
AQQNFIQITILDDRITVASLDAVFGSMYSDEIEIESADVISVLATATLFH
LDGIIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLS
IYSKQPNLLRHISIELMSALTASPDLYVMQTEFSLYTLLRTWMFLRLHPD
YDPEDPVQRAEALKTQELLVNAGVETHAPSGDVVQWTYFTSRSEERSFLA
TPEGQPYVKVFQKLRTQYLTNHYMDLKIIYNDNIIPKEWLYRHIHNHWDA
LLRIDHGQEDCSPQQLDDEQFFENCMRCGRMLLEPGYQKWRWTGFNFGMD
LILIMDSRRLNIRRHHRHEHERVLSLQTKRKFMVRTTVTSINAQRQAVFT
QTSEICSLSLEKNEEVPLMVLDPKLVHPLLISINMLVVMPPNQSFKEIVP
LSEEATTSLSIPISEIGANSDRPLSPSSADDSAVFIGDSEPSTPSSPAPR
PRIAWSASETGAICGQLAC*

BS06807.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:37:20
Subject Length Description Subject Range Query Range Score Percent Strand
gcl-PA 569 CG8411-PA 1..569 1..569 2972 100 Plus
gcl-PB 568 CG8411-PB 1..568 1..569 2956 99.8 Plus
Keap1-PC 744 CG3962-PC 58..229 66..243 159 25.7 Plus
Keap1-PA 744 CG3962-PA 58..229 66..243 159 25.7 Plus
Keap1-PB 776 CG3962-PB 90..261 66..243 159 25.7 Plus