Clone BS06846 Report

Search the DGRC for BS06846

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:68
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG15141-RA
Protein status:BS06846.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06846.3prime Sequence

969 bp (805 high quality bases) assembled on 2005-12-04

> BS06846.3prime
ATGGTCTAGAAAGCTTTTAGCGACAGAAATAGGGCTGACCCAGGTTGGCA
TTGTTCTCATTGCGCATGCCGGCAAAGAACCGATTGATATCCTCCTCGGT
CACTACCTTCTTGCTGGCGGCGAATGCCTGCAGGTATTCCTTTAGCTTGT
CCTTCATGCGATTGTATTCGGTAATCGCATCGATTTGCTGTGTCCGGTCA
ATGGAGGCCAGTGCCCGGATTCCTTGCTCATAACTGGAATTCTCTTCAGC
CCGCTTCATGCCGCGCTCCTCGTACGTCTTAGCCGAATCCTCGACATCCA
GCAGAAACTCCACGGCAAGTTCCTTGTAAAGCGACAGGCATTCGGAGCAC
TGACAGAGTGATTTTCGCCAGTCATTTGTCCAGAAAGCAGCTCCCTGATG
CTCCTTGGTTGGTTTGGGCCGACGACAATCGTCCAGTTTGGCGCGCTTCT
GGCTGGGTTCGCCTTCGTCTGGCTGAGATTCACCTTCAGGAACTTTCATG
ATATCGCAGATGCTGCGGTCCAACTCGTTCTTCAGCTGGCTATCGTCAGC
CTCCGGCTTGTCCTCCTTCGCATCTTCTAGCACAGGCTGCAGGGCTAATC
CAGTGTAGTCCTTTAGGAAGGGTTTGGCATCCATGCAGCCATCGCAAATC
ATTTCGCTGCAGACATCCAGCCACTTGTCGCTGGCGCCGGGCGCTTTCAT
GTGCGGCAAGTGGAACCAGTCCTCGCAGATGGCGCACTGCAGCATAACCT
CCTCAACGGTGCGATCGGGATCGGGATAGGGTCGCTTGCACTTGCAGTAC
AGCCCCTGGAAGTTCTGGTTATACAGATTGCCCACGTTACGTGGTTGAAC
GCCCTCGACTTGTGGGTTCAGGGAGCACTTGCCCAGACGCTGGGTGGGAC
AATCGCAGCGGAAATTCCGCTTAGTATAGAGCTCCACCAGTTCGTGGTGC
TCGTGACAGCGATAGGAGC

BS06846.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15141-PA 1215 CG15141-RA 263..1215 969..17 4765 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 12:21:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15141-RA 1683 CG15141-RA 403..1356 969..16 4770 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 12:21:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17411043..17411619 969..393 2885 100 Minus
2L 23513712 2L 17412790..17413172 398..16 1900 99.7 Minus
Blast to na_te.dros performed 2015-02-06 12:21:53
Subject Length Description Subject Range Query Range Score Percent Strand
I-element 5371 I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). 4857..4906 205..157 121 74 Minus

BS06846.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:53:54 Download gff for BS06846.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15141-PA 263..1215 17..969 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:37:25 Download gff for BS06846.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15141-PA 263..1215 17..969 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:42:57 Download gff for BS06846.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15141-RA 403..1361 11..969 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:51:18 Download gff for BS06846.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15141-RA 403..1361 11..969 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:51:18 Download gff for BS06846.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 17411043..17411618 394..969 100 -> Minus
2L 17412795..17413177 11..393 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:42:57 Download gff for BS06846.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17411043..17411618 394..969 100 -> Minus
arm_2L 17412795..17413177 11..393 99   Minus

BS06846.5prime Sequence

929 bp (838 high quality bases) assembled on 2005-12-04

> BS06846.5prime
GAAGTTATCAGTCGACATGAGCGAGTCGAATGCCACAGATGGTGTCCACG
AGGTTGAGGAGTCCAATCCGCTGGAGCAGTCGACCATTACGATGCTAGAT
GTCCTGGAACAGGAAAAGGAGCTGGAGGACGAGTACGCCGCAGTGCTGGG
CGCCTCCGATGAGAAGTCGTGCACTTACGCCAAGGGCCCCATCGGCCGAC
AGGCTCTGTACTCGTGCCTCACTTGTTGCCCCGAGGCGCGCGAGGATCTG
GACAAGGCCGCAGGAGTCTGCTTGGCCTGCTCCTATCGCTGTCACGAGCA
CCACGAACTGGTGGAGCTCTATACTAAGCGGAATTTCCGCTGCGATTGTC
CCACCCAGCGTCTGGGCAAGTGCTCCCTGAACCCACAAGTCGAGGGCGTT
CAACCACGTAACGTGGGCAATCTGTATAACCAGAACTTCCAGGGGCTGTA
CTGCAAGTGCAAGCGACCCTATCCCGATCCCGATCGCACCGTTGAGGAGG
TTATGCTGCAGTGCGCCATCTGCGAGGACTGGTTCCACTTGCCGCACATG
AAAGCGCCCGGCGCCAGCGACAAGTGGCTGGATGTCTGCAGCGAAATGAT
TTGCGATGGCTGCATGGATGCCAAACCCTTCCTAAAGGACTACACTGGAT
TAGCCCTGCAGCCTGTGCTAGAAGATGCGAAGGAGGACAAGCCGGAGGCT
GACGATAGCCAGCTGAAGAACGAGTTGGACCGCAGCATCTGCGATATCAT
GAAAGTTCCTGAAGGTGAATCTCAGCCAGACGAAGGCGAACCCAGCCAGA
AGCGCGCCAAACTGGACGATTGTCGTCGGCCCAAACCAACCNAGGAGCAT
CAGGGAGCTGCTTTCTGGACAANTGACTGGGCGAAATCACTCTGTCAGTG
CTCCGAATGCCTGTCGCTTTACAAGGAAC

BS06846.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:34:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15141-PA 1215 CG15141-RA 1..864 17..880 4282 99.7 Plus
CG15141-PA 1215 CG15141-RA 868..913 884..929 230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:39:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG15141-RA 1683 CG15141-RA 138..1053 14..929 4513 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:39:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17410778..17411619 14..855 4199 99.9 Plus
2L 23513712 2L 17412790..17412869 850..929 329 93.8 Plus
Blast to na_te.dros performed on 2015-02-12 00:39:09 has no hits.

BS06846.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:53:55 Download gff for BS06846.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15141-PA 1..913 17..929 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:37:26 Download gff for BS06846.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15141-PA 1..913 17..929 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 20:01:31 Download gff for BS06846.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15141-RA 133..1053 9..929 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:02:19 Download gff for BS06846.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15141-RA 133..1053 9..929 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:02:19 Download gff for BS06846.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 17410773..17411618 9..854 99 -> Plus
2L 17412795..17412869 855..929 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:01:31 Download gff for BS06846.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17410773..17411618 9..854 99 -> Plus
arm_2L 17412795..17412869 855..929 96   Plus

BS06846.complete Sequence

1247 bp (1247 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635642

> BS06846.complete
GAAGTTATCAGTCGACATGAGCGAGTCGAATGCCACAGATGGTGTCCACG
AGGTTGAGGAGTCCAATCCGCTGGAGCAGTCGACCATTACGATGCTAGAT
GTCCTGGAACAGGAAAAGGAGCTGGAGGACGAGTACGCCGCAGTGCTGGG
CGCCTCCGATGAGAAGTCGTGCACTTACGCCAAGGGCCCCATCGGCCGAC
AGGCTCTGTACTCGTGCCTCACTTGTTGCCCCGAGGCGCGCGAGGATCTG
GACAAGGCCGCAGGAGTCTGCTTGGCCTGCTCCTATCGCTGTCACGAGCA
CCACGAACTGGTGGAGCTCTATACTAAGCGGAATTTCCGCTGCGATTGTC
CCACCCAGCGTCTGGGCAAGTGCTCCCTGAACCCACAAGTCGAGGGCGTT
CAACCACGTAACGTGGGCAATCTGTATAACCAGAACTTCCAGGGGCTGTA
CTGCAAGTGCAAGCGACCCTATCCCGATCCCGATCGCACCGTTGAGGAGG
TTATGCTGCAGTGCGCCATCTGCGAGGACTGGTTCCACTTGCCGCACATG
AAAGCGCCCGGCGCCAGCGACAAGTGGCTGGATGTCTGCAGCGAAATGAT
TTGCGATGGCTGCATGGATGCCAAACCCTTCCTAAAGGACTACACTGGAT
TAGCCCTGCAGCCTGTGCTAGAAGATGCGAAGGAGGACAAGCCGGAGGCT
GACGATAGCCAGCTGAAGAACGAGTTGGACCGCAGCATCTGCGATATCAT
GAAAGTTCCTGAAGGTGAATCTCAGCCAGACGAAGGCGAACCCAGCCAGA
AGCGCGCCAAACTGGACGATTGTCGTCGGCCCAAACCAACCAAGGAGCAT
CAGGGAGCTGCTTTCTGGACAAATGACTGGCGAAAATCACTCTGTCAGTG
CTCCGAATGCCTGTCGCTTTACAAGGAACTTGCCGTGGAGTTTCTGCTGG
ATGTCGAGGATTCGGCTAAGACGTACGAGGAGCGCGGCATGAAGCGGGCT
GAAGAGAATTCCAGTTATGAGCAAGGAATCCGGGCACTGGCCTCCATTGA
CCGGACACAGCAAATCGATGCGATTACCGAATACAATCGCATGAAGGACA
AGCTAAAGGAATACCTGCAGGCATTCGCCGCCAGCAAGAAGGTAGTGACC
GAGGAGGATATCAATCGGTTCTTTGCCGGCATGCGCAATGAGAACAATGC
CAACCTGGGTCAGCCCTATTTCTGTCGCTAAAAGCTTTCTAGACCAT

BS06846.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15141-RA 1215 CG15141-PA 1..1215 17..1231 6075 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:09:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG15141-RA 1683 CG15141-RA 138..1356 14..1232 6095 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:09:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17410778..17411619 14..855 4210 100 Plus
2L 23513712 2L 17412790..17413172 850..1232 1900 99.7 Plus
Blast to na_te.dros performed 2014-11-27 14:09:57
Subject Length Description Subject Range Query Range Score Percent Strand
I-element 5371 I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). 4857..4906 1043..1091 121 74 Plus

BS06846.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:11:10 Download gff for BS06846.complete
Subject Subject Range Query Range Percent Splice Strand
CG15141-RA 1..1215 17..1231 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:56:59 Download gff for BS06846.complete
Subject Subject Range Query Range Percent Splice Strand
CG15141-RA 117..1345 9..1237 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:21 Download gff for BS06846.complete
Subject Subject Range Query Range Percent Splice Strand
CG15141-RA 141..1353 17..1229 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:11:10 Download gff for BS06846.complete
Subject Subject Range Query Range Percent Splice Strand
CG15141-RA 117..1345 9..1237 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:04:53 Download gff for BS06846.complete
Subject Subject Range Query Range Percent Splice Strand
CG15141-RA 141..1353 17..1229 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:04:53 Download gff for BS06846.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17410781..17411618 17..854 100 -> Plus
2L 17412795..17413169 855..1229 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:21 Download gff for BS06846.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17410781..17411618 17..854 100 -> Plus
arm_2L 17412795..17413169 855..1229 100   Plus

BS06846.pep Sequence

Translation from 16 to 1230

> BS06846.pep
MSESNATDGVHEVEESNPLEQSTITMLDVLEQEKELEDEYAAVLGASDEK
SCTYAKGPIGRQALYSCLTCCPEAREDLDKAAGVCLACSYRCHEHHELVE
LYTKRNFRCDCPTQRLGKCSLNPQVEGVQPRNVGNLYNQNFQGLYCKCKR
PYPDPDRTVEEVMLQCAICEDWFHLPHMKAPGASDKWLDVCSEMICDGCM
DAKPFLKDYTGLALQPVLEDAKEDKPEADDSQLKNELDRSICDIMKVPEG
ESQPDEGEPSQKRAKLDDCRRPKPTKEHQGAAFWTNDWRKSLCQCSECLS
LYKELAVEFLLDVEDSAKTYEERGMKRAEENSSYEQGIRALASIDRTQQI
DAITEYNRMKDKLKEYLQAFAASKKVVTEEDINRFFAGMRNENNANLGQP
YFCR*

BS06846.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:44:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15141-PA 404 CG15141-PA 1..404 1..404 2186 100 Plus