Clone BS06858 Report

Search the DGRC for BS06858

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:68
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG10732-RB
Protein status:BS06858.pep: full length peptide match
Sequenced Size:2462

Clone Sequence Records

BS06858.complete Sequence

2462 bp assembled on 2009-12-07

GenBank Submission: KX803694

> BS06858.complete
GAAGTTATCAGTCGACATGGTGCACGAAATCAACCCAAATTCGGATCAGG
GTGAAGGCGTAGTCAATTCGACCAGCTTGGAGGATGTTGCATTAAGCGAG
ATGAGCGACAACCGCGCCCAATCCATTCAGTCCCTACACAGCGTCTTGGA
AACGCCCACGCCCGATACCACGCCCAGCTTCGATGAGTTGCAGCAGCGCT
TGGAAGCCTCCAATAGGAACATGCAGCACCTGCACGACGAACAGGCGAAG
CTGTTACAAATCCAAAATTTGGCCAAGACTCACCTTAACGAGATGGAGCG
GCTGCGCCAGCAAGCCGATAGCTTACCCCACAATGTCAATGGGGGAGAGG
CCCCCAAATACGAGTCCGTGCAGCAGGTACAGGACGACATGGCGTCGCTG
GTGGGGCGCATGAAGAATCTCACCGCCTTTATACACAACCAGAACGAACT
GAGCACGGTGCTTGGCGATGATGGGCCCGAGATCCTGGCCGAGCAGGAAG
CCCTGCAGGAGAAACTGGAATCACTGCGCACCCAACGTGAGGATATGCGC
AATCTGGTGGACGAACTAAACAGCATCAACCGTGCGGCCAGGGAGACTGC
TAGAGTCATCAAAGAGAAAGAGGAGACTCCCACGCCTCCTCCCAAGCCAG
AGGAGGCTGCCCCAGCGGCTCCCAAGGAGCGTGTTGTTCCTGTGGAGTAT
CAGAGAAACGTACCCATCATACGCCAGGAGGCGGCCAACGCTGCTCAACG
GGCACTTCACGCACAGGCAATGATCAACCAGAAGACGGCAGATATAGAAG
CACTCAAGGCTCAGATGGCGAGACTAAAGGGAATGCTGTACACTGTTAGC
CAGATTGAAGAAAGTACTCCCAGCATGGGCTCCACCTTAGAGCGGCGTAG
TGAGGAAAGAACTAGCGTGGAGCGCGAATTGCCGGCCGAGATTGCCCAGC
GCGTATTCGCTCTGAACGATGTTACGAGCGAACTGAGAGCGGAAGCAGCA
AGCTTGCAAAAGGAGCGTGACCGTATCCTAGCCCTGAAGGCAGAGATTGA
GCGACGCAAACAACAGGCGGCCGCCGCTGTTCAAATGGGCGATGATGCAC
TTAAAAGAAGCAGTCTTACCCCAACACCCACCCCCATGAGACAGCGGATG
ACCGAGGAAGAGGATCCATCCGAAGTGGATAATTCTCTTCAGGCTACGCC
CACCAAGGAACAACTGCGCGATGAACTGCGCTCGCAGTGCGAGCGCCTGC
GAACGGAATACGAGCAGAAGCAGCGGGAACTGGAGCAGCGTTACGTAGCC
AGTAACAACACCACATCGGAGGCGGATGACGAGGCAAACGACGACACTGA
CAGCGATAAGTACTTCGCCAACGTACGTACCGCTTCCTCAGCGACCCTAA
AGAGGGCTCCATCCGCCAACACAGTGGTGGAGCAACGACGAGGTCAGCAA
CCTAACGTTCCCCCACAGCAGGCACCACCACCACCGCCGCCTGCTCCTCC
GTCGACGCTAAACGAAGATGACCTGAATGTGACACTTGATACGCTATCCC
TGGGTAATGACAGCATACCATCCAGCAGCAATAGATCGCAGTACATGCCG
CCCCCCATGCAACCAGTGCCTGGAATGTGGGCATCACACAACTCTGGAAG
TTCGTGGCATGGACAGCAGCCCGTCTACGGTCAGCCGAGCTCCAGTGCCG
GCACAGAGTTTAAAAAGCTGCCAGCCGCCCAACAAGGGGGCTCCTCAAAT
GGATCCGGATCGAATGCCTCTACCGACGCAGTTCTGCTGCAGCAGTTCAT
GCAGACGCAGCAAATGCTTATCAACTCTGTGTGCCAGTGCAACCAGGCAC
TGTGGCATCAACAGCGCGAAATCGACAACCTCAACCACCAGCTACATGCG
CTCCAGGATCGATTTAATGTTGTAGCATGCCAGGATCACAGCTTCGGCTT
GCGCTCGGAATCAGTACCGCCTCCGGTGGGCCCTGGAATGGGTCAGATGC
CCAACAATCTGTGCCTGGGCAGCAGTCGAGCTCAATCTGAGCAGCTATTT
AACTTTGGTGCCCACCAGAGCGCCTTTAGTAACTATCAGCGCAGCTGTCA
TCGTAGCGGGGCAGAATCGCATCATCATCAACAGCAGCAGCATCAGGCGC
AGCCGTTCCTTAACAATGCTGCTCCCCCGCCACCGCCGACGCACTTCAAC
AACGAGACACCCCTGTCGCCGCCTACTTACCGCTCAAGTCCAGGTCCCAT
CTTCATGAACCACCATAACAACACGATACATCAGAACAACTCGAATCTGC
GAACCCAGAACCAGCATGCCAACAATCTGCACTCGCTGCCCGAGGGAGCA
GCTGGTGGAGGAGCACCTGGTGGCGGTATTACATTGAACAATCAAGTACC
ACCCGGAAACAGAGCCAACAACTACTGGGACAACTTCCGCAGGTAAAAGC
TTTCTAGACCAT

BS06858.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG10732-RB 2430 CG10732-PB 1..2430 17..2446 12150 100 Plus
CG10732-RA 4974 CG10732-PA 833..3260 15..2442 12140 100 Plus
CG10732-RD 4875 CG10732-PD 833..2191 15..1373 6795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:26:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG10732-RB 3249 CG10732-RB 744..3175 15..2446 12160 100 Plus
CG10732-RA 5299 CG10732-RA 958..3385 15..2442 12140 100 Plus
CG10732-RD 5200 CG10732-RD 958..2316 15..1373 6795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:26:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13444366..13445898 99..1631 7665 100 Plus
3L 28110227 3L 13446341..13446887 1900..2446 2735 100 Plus
3L 28110227 3L 13446011..13446280 1631..1900 1350 100 Plus
3L 28110227 3L 13444220..13444305 15..100 430 100 Plus
Blast to na_te.dros performed 2014-11-28 02:26:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2541 2111..2326 146 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6776..6818 2112..2153 122 79.1 Plus

BS06858.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:50:06 Download gff for BS06858.complete
Subject Subject Range Query Range Percent Splice Strand
CG10732-RB 733..3160 17..2444 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:14:24 Download gff for BS06858.complete
Subject Subject Range Query Range Percent Splice Strand
CG10732-RB 746..3173 17..2444 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:25:48 Download gff for BS06858.complete
Subject Subject Range Query Range Percent Splice Strand
CG10732-RB 733..3160 17..2444 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:37 Download gff for BS06858.complete
Subject Subject Range Query Range Percent Splice Strand
CG10732-RB 746..3173 17..2444 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:37 Download gff for BS06858.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13444222..13444305 17..100 100 -> Plus
3L 13444368..13445898 101..1631 100 -> Plus
3L 13446012..13446280 1632..1900 100 -> Plus
3L 13446342..13446885 1901..2444 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:14:24 Download gff for BS06858.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13437322..13437405 17..100 100 -> Plus
arm_3L 13437468..13438998 101..1631 100 -> Plus
arm_3L 13439112..13439380 1632..1900 100 -> Plus
arm_3L 13439442..13439985 1901..2444 100   Plus

BS06858.3prime Sequence

906 bp (816 high quality bases) assembled on 2005-12-04

> BS06858.3prime
ATGGTCTAGAAAGCTTTTACCTGCGGAAGTTGTCCCAGTAGTTGTTGGCT
CTGTTTCCGGGTGGTACTTGATTGTTCAATGTAATACCGCCACCAGGTGC
TCCTCCACCAGCTGCTCCCTCGGGCAGCGAGTGCAGATTGTTGGCATGCT
GGTTCTGGGTTCGCAGATTCGAGTTGTTCTGATGTATCGTGTTGTTATGG
TGGTTCATGAAGATGGGACCTGGACTTGAGCGGTAAGTAGGCGGCGACAG
GGGTGTCTCGTTGTTGAAGTGCGTCGGCGGTGGCGGGGGAGCAGCATTGT
TAAGGAACGGCTGCGCCTGATGCTGCTGCTGTTGATGATGATGCGATTCT
GCCCCGCTACGATGACAGCTGCGCTGATAGTTACTAAAGGCGCTCTGGTG
GGCACCAAAGTTAAATAGCTGCTCAGATTGAGCTCGACTGCTGCCCAGGC
ACAGATTGTTGGGCATCTGACCCATTCCAGGGCCCACCGGAGGCGGTACT
GATTCCGAGCGCAAGCCGAAGCTGTGATCCTGGCATGCTACAACATTAAA
TCGATCCTGGAGCGCATGTAGCTGGTGGTTGAGGTTGTCGATTTCGCGCT
GTTGATGCCACAGTGCCTGGTTGCACTGGCACACAGAGTTGATAAGCATT
TGCTGCGTCTGCATGAACTGCTGCAGCAGAACTGCGTCGGTAGAGGCATT
CGATCCGGATCCATTTGAGGAGCCCCCTTGTTGGGCGGCTGGCAGCTTTT
TAAACTCTGTGCCGGCACTGGAGCTCGGCTGACCGTAGACGGGCTGCTGT
CCATGCCACGAACTTCCAGAGTTGTGTGATGCCCACATTCCAGGCACTGG
TTGCATGGGGGGCGGCATGTACTGCGATCTATTGCTGCTGGATGGTATGC
TGTCAT

BS06858.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:34:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG10732-PB 2430 CG10732-RB 1541..2430 906..17 4450 100 Minus
CG10732-PA 4974 CG10732-RA 2375..3260 906..21 4430 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10732-RB 3249 CG10732-RB 2286..3175 906..17 4450 100 Minus
CG10732-RD 5200 CG10732-RD 2401..3286 906..21 4430 100 Minus
CG10732-RA 5299 CG10732-RA 2500..3385 906..21 4430 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:12:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13446341..13446887 563..17 2735 100 Minus
3L 28110227 3L 13446011..13446280 832..563 1350 100 Minus
3L 28110227 3L 13445824..13445898 906..832 375 100 Minus
Blast to na_te.dros performed 2015-02-11 10:12:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2541 352..137 146 57.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6776..6818 351..310 122 79.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6826..7094 350..93 114 56.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2773..2846 382..308 111 62.7 Minus

BS06858.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:54:16 Download gff for BS06858.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10732-PB 1541..2430 17..906 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:37:54 Download gff for BS06858.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10732-PB 1541..2430 17..906 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:04:49 Download gff for BS06858.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10732-RB 2286..3186 4..906 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:18:41 Download gff for BS06858.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10732-RB 2286..3186 4..906 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:18:41 Download gff for BS06858.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 13445824..13445898 832..906 100 -> Minus
3L 13446012..13446280 563..831 100 -> Minus
3L 13446342..13446883 21..562 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:04:49 Download gff for BS06858.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13438924..13438998 832..906 100 -> Minus
arm_3L 13439112..13439380 563..831 100 -> Minus
arm_3L 13439442..13439983 21..562 100 -> Minus

BS06858.5prime Sequence

916 bp (857 high quality bases) assembled on 2005-12-04

> BS06858.5prime
GAAGTTATCAGTCGACATGGTGCACGAAATCAACCCAAATTCGGATCAGG
GTGAAGGCGTAGTCAATTCGACCAGCTTGGAGGATGTTGCATTAAGCGAG
ATGAGCGACAACCGCGCCCAATCCATTCAGTCCCTACACAGCGTCTTGGA
AACGCCCACGCCCGATACCACGCCCAGCTTCGATGAGTTGCAGCAGCGCT
TGGAAGCCTCCAATAGGAACATGCAGCACCTGCACGACGAACAGGCGAAG
CTGTTACAAATCCAAAATTTGGCCAAGACTCACCTTAACGAGATGGAGCG
GCTGCGCCAGCAAGCCGATAGCTTACCCCACAATGTCAATGGGGGAGAGG
CCCCCAAATACGAGTCCGTGCAGCAGGTACAGGACGACATGGCGTCGCTG
GTGGGGCGCATGAAGAATCTCACCGCCTTTATACACAACCAGAACGAACT
GAGCACGGTGCTTGGCGATGATGGGCCCGAGATCCTGGCCGAGCAGGAAG
CCCTGCAGGAGAAACTGGAATCACTGCGCACCCAACGTGAGGATATGCGC
AATCTGGTGGACGAACTAAACAGCATCAACCGTGCGGCCAGGGAGACTGC
TAGAGTCATCAAAGAGAAAGAGGAGACTCCCACGCCTCCTCCCAAGCCAG
AGGAGGCTGCCCCAGCGGCTCCCAAGGAGCGTGTTGTTCCTGTGGAGTAT
CAGAGAAACGTACCCATCATACGCCAGGAGGCGGCCAACGCTGCTCAACG
GGCACTTCACGCACAGGCAATGATCAACCAGAAGACGGCAGATATAGAAG
CACTCAAGGCTCAGATGGCGAGACTAAAGGGAATGCTGTACACTGTTAGC
CAGATTGAAGAAAGTACTCCCAGCATGGGCTCCACCTTAGAGCGGCGTAG
TGAGGAAAGAACTAGC

BS06858.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10732-PA 4974 CG10732-RA 833..1734 15..916 4510 100 Plus
CG10732-PB 2430 CG10732-RB 1..900 17..916 4500 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG10732-RD 5200 CG10732-RD 958..1859 15..916 4510 100 Plus
CG10732-RC 5206 CG10732-RC 958..1859 15..916 4510 100 Plus
CG10732-RB 3249 CG10732-RB 744..1645 15..916 4510 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13444366..13445183 99..916 4090 100 Plus
3L 28110227 3L 13444220..13444305 15..100 430 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:46:33 has no hits.

BS06858.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:54:17 Download gff for BS06858.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10732-PA 833..1734 15..916 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:37:55 Download gff for BS06858.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10732-PA 833..1734 15..916 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:36:26 Download gff for BS06858.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10732-RB 744..1645 15..916 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:19:49 Download gff for BS06858.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10732-RB 744..1645 15..916 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:19:49 Download gff for BS06858.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 13444220..13444305 15..100 100 -> Plus
3L 13444368..13445183 101..916 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:36:26 Download gff for BS06858.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13437320..13437405 15..100 100 -> Plus
arm_3L 13437468..13438283 101..916 100   Plus

BS06858.pep Sequence

Translation from 16 to 2445

> BS06858.pep
MVHEINPNSDQGEGVVNSTSLEDVALSEMSDNRAQSIQSLHSVLETPTPD
TTPSFDELQQRLEASNRNMQHLHDEQAKLLQIQNLAKTHLNEMERLRQQA
DSLPHNVNGGEAPKYESVQQVQDDMASLVGRMKNLTAFIHNQNELSTVLG
DDGPEILAEQEALQEKLESLRTQREDMRNLVDELNSINRAARETARVIKE
KEETPTPPPKPEEAAPAAPKERVVPVEYQRNVPIIRQEAANAAQRALHAQ
AMINQKTADIEALKAQMARLKGMLYTVSQIEESTPSMGSTLERRSEERTS
VERELPAEIAQRVFALNDVTSELRAEAASLQKERDRILALKAEIERRKQQ
AAAAVQMGDDALKRSSLTPTPTPMRQRMTEEEDPSEVDNSLQATPTKEQL
RDELRSQCERLRTEYEQKQRELEQRYVASNNTTSEADDEANDDTDSDKYF
ANVRTASSATLKRAPSANTVVEQRRGQQPNVPPQQAPPPPPPAPPSTLNE
DDLNVTLDTLSLGNDSIPSSSNRSQYMPPPMQPVPGMWASHNSGSSWHGQ
QPVYGQPSSSAGTEFKKLPAAQQGGSSNGSGSNASTDAVLLQQFMQTQQM
LINSVCQCNQALWHQQREIDNLNHQLHALQDRFNVVACQDHSFGLRSESV
PPPVGPGMGQMPNNLCLGSSRAQSEQLFNFGAHQSAFSNYQRSCHRSGAE
SHHHQQQQHQAQPFLNNAAPPPPPTHFNNETPLSPPTYRSSPGPIFMNHH
NNTIHQNNSNLRTQNQHANNLHSLPEGAAGGGAPGGGITLNNQVPPGNRA
NNYWDNFRR*

BS06858.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10732-PB 809 CG10732-PB 1..809 1..809 4203 100 Plus
CG10732-PA 1657 CG10732-PA 279..1086 1..808 4198 100 Plus
CG10732-PD 1624 CG10732-PD 279..1053 1..808 3990 95.9 Plus
CG10732-PC 1626 CG10732-PC 279..1055 1..808 3984 95.9 Plus