Clone Sequence Records
BS06918.complete Sequence
2018 bp assembled on 2009-12-07
GenBank Submission: KX803417
> BS06918.complete
GAAGTTATCAGTCGACATGTCGCGATCCGCACAAGAAGCTGCGGCGCTGC
TGCGGGGACTGCGGATCTTGTTGGAGGCGTGTGGGCGCGAGCATCTCGCC
CACGGTCGTCATCTGTGGAGCAATTCAAGCATTCGTGAGCTAATCGCCGA
GAATGTGGCGCACACACAGCAGCTGGTGAGAAGTTCCAGTCAAAATCCCA
CCGAGGAGCTGAAAAAACTGCAGCAAACTGTAAAAGAAACGGGCGAAAGG
GGCTACGTGGTGGCCAAAGGTATTTGCTCGCTGCTGGAGACGAAAATCAA
GATGTCCCGCGAGGAATCGGCCATCTCTGAGCCTGCACAAGTCTCCTCAA
TTCGTAAATCCACACCCACGGCACAAAATCCAGCAAGTTGGGACGCCGCC
AACTTGGATATATCATCCATAACGCTGCAGGAGTTCGAGGAGATACTCTC
GCGCCGGAACAAAGATCGTAGTGTTAGCTTGCGCACCCCGGCAACCAAAA
GCAACCAGACCATGCCCAAAAAAGAAACGTCAACCAATCCGGGCATCATT
ACCCAGGACACGGAGTATGTAAACAATGTGCTGCGGTTTGTGGCGGGCGC
CAAGGTGGAGGAGCAGCCACCAGATGCGCAGCCGAAGAAGAAGTCCGACC
AGCCGGCCATTGAAGTGCCCGAACTGAGCAAGGTGGCCAAACAGCGCAAG
GTTCCCTCCTCCCGGATAGGCAGAATGGCCTCCTTTGGCGGCCTGTTCGC
CGGCCTGGGCCTGGGAACCCTCAACGAGCTGACCAAGGGTGCACTCGGCC
TGGGCGGTTCGACCAGCATGCGAGAGGCGTTGCTCAGTCCCGCCAATGCT
GAACGCATCGTGGACACGCTATGCAAGGTGAGAGGAGCTGCCCTGAAGAT
CGGACAAATCCTGAGCATACAAGATTCCAGCGTTGTGTCGCCGCAACTGG
CCAAGGCGTTTGAGCGGGTGCGTCAGGCGGCGGACTATATGCCCGATTGG
CAGGTCGAACGCGTGATGAACACCCAATTGGGTGCCGATTGGCGACAGCG
TCTCAAGAGTTTCGAGGACAAACCCTTTGCGGCTGCCTCCATTGGCCAGG
TGCATCGGGCAACGCTGAGCGATGGCATGGATGTGGCCATTAAGATCCAA
TATCCCGGTGTCGCCCAGAGCATCGAGAGCGACATTGACAATTTGGTGGG
CATGCTGAAGGTGTGGGATGTCTTTCCACAGGGTTTCTTCATCGACAATG
TGGTGCGCGTGGCCAAACGTGAGTTGCAATGGGAGGTGGACTATGATCGC
GAGGCGGAATACACGGAGAAGTTTCGCGAAATGATCGCGCCCTATCCCGA
GTACTATGTACCGCGTGTGGTGCGCGATCTGACCACGTCCAGCGTTCTGA
CCACCGAACTGGTGCCCGGTGTGCCGCTCGATAAGTGTTTCGATCTGAGC
TACGAGCATCGCCGCCACATAGCCGCATCCGTGCTGAAGCTCTGCCTGCG
CGAGCTCTTCGAGATTGAGTGCATGCAGACGGATCCGAATTGGTCCAACT
TTCTGTACGATGCGCCCAGTCGCCGGCTAATGCTGATCGACTTCGGTTCG
ACGCGCTTCTATAGGCATGAATTCATCCGCAACTATCGCCGGGTGATCAT
GAGCGCCGCCGAGAACAATCGTCAGGGCGTTTTGGAGATGTCGCGCGAAA
TGGGCTTCCTAACCGGCTACGAGACGAAGCAAATGGAGCAGGCGCACGTG
GATGCGGTGATGATATTGGGCGAGATCTTTCGCTACGACGGTGATTTCGA
TTTCGGTCGACAGAATACCACCGAAAGATTGGCCGCCCTGGTGCCCACAA
TGGTGGCGCATCGATTGTGCCCGCCGCCCGAGGAGATATACTCCATTCAT
CGCAAGCTATCGGGCATTTTCCTGCTGTGCGCGCGTCTGAATGTGCGCAT
GAATTGCGTGCCCTTCTACAAGGACATCGTTCTGGGGAAGTTCAAGGACT
AGAAGCTTTCTAGACCAT
BS06918.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32649-RA | 1986 | CG32649-PA | 1..1986 | 17..2002 | 9930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32649-RA | 2280 | CG32649-RA | 160..2145 | 17..2002 | 9930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12899523..12900955 | 1449..17 | 7165 | 100 | Minus |
| X | 23542271 | X | 12898903..12899457 | 2002..1448 | 2775 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:21:32 has no hits.
BS06918.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:48:49 Download gff for
BS06918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 122..2107 | 17..2002 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:17 Download gff for
BS06918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 160..2145 | 17..2002 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:06:21 Download gff for
BS06918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 122..2107 | 17..2002 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:45 Download gff for
BS06918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 160..2145 | 17..2002 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:45 Download gff for
BS06918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12898903..12899455 | 1450..2002 | 100 | <- | Minus |
| X | 12899523..12900955 | 17..1449 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:17 Download gff for
BS06918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12792936..12793488 | 1450..2002 | 100 | <- | Minus |
| arm_X | 12793556..12794988 | 17..1449 | 100 | | Minus |
BS06918.3prime Sequence
974 bp (856 high quality bases) assembled on 2005-12-04
> BS06918.3prime
ATGGTCTAGAAAGCTTCTAGTCCTTGAACTTCCCCAGAACGATGTCCTTG
TAGAAGGGCACGCAATTCATGCGCACATTCAGACGCGCGCACAGCAGGAA
AATGCCCGATAGCTTGCGATGAATGGAGTATATCTCCTCGGGCGGCGGGC
ACAATCGATGCGCCACCATTGTGGGCACCAGGGCGGCCAATCTTTCGGTG
GTATTCTGTCGACCGAAATCGAAATCACCGTCGTAGCGAAAGATCTCGCC
CAATATCATCACCGCATCCACGTGCGCCTGCTCCATTTGCTTCGTCTCGT
AGCCGGTTAGGAAGCCCATTTCGCGCGACATCTCCAAAACGCCCTGACGA
TTGTTCTCGGCGGCGCTCATGATCACCCGGCGATAGTTGCGGATGAATTC
ATGCCTATAGAAGCGCGTCGAACCGAAGTCGATCAGCATTAGCCGGCGAC
TGGGCGCATCGTACAGAAAGTTGGACCAATTCGGATCCGTCTGCATGCAC
TCAATCTCGAAGAGCTCGCGCAGGCAGAGCTTCAGCACGGATGCGGCTAT
GTGGCGGCGATGCTCGTAGCTCAGATCGAAACACTTATCGAGCGGCACAC
CGGGCACCAGTTCGGTGGTCAGAACGCTGGACGTGGTCAGATCGCGCACC
ACACGCGGTACATAGTACTCGGGATAGGGCGCGATCATTTCGCGAAACTT
CTCCGTGTATTCCGCCTCGCGATCATAGTCCACCTCCCATTGCAACTCAC
GTTTGGCCACGCGCACCACATTGTCGATGAAGAAACCCTGTGGAAAGACA
TCCCACACCTTCAGCATGCCCACCAAATTGTCAATGTCGCTCTCGATGCT
CTGGGCGACACCGGGATATTGGATCTTAATGGCCACATCCATGCCATCGC
TCAGCGTTGCCCGATGCACCTGGNCAATGGAGGCAGCCGCAAAGGGTTTG
TCCTCGAAACTCTTGAAACGCTGT
BS06918.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32649-PA | 1986 | CG32649-RA | 1029..1986 | 974..17 | 4746 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:47:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32649-RA | 2280 | CG32649-RA | 1188..2145 | 974..17 | 4764 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:47:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12898903..12899457 | 17..571 | 2775 | 100 | Plus |
| X | 23542271 | X | 12899523..12899927 | 570..974 | 1999 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:47:39 has no hits.
BS06918.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:56:09 Download gff for
BS06918.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-PA | 1029..1986 | 17..974 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:40:21 Download gff for
BS06918.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-PA | 1029..1986 | 17..974 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:45:37 Download gff for
BS06918.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 1188..2150 | 13..974 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:18:57 Download gff for
BS06918.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 1188..2150 | 13..974 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:18:57 Download gff for
BS06918.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12898898..12899455 | 13..569 | 99 | <- | Plus |
| X | 12899523..12899927 | 570..974 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:45:37 Download gff for
BS06918.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12792931..12793488 | 13..569 | 99 | <- | Plus |
| arm_X | 12793556..12793960 | 570..974 | 99 | | Plus |
BS06918.5prime Sequence
938 bp (753 high quality bases) assembled on 2005-12-04
> BS06918.5prime
GAAGTTATCAGTCGACATGTCGCGATCCGCACAAGAAGCTGCGGCGCTGC
TGCGGGGACTGCGGATCTTGTTGGAGGCGTGTGGGCGCGAGCATCTCGCC
CACGGTCGTCATCTGTGGAGCAATTCAAGCATTCGTGAGCTAATCGCCGA
GAATGTGGCGCACACACAGCAGCTGGTGAGAAGTTCCAGTCAAAATCCCA
CCGAGGAGCTGAAAAAACTGCAGCAAACTGTAAAAGAAACGGGCGAAAGG
GGCTACGTGGTGGCCAAAGGTATTTGCTCGCTGCTGGAGACGAAAATCAA
GATGTCCCGCGAGGAATCGGCCATCTCTGAGCCTGCACAAGTCTCCTCAA
TTCGTAAATCCACACCCACGGCACAAAATCCAGCAAGTTGGGACGCCGCC
AACTTGGATATATCATCCATAACGCTGCAGGAGTTCGAGGAGATACTCTC
GCGCCGGAACAAAGATCGTAGTGTTAGCTTGCGCACCCCGGCAACCAAAA
GCAACCAGACCATGCCCAAAAAAGAAACGTCAACCAATCCGGGCATCATT
ACCCAGGACACGGAGTATGTAAACAATGTGCTGCGGTTTGTGGCGGGCGC
CAAGGTGGAGGAGCAGCCACCAGATGCGCAGCCGAAGAAGAAGTCCGACC
AGCCGGCCATTGAAGTGCCCGAACTGAGCAAGGTGGCCAAACAGCGCAAG
GTTCCCTCCTCCCGGATAGGCAGAATGGCCTCCTTTGGCGGCCTGTTCGC
CGGCCTGGGCCTGGGAACCCTNCACGAGCTGACCAAGGGTGCACTCGGCC
TGNGCGGTTCGACCAGCATGCGAGAGGCGTTGCTCAGTCCCGCCAATGCT
GAACGCATCGTGGACACGCTATGCAAGGTGAGAGGAGCTGCCCTGAAGAT
CGGGACAATCCTGAGCATACAAGATTCCAGCGTTGTGT
BS06918.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:36:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32649-PA | 1986 | CG32649-RA | 1..887 | 17..903 | 4372 | 99.6 | Plus |
| CG32649-PA | 1986 | CG32649-RA | 891..922 | 907..938 | 160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32649-RA | 2280 | CG32649-RA | 160..1081 | 17..938 | 4528 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:28:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12900034..12900955 | 938..17 | 4528 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-02-13 08:28:05 has no hits.
BS06918.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:56:09 Download gff for
BS06918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-PA | 1..922 | 17..938 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:40:23 Download gff for
BS06918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-PA | 1..922 | 17..938 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:15:39 Download gff for
BS06918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 154..1081 | 8..938 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:36:38 Download gff for
BS06918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 154..1081 | 8..938 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:36:38 Download gff for
BS06918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12900034..12900961 | 8..938 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:15:39 Download gff for
BS06918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12794067..12794994 | 8..938 | 99 | | Minus |
BS06918.pep Sequence
Translation from 16 to 2001
> BS06918.pep
MSRSAQEAAALLRGLRILLEACGREHLAHGRHLWSNSSIRELIAENVAHT
QQLVRSSSQNPTEELKKLQQTVKETGERGYVVAKGICSLLETKIKMSREE
SAISEPAQVSSIRKSTPTAQNPASWDAANLDISSITLQEFEEILSRRNKD
RSVSLRTPATKSNQTMPKKETSTNPGIITQDTEYVNNVLRFVAGAKVEEQ
PPDAQPKKKSDQPAIEVPELSKVAKQRKVPSSRIGRMASFGGLFAGLGLG
TLNELTKGALGLGGSTSMREALLSPANAERIVDTLCKVRGAALKIGQILS
IQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMNTQLGADWRQRLKSFE
DKPFAAASIGQVHRATLSDGMDVAIKIQYPGVAQSIESDIDNLVGMLKVW
DVFPQGFFIDNVVRVAKRELQWEVDYDREAEYTEKFREMIAPYPEYYVPR
VVRDLTTSSVLTTELVPGVPLDKCFDLSYEHRRHIAASVLKLCLRELFEI
ECMQTDPNWSNFLYDAPSRRLMLIDFGSTRFYRHEFIRNYRRVIMSAAEN
NRQGVLEMSREMGFLTGYETKQMEQAHVDAVMILGEIFRYDGDFDFGRQN
TTERLAALVPTMVAHRLCPPPEEIYSIHRKLSGIFLLCARLNVRMNCVPF
YKDIVLGKFKD*
BS06918.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32649-PA | 661 | CG32649-PA | 1..661 | 1..661 | 3378 | 100 | Plus |
| CG3608-PB | 518 | CG3608-PB | 80..369 | 278..563 | 208 | 24.7 | Plus |
| CG3608-PA | 518 | CG3608-PA | 80..369 | 278..563 | 208 | 24.7 | Plus |
| CG7616-PB | 557 | CG7616-PB | 99..339 | 272..511 | 168 | 21.8 | Plus |
| CG7616-PA | 557 | CG7616-PA | 99..339 | 272..511 | 168 | 21.8 | Plus |
