Clone BS06925 Report

Search the DGRC for BS06925

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:69
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptOsi14-RA
Protein status:BS06925.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06925.3prime Sequence

837 bp (785 high quality bases) assembled on 2005-12-04

> BS06925.3prime
ATGGTCTAGAAAGCTTCTACTGCTGCTGCTGGCCGGCGTAGGCCAATTGC
TGGGCATCGGACCCATCCTCGCTGATGCTGCGGGCATAGGGATAGGACGA
GGAGGCTCCCGAGCTCCAGCCGGCGCTGGCGGGTGCGGACCATGCGTTCG
AGTTGTAGGCTCCGGCAAAGGAGTTACCTCCGAACTTGTTGCCGAATCCG
CCCAGCAGGCGGGATCCGCCGACCAGAATGGCCAGGAAGAAGGCCAGCTT
GGCCACGATCACGGCCTTGAAGGTCAGCAGGGCCAGAAACCCGAGCACCA
GGGGAATGACGGCGAACAGCTTGGCGCCAATGGCCAGAGCCACGGGTCCC
AGCATCTTCTTGATCTTGCCACGGCCTTCATCGAGGGCACGAGCCACCTG
CTGGGTGGTCTCGGCGGGCAGCTTGAACTCCAGGTTGTGGGTGCTTAGGA
AGTCGGCGGCACTAGAGACGGCCAGATCCACTAGACGACCAGTACGCTCA
TCGGCATTCTGGGGCAGCTCGGCATAGACATCCTGCTCGCTCATCGATTT
TCCCGTGCGGGAAACGGGACTGGCGGGATCCCTCTGGAAGGTGACTCCAC
TGGCCAGCTCGATGTTGTTGCTCCTGGCGGCGCGGTTGAGTGCGGTGATG
CCCTTGACGGCCAGGCAGGTGGCCATGTCGTCGCTCTCCAGACAGGCGCC
CAGATACCGGGCGGCCCGGCCCAGGGTATTGTCGCCCTCGACCTGGTTGT
CTTGAACACTGGGCGCGGCAAAGACGCAGCTGGCCGCCCAGAGGGTCACA
CAAGCGATGGCAAACACTTTCATGTCGACTGATAACT

BS06925.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG1155-PA 807 Osi14-RA 1..807 823..17 4010 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
Osi14-RA 1091 CG1155-RA 124..934 823..13 4040 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:40:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6300217..6300581 377..13 1825 100 Minus
3R 32079331 3R 6299251..6299493 823..581 1200 99.6 Minus
3R 32079331 3R 6299957..6300165 583..375 1045 100 Minus
Blast to na_te.dros performed 2015-02-11 16:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
G5A 2841 G5A G5A 2841bp 60..116 481..537 123 68.4 Plus

BS06925.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:56:24 Download gff for BS06925.3prime
Subject Subject Range Query Range Percent Splice Strand
Osi14-PA 1..807 17..823 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:40:43 Download gff for BS06925.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1155-PA 1..807 17..823 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:44:40 Download gff for BS06925.3prime
Subject Subject Range Query Range Percent Splice Strand
Osi14-RA 113..938 8..833 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:18:00 Download gff for BS06925.3prime
Subject Subject Range Query Range Percent Splice Strand
Osi14-RA 113..938 8..833 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:18:00 Download gff for BS06925.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 6299240..6299492 582..833 98 -> Minus
3R 6299959..6300164 376..581 100 -> Minus
3R 6300219..6300585 8..375 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:44:40 Download gff for BS06925.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2124962..2125214 582..833 98 -> Minus
arm_3R 2125681..2125886 376..581 100 -> Minus
arm_3R 2125941..2126307 8..375 99   Minus

BS06925.5prime Sequence

837 bp (794 high quality bases) assembled on 2005-12-04

> BS06925.5prime
GAAGTTATCAGTCGACATGAAAGTGTTTGCCATCGCTTGTGTGACCCTCT
TGGCGGCCAGCTGCGTCTTTGCCGCGCCCAGTGTTCAAGACAACCAGGTC
GAGGGCGACAATACCCTGGGCCGGGCCGCCCGGTATCTGGGCGCCTGTCT
GGAGAGCGACGACATGGCCACCTGCCTGGCCGTCAAGGGCATCACCGCAC
TCAACCGCGCCGCCAGGAGCAACAACATCGAGCTGGCCAGTGGAGTCACC
TTCCAGAGGGATCCCGCCAGTCCCGTTTCCCGCACGGGAAAATCGATGAG
CGAGCAGGATGTCTATGCCGAGCTGCCCCAGAATGCCGATGAGCGTACTG
GTCGTCTAGTGGATCTGGCCGTCTCTAGTGCCGCCGACTTCCTAAGCACC
CACAACCTGGAGTTCAAGCTGCCCGCCGAGACCACCCAGCAGGTGGCTCG
TGCCCTCGATGAAGGCCGTGGCAAGATCAAGAAGATGCTGGGACCCGTGG
CTCTGGCCATTGGCGCCAAGCTGTTCGCCGTCATTCCCCTGGTGCTCGGG
TTTCTGGCCCTGCTGACCTTCAAGGCCGTGATCGTGGCCAAGCTGGCCTT
CTTCCTGGCCATTCTGGTCGGCGGATCCCGCCTGCTGGGCGGATTCGGCA
ACAAGTTCGGAGGTAACTCCTTTGCCGGAGCCTACAACTCGAACGCATGG
TCCGCACCCGCCAGCGCCGGCTGGAGCTCGGGAGCCTCCTCGTCCTATCC
CTATGCCCGCAGCATCAGCGAGGATGGGTCCGATGCCCAGCAATTGGCCT
ACGCCGGGCAGCAGCAGCAGTAGAAGCTTTCTAGACC

BS06925.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG1155-PA 807 Osi14-RA 1..807 17..823 4010 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 11:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
Osi14-RA 1091 CG1155-RA 124..934 17..827 4040 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 11:07:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6300217..6300581 463..827 1810 99.7 Plus
3R 32079331 3R 6299251..6299493 17..259 1215 100 Plus
3R 32079331 3R 6299957..6300165 257..465 1045 100 Plus
Blast to na_te.dros performed 2015-02-02 11:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
G5A 2841 G5A G5A 2841bp 60..116 359..303 123 68.4 Minus

BS06925.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:56:25 Download gff for BS06925.5prime
Subject Subject Range Query Range Percent Splice Strand
Osi14-PA 1..807 17..823 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:40:45 Download gff for BS06925.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1155-PA 1..807 17..823 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:36:19 Download gff for BS06925.5prime
Subject Subject Range Query Range Percent Splice Strand
Osi14-RA 113..938 7..832 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:44:41 Download gff for BS06925.5prime
Subject Subject Range Query Range Percent Splice Strand
Osi14-RA 113..938 7..832 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:44:41 Download gff for BS06925.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 6299240..6299492 7..258 98 -> Plus
3R 6299959..6300164 259..464 100 -> Plus
3R 6300219..6300585 465..832 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:36:19 Download gff for BS06925.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2124962..2125214 7..258 98 -> Plus
arm_3R 2125681..2125886 259..464 100 -> Plus
arm_3R 2125941..2126307 465..832 98   Plus

BS06925.complete Sequence

839 bp (839 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635667

> BS06925.complete
GAAGTTATCAGTCGACATGAAAGTGTTTGCCATCGCTTGTGTGACCCTCT
TGGCGGCCAGCTGCGTCTTTGCCGCGCCCAGTGTTCAAGACAACCAGGTC
GAGGGCGACAATACCCTGGGCCGGGCCGCCCGGTATCTGGGCGCCTGTCT
GGAGAGCGACGACATGGCCACCTGCCTGGCCGTCAAGGGCATCACCGCAC
TCAACCGCGCCGCCAGGAGCAACAACATCGAGCTGGCCAGTGGAGTCACC
TTCCAGAGGGATCCCGCCAGTCCCGTTTCCCGCACGGGAAAATCGATGAG
CGAGCAGGATGTCTATGCCGAGCTGCCCCAGAATGCCGATGAGCGTACTG
GTCGTCTAGTGGATCTGGCCGTCTCTAGTGCCGCCGACTTCCTAAGCACC
CACAACCTGGAGTTCAAGCTGCCCGCCGAGACCACCCAGCAGGTGGCTCG
TGCCCTCGATGAAGGCCGTGGCAAGATCAAGAAGATGCTGGGACCCGTGG
CTCTGGCCATTGGCGCCAAGCTGTTCGCCGTCATTCCCCTGGTGCTCGGG
TTTCTGGCCCTGCTGACCTTCAAGGCCGTGATCGTGGCCAAGCTGGCCTT
CTTCCTGGCCATTCTGGTCGGCGGATCCCGCCTGCTGGGCGGATTCGGCA
ACAAGTTCGGAGGTAACTCCTTTGCCGGAGCCTACAACTCGAACGCATGG
TCCGCACCCGCCAGCGCCGGCTGGAGCTCGGGAGCCTCCTCGTCCTATCC
CTATGCCCGCAGCATCAGCGAGGATGGGTCCGATGCCCAGCAATTGGCCT
ACGCCGGCCAGCAGCAGCAGTAGAAGCTTTCTAGACCAT

BS06925.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:14
Subject Length Description Subject Range Query Range Score Percent Strand
Osi14-RA 807 CG1155-PA 1..807 17..823 4035 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
Osi14-RA 1091 CG1155-RA 124..934 17..827 4055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6300217..6300581 463..827 1825 100 Plus
3R 32079331 3R 6299251..6299493 17..259 1215 100 Plus
3R 32079331 3R 6299957..6300165 257..465 1045 100 Plus
Blast to na_te.dros performed 2014-11-26 21:56:14
Subject Length Description Subject Range Query Range Score Percent Strand
G5A 2841 G5A G5A 2841bp 60..116 359..303 123 68.4 Minus

BS06925.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:10:47 Download gff for BS06925.complete
Subject Subject Range Query Range Percent Splice Strand
Osi14-RA 1..807 17..823 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:50:26 Download gff for BS06925.complete
Subject Subject Range Query Range Percent Splice Strand
Osi14-RA 109..934 7..832 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:41:22 Download gff for BS06925.complete
Subject Subject Range Query Range Percent Splice Strand
Osi14-RA 124..930 17..823 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:10:47 Download gff for BS06925.complete
Subject Subject Range Query Range Percent Splice Strand
Osi14-RA 109..934 7..832 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:17 Download gff for BS06925.complete
Subject Subject Range Query Range Percent Splice Strand
Osi14-RA 124..930 17..823 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:46:17 Download gff for BS06925.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6299959..6300164 259..464 100 -> Plus
3R 6300219..6300577 465..823 100   Plus
3R 6299251..6299492 17..258 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:41:22 Download gff for BS06925.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2124973..2125214 17..258 100 -> Plus
arm_3R 2125681..2125886 259..464 100 -> Plus
arm_3R 2125941..2126299 465..823 100   Plus

BS06925.pep Sequence

Translation from 16 to 822

> BS06925.pep
MKVFAIACVTLLAASCVFAAPSVQDNQVEGDNTLGRAARYLGACLESDDM
ATCLAVKGITALNRAARSNNIELASGVTFQRDPASPVSRTGKSMSEQDVY
AELPQNADERTGRLVDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEG
RGKIKKMLGPVALAIGAKLFAVIPLVLGFLALLTFKAVIVAKLAFFLAIL
VGGSRLLGGFGNKFGGNSFAGAYNSNAWSAPASAGWSSGASSSYPYARSI
SEDGSDAQQLAYAGQQQQ*

BS06925.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:12
Subject Length Description Subject Range Query Range Score Percent Strand
Osi14-PA 268 CG1155-PA 1..268 1..268 1336 100 Plus
Osi12-PA 295 CG1154-PA 11..269 3..268 286 28.5 Plus
Osi9-PA 233 CG15592-PA 1..233 3..267 270 29.5 Plus
Osi8-PA 274 CG15591-PA 71..274 48..250 215 29.7 Plus
Osi6-PB 312 CG1151-PB 27..306 1..254 206 29 Plus