Clone Sequence Records
BS06925.3prime Sequence
837 bp (785 high quality bases) assembled on 2005-12-04
> BS06925.3prime
ATGGTCTAGAAAGCTTCTACTGCTGCTGCTGGCCGGCGTAGGCCAATTGC
TGGGCATCGGACCCATCCTCGCTGATGCTGCGGGCATAGGGATAGGACGA
GGAGGCTCCCGAGCTCCAGCCGGCGCTGGCGGGTGCGGACCATGCGTTCG
AGTTGTAGGCTCCGGCAAAGGAGTTACCTCCGAACTTGTTGCCGAATCCG
CCCAGCAGGCGGGATCCGCCGACCAGAATGGCCAGGAAGAAGGCCAGCTT
GGCCACGATCACGGCCTTGAAGGTCAGCAGGGCCAGAAACCCGAGCACCA
GGGGAATGACGGCGAACAGCTTGGCGCCAATGGCCAGAGCCACGGGTCCC
AGCATCTTCTTGATCTTGCCACGGCCTTCATCGAGGGCACGAGCCACCTG
CTGGGTGGTCTCGGCGGGCAGCTTGAACTCCAGGTTGTGGGTGCTTAGGA
AGTCGGCGGCACTAGAGACGGCCAGATCCACTAGACGACCAGTACGCTCA
TCGGCATTCTGGGGCAGCTCGGCATAGACATCCTGCTCGCTCATCGATTT
TCCCGTGCGGGAAACGGGACTGGCGGGATCCCTCTGGAAGGTGACTCCAC
TGGCCAGCTCGATGTTGTTGCTCCTGGCGGCGCGGTTGAGTGCGGTGATG
CCCTTGACGGCCAGGCAGGTGGCCATGTCGTCGCTCTCCAGACAGGCGCC
CAGATACCGGGCGGCCCGGCCCAGGGTATTGTCGCCCTCGACCTGGTTGT
CTTGAACACTGGGCGCGGCAAAGACGCAGCTGGCCGCCCAGAGGGTCACA
CAAGCGATGGCAAACACTTTCATGTCGACTGATAACT
BS06925.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:36:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1155-PA | 807 | Osi14-RA | 1..807 | 823..17 | 4010 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:40:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-RA | 1091 | CG1155-RA | 124..934 | 823..13 | 4040 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:40:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6300217..6300581 | 377..13 | 1825 | 100 | Minus |
3R | 32079331 | 3R | 6299251..6299493 | 823..581 | 1200 | 99.6 | Minus |
3R | 32079331 | 3R | 6299957..6300165 | 583..375 | 1045 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 16:40:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G5A | 2841 | G5A G5A 2841bp | 60..116 | 481..537 | 123 | 68.4 | Plus |
BS06925.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:56:24 Download gff for
BS06925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-PA | 1..807 | 17..823 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:40:43 Download gff for
BS06925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1155-PA | 1..807 | 17..823 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:44:40 Download gff for
BS06925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 113..938 | 8..833 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:18:00 Download gff for
BS06925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 113..938 | 8..833 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:18:00 Download gff for
BS06925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6299240..6299492 | 582..833 | 98 | -> | Minus |
3R | 6299959..6300164 | 376..581 | 100 | -> | Minus |
3R | 6300219..6300585 | 8..375 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:44:40 Download gff for
BS06925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2124962..2125214 | 582..833 | 98 | -> | Minus |
arm_3R | 2125681..2125886 | 376..581 | 100 | -> | Minus |
arm_3R | 2125941..2126307 | 8..375 | 99 | | Minus |
BS06925.5prime Sequence
837 bp (794 high quality bases) assembled on 2005-12-04
> BS06925.5prime
GAAGTTATCAGTCGACATGAAAGTGTTTGCCATCGCTTGTGTGACCCTCT
TGGCGGCCAGCTGCGTCTTTGCCGCGCCCAGTGTTCAAGACAACCAGGTC
GAGGGCGACAATACCCTGGGCCGGGCCGCCCGGTATCTGGGCGCCTGTCT
GGAGAGCGACGACATGGCCACCTGCCTGGCCGTCAAGGGCATCACCGCAC
TCAACCGCGCCGCCAGGAGCAACAACATCGAGCTGGCCAGTGGAGTCACC
TTCCAGAGGGATCCCGCCAGTCCCGTTTCCCGCACGGGAAAATCGATGAG
CGAGCAGGATGTCTATGCCGAGCTGCCCCAGAATGCCGATGAGCGTACTG
GTCGTCTAGTGGATCTGGCCGTCTCTAGTGCCGCCGACTTCCTAAGCACC
CACAACCTGGAGTTCAAGCTGCCCGCCGAGACCACCCAGCAGGTGGCTCG
TGCCCTCGATGAAGGCCGTGGCAAGATCAAGAAGATGCTGGGACCCGTGG
CTCTGGCCATTGGCGCCAAGCTGTTCGCCGTCATTCCCCTGGTGCTCGGG
TTTCTGGCCCTGCTGACCTTCAAGGCCGTGATCGTGGCCAAGCTGGCCTT
CTTCCTGGCCATTCTGGTCGGCGGATCCCGCCTGCTGGGCGGATTCGGCA
ACAAGTTCGGAGGTAACTCCTTTGCCGGAGCCTACAACTCGAACGCATGG
TCCGCACCCGCCAGCGCCGGCTGGAGCTCGGGAGCCTCCTCGTCCTATCC
CTATGCCCGCAGCATCAGCGAGGATGGGTCCGATGCCCAGCAATTGGCCT
ACGCCGGGCAGCAGCAGCAGTAGAAGCTTTCTAGACC
BS06925.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:36:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1155-PA | 807 | Osi14-RA | 1..807 | 17..823 | 4010 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 11:07:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-RA | 1091 | CG1155-RA | 124..934 | 17..827 | 4040 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 11:07:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6300217..6300581 | 463..827 | 1810 | 99.7 | Plus |
3R | 32079331 | 3R | 6299251..6299493 | 17..259 | 1215 | 100 | Plus |
3R | 32079331 | 3R | 6299957..6300165 | 257..465 | 1045 | 100 | Plus |
Blast to na_te.dros performed 2015-02-02 11:07:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G5A | 2841 | G5A G5A 2841bp | 60..116 | 359..303 | 123 | 68.4 | Minus |
BS06925.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:56:25 Download gff for
BS06925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-PA | 1..807 | 17..823 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:40:45 Download gff for
BS06925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1155-PA | 1..807 | 17..823 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:36:19 Download gff for
BS06925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 113..938 | 7..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:44:41 Download gff for
BS06925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 113..938 | 7..832 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:44:41 Download gff for
BS06925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6299240..6299492 | 7..258 | 98 | -> | Plus |
3R | 6299959..6300164 | 259..464 | 100 | -> | Plus |
3R | 6300219..6300585 | 465..832 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:36:19 Download gff for
BS06925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2124962..2125214 | 7..258 | 98 | -> | Plus |
arm_3R | 2125681..2125886 | 259..464 | 100 | -> | Plus |
arm_3R | 2125941..2126307 | 465..832 | 98 | | Plus |
BS06925.complete Sequence
839 bp (839 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635667
> BS06925.complete
GAAGTTATCAGTCGACATGAAAGTGTTTGCCATCGCTTGTGTGACCCTCT
TGGCGGCCAGCTGCGTCTTTGCCGCGCCCAGTGTTCAAGACAACCAGGTC
GAGGGCGACAATACCCTGGGCCGGGCCGCCCGGTATCTGGGCGCCTGTCT
GGAGAGCGACGACATGGCCACCTGCCTGGCCGTCAAGGGCATCACCGCAC
TCAACCGCGCCGCCAGGAGCAACAACATCGAGCTGGCCAGTGGAGTCACC
TTCCAGAGGGATCCCGCCAGTCCCGTTTCCCGCACGGGAAAATCGATGAG
CGAGCAGGATGTCTATGCCGAGCTGCCCCAGAATGCCGATGAGCGTACTG
GTCGTCTAGTGGATCTGGCCGTCTCTAGTGCCGCCGACTTCCTAAGCACC
CACAACCTGGAGTTCAAGCTGCCCGCCGAGACCACCCAGCAGGTGGCTCG
TGCCCTCGATGAAGGCCGTGGCAAGATCAAGAAGATGCTGGGACCCGTGG
CTCTGGCCATTGGCGCCAAGCTGTTCGCCGTCATTCCCCTGGTGCTCGGG
TTTCTGGCCCTGCTGACCTTCAAGGCCGTGATCGTGGCCAAGCTGGCCTT
CTTCCTGGCCATTCTGGTCGGCGGATCCCGCCTGCTGGGCGGATTCGGCA
ACAAGTTCGGAGGTAACTCCTTTGCCGGAGCCTACAACTCGAACGCATGG
TCCGCACCCGCCAGCGCCGGCTGGAGCTCGGGAGCCTCCTCGTCCTATCC
CTATGCCCGCAGCATCAGCGAGGATGGGTCCGATGCCCAGCAATTGGCCT
ACGCCGGCCAGCAGCAGCAGTAGAAGCTTTCTAGACCAT
BS06925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-RA | 807 | CG1155-PA | 1..807 | 17..823 | 4035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-RA | 1091 | CG1155-RA | 124..934 | 17..827 | 4055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:56:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6300217..6300581 | 463..827 | 1825 | 100 | Plus |
3R | 32079331 | 3R | 6299251..6299493 | 17..259 | 1215 | 100 | Plus |
3R | 32079331 | 3R | 6299957..6300165 | 257..465 | 1045 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 21:56:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G5A | 2841 | G5A G5A 2841bp | 60..116 | 359..303 | 123 | 68.4 | Minus |
BS06925.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:10:47 Download gff for
BS06925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 1..807 | 17..823 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:50:26 Download gff for
BS06925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 109..934 | 7..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:41:22 Download gff for
BS06925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 124..930 | 17..823 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:10:47 Download gff for
BS06925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 109..934 | 7..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:17 Download gff for
BS06925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi14-RA | 124..930 | 17..823 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:46:17 Download gff for
BS06925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6299959..6300164 | 259..464 | 100 | -> | Plus |
3R | 6300219..6300577 | 465..823 | 100 | | Plus |
3R | 6299251..6299492 | 17..258 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:41:22 Download gff for
BS06925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2124973..2125214 | 17..258 | 100 | -> | Plus |
arm_3R | 2125681..2125886 | 259..464 | 100 | -> | Plus |
arm_3R | 2125941..2126299 | 465..823 | 100 | | Plus |
BS06925.pep Sequence
Translation from 16 to 822
> BS06925.pep
MKVFAIACVTLLAASCVFAAPSVQDNQVEGDNTLGRAARYLGACLESDDM
ATCLAVKGITALNRAARSNNIELASGVTFQRDPASPVSRTGKSMSEQDVY
AELPQNADERTGRLVDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEG
RGKIKKMLGPVALAIGAKLFAVIPLVLGFLALLTFKAVIVAKLAFFLAIL
VGGSRLLGGFGNKFGGNSFAGAYNSNAWSAPASAGWSSGASSSYPYARSI
SEDGSDAQQLAYAGQQQQ*
BS06925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi14-PA | 268 | CG1155-PA | 1..268 | 1..268 | 1336 | 100 | Plus |
Osi12-PA | 295 | CG1154-PA | 11..269 | 3..268 | 286 | 28.5 | Plus |
Osi9-PA | 233 | CG15592-PA | 1..233 | 3..267 | 270 | 29.5 | Plus |
Osi8-PA | 274 | CG15591-PA | 71..274 | 48..250 | 215 | 29.7 | Plus |
Osi6-PB | 312 | CG1151-PB | 27..306 | 1..254 | 206 | 29 | Plus |