Clone Sequence Records
BS06964.3prime Sequence
876 bp (788 high quality bases) assembled on 2005-12-04
> BS06964.3prime
ATGGTCTAGAAAGCTTTTACACCTTAATGGCATCATCAGTTGCGGGCGCC
AGCCAGGGTAGCGGGCCCACCTTGGATTGCCATGCCAGGCTGTAGGGATT
CGTCTGACCAAGTTCCTGCATCACCATGTGTACGCTAGCACCAATCTCCG
AGGGATACGCGTCACCCCGGTTCACAGCCTTAAGGGGAAGGGAGTGGGCA
GTGAAGAGGATGACCACATCATTTCGTTTCGTTTCCACAAATTTGGCCAG
CTCGTCGCGAATTCGCTGGGCAAACGTTTTGATTAGAAGTGGATGAGTGC
CCCACCTGTCGATAATGCTCCATTTGATATCCGAGGGCAGATTATTGCTC
CGATAATGAGTAAATATGGAGTTAAAGCTGGATCCGGAGGTGGCGCAGCT
GTACTGTGGATATTGTGAAAAGAGTACAACGCGCTCTGGTTTGTCCTTTT
CGATCTCGGCCAGCGTGTTCTCAGTGAGGGGATTCACGTAGCGGAAACCG
ACGTAGTGCTTGTGAGGTGCTGTCTCCGGGGAGATTCTGTCCAACTGCTC
GCACATGAGCTGGCCCTGCAGCTCGGTCCACTTAAGAATCGGTGAACCAC
CGCCGATCTCCTTGTACTTCTTCTGTACCTCGGGCGTCCTGCGCTGGGCG
ATCCACGGACCAAGACGGCTCTGCACCGGCAGCTGGATCATGTCCCGGTC
GGTCATAATACGCAGGAGGTAGTCATGCACCTGGTCCGTGTGGGTCGGAC
CGCCCATGTTCAGCATTAGGATCGCGGTCTTCGGTTTTTGGGCGCTCANG
TTGCGCACTCCTCCTGCCAGACCACTTGCCAGTCTGCAAAACTTTGTGTT
ATGCAAAAACATGTCGACTGATAACT
BS06964.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:37:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2098-PC | 846 | ferrochelatase-RC | 1..846 | 862..17 | 4186 | 99.7 | Minus |
CG2098-PA | 1155 | ferrochelatase-RA | 1..841 | 862..22 | 4161 | 99.7 | Minus |
CG2098-PB | 681 | ferrochelatase-RB | 45..367 | 344..22 | 1615 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 01:11:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RC | 1466 | CG2098-RC | 87..932 | 862..17 | 4204 | 99.8 | Minus |
FeCH-RA | 1407 | CG2098-RA | 87..927 | 862..22 | 4179 | 99.8 | Minus |
FeCH-RB | 1338 | CG2098-RB | 1..480 | 824..345 | 2374 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 01:11:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31811740..31812119 | 446..825 | 1874 | 99.5 | Plus |
3R | 32079331 | 3R | 31810994..31811321 | 17..344 | 1640 | 100 | Plus |
3R | 32079331 | 3R | 31811377..31811478 | 345..446 | 510 | 100 | Plus |
3R | 32079331 | 3R | 31812171..31812210 | 823..862 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 01:11:09 has no hits.
BS06964.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:57:44 Download gff for
BS06964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2098-PC | 1..846 | 17..862 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:42:33 Download gff for
BS06964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2098-PC | 1..846 | 17..862 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 05:52:17 Download gff for
BS06964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RC | 80..936 | 10..869 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:06:58 Download gff for
BS06964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RC | 80..936 | 10..869 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:06:58 Download gff for
BS06964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31810990..31811321 | 10..344 | 99 | <- | Plus |
3R | 31811377..31811478 | 345..446 | 100 | <- | Plus |
3R | 31811741..31812119 | 447..825 | 99 | <- | Plus |
3R | 31812174..31812217 | 826..869 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 05:52:17 Download gff for
BS06964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27636712..27637043 | 10..344 | 99 | <- | Plus |
arm_3R | 27637099..27637200 | 345..446 | 100 | <- | Plus |
arm_3R | 27637463..27637841 | 447..825 | 99 | <- | Plus |
arm_3R | 27637896..27637939 | 826..869 | 91 | | Plus |
BS06964.5prime Sequence
876 bp (751 high quality bases) assembled on 2005-12-04
> BS06964.5prime
GAAGTTATCAGTCGACATGTTTTTGCATAACACAAAGTTTTGCAGACTGG
CAAGTGGTCTGGCAGGAGGAGTGCGCAACCTGAGCGGCCAAAAACCGAAG
ACCGCGATCCTAATGCTGAACATGGGCGGTCCGACCCACACGGACCAGGT
GCATGACTACCTCCTGCGTATTATGACCGACCGGGACATGATCCAGCTGC
CGGTGCAGAGCCGTCTTGGTCCGTGGATCGCCCAGCGCAGGACGCCCGAG
GTACAGAAGAAGTACAAGGAGATCGGCGGTGGTTCACCGATTCTTAAGTG
GACCGAGCTGCAGGGCCAGCTCATGTGCGAGCAGTTGGACAGAATCTCCC
CGGAGACAGCACCTCACAAGCACTACGTCGGTTTCCGCTACGTGAATCCC
CTCACTGAGAACACGCTGGCCGAGATCGAAAAGGACAAACCAGAGCGCGT
TGTACTCTTTTCACAATATCCACAGTACAGCTGCGCCACCTCCGGATCCA
GCTTTAACTCCATATTTACTCATTATCGGAGCAATAATCTGCCCTCGGAT
ATCAAATGGAGCATTATCGACAGGTGGGGCACTCATCCACTTCTAATCAA
AACGTTTGCCCAGCGAATTCGCGACGAGCTGGCCAAATTTGTGGAAACGA
AACGAAATGATGTGGTCATCCTCTTCACTGCCCACTCCCTTCCCCTTAAG
GCTGTGAACCGGGGTGACGCGTATCCCTCGGAGATTGGTGCTAGCGTACA
CATGGTGATGCAGGAACTTGGTCAGACGAATCCCTACAGCCTGGCATGGC
AATCCAAGGTGGGCCCGCTACCCTGGCTGGCGCCCGCAACTGATGATGGC
ATTAAGGTGTAAAAGCTTTCTAGACC
BS06964.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:37:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2098-PC | 846 | ferrochelatase-RC | 1..846 | 17..862 | 4205 | 99.8 | Plus |
CG2098-PA | 1155 | ferrochelatase-RA | 1..841 | 17..857 | 4180 | 99.8 | Plus |
CG2098-PB | 681 | ferrochelatase-RB | 45..367 | 535..857 | 1590 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:44:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RC | 1466 | CG2098-RC | 87..932 | 17..862 | 4215 | 99.9 | Plus |
FeCH-RA | 1407 | CG2098-RA | 87..927 | 17..857 | 4190 | 99.9 | Plus |
FeCH-RB | 1338 | CG2098-RB | 1..480 | 55..534 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:44:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31811740..31812119 | 433..54 | 1900 | 100 | Minus |
3R | 32079331 | 3R | 31810994..31811321 | 862..535 | 1625 | 99.7 | Minus |
3R | 32079331 | 3R | 31811377..31811478 | 534..433 | 510 | 100 | Minus |
3R | 32079331 | 3R | 31812171..31812210 | 56..17 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 12:44:24 has no hits.
BS06964.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:57:45 Download gff for
BS06964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2098-PC | 1..846 | 17..862 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:42:34 Download gff for
BS06964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2098-PC | 1..846 | 17..862 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:03:27 Download gff for
BS06964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RC | 80..936 | 10..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:15:09 Download gff for
BS06964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RC | 80..936 | 10..869 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:15:09 Download gff for
BS06964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31810990..31811321 | 535..869 | 98 | <- | Minus |
3R | 31811377..31811478 | 433..534 | 100 | <- | Minus |
3R | 31811741..31812119 | 54..432 | 100 | <- | Minus |
3R | 31812174..31812217 | 10..53 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:03:27 Download gff for
BS06964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27636712..27637043 | 535..869 | 98 | <- | Minus |
arm_3R | 27637099..27637200 | 433..534 | 100 | <- | Minus |
arm_3R | 27637463..27637841 | 54..432 | 100 | <- | Minus |
arm_3R | 27637896..27637939 | 10..53 | 91 | | Minus |
BS06964.complete Sequence
878 bp (878 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635675
> BS06964.complete
GAAGTTATCAGTCGACATGTTTTTGCATAACACAAAGTTTTGCAGACTGG
CAAGTGGTCTGGCAGGAGGAGTGCGCAACCTGAGCGGCCAAAAACCGAAG
ACCGCGATCCTAATGCTGAACATGGGCGGTCCGACCCACACGGACCAGGT
GCATGACTACCTCCTGCGTATTATGACCGACCGGGACATGATCCAGCTGC
CGGTGCAGAGCCGTCTTGGTCCGTGGATCGCCCAGCGCAGGACGCCCGAG
GTACAGAAGAAGTACAAGGAGATCGGCGGTGGTTCACCGATTCTTAAGTG
GACCGAGCTGCAGGGCCAGCTCATGTGCGAGCAGTTGGACAGAATCTCCC
CGGAGACAGCACCTCACAAGCACTACGTCGGTTTCCGCTACGTGAATCCC
CTCACTGAGAACACGCTGGCCGAGATCGAAAAGGACAAACCAGAGCGCGT
TGTACTCTTTTCACAATATCCACAGTACAGCTGCGCCACCTCCGGATCCA
GCTTTAACTCCATATTTACTCATTATCGGAGCAATAATCTGCCCTCGGAT
ATCAAATGGAGCATTATCGACAGGTGGGGCACTCATCCACTTCTAATCAA
AACGTTTGCCCAGCGAATTCGCGACGAGCTGGCCAAATTTGTGGAAACGA
AACGAAATGATGTGGTCATCCTCTTCACTGCCCACTCCCTTCCCCTTAAG
GCTGTGAACCGGGGTGACGCGTATCCCTCGGAGATTGGTGCTAGCGTACA
CATGGTGATGCAGGAACTTGGTCAGACGAATCCCTACAGCCTGGCATGGC
AATCCAAGGTGGGCCCGCTACCCTGGCTGGCGCCCGCAACTGATGATGCC
ATTAAGGTGTAAAAGCTTTCTAGACCAT
BS06964.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:08:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RC | 846 | CG2098-PC | 1..846 | 17..862 | 4230 | 100 | Plus |
FeCH-RA | 1155 | CG2098-PA | 1..841 | 17..857 | 4205 | 100 | Plus |
FeCH-RB | 681 | CG2098-PB | 45..367 | 535..857 | 1615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:08:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RC | 1466 | CG2098-RC | 87..932 | 17..862 | 4230 | 100 | Plus |
FeCH-RA | 1407 | CG2098-RA | 87..927 | 17..857 | 4205 | 100 | Plus |
FeCH-RB | 1338 | CG2098-RB | 1..480 | 55..534 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:08:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31811740..31812119 | 433..54 | 1900 | 100 | Minus |
3R | 32079331 | 3R | 31810994..31811321 | 862..535 | 1640 | 100 | Minus |
3R | 32079331 | 3R | 31811377..31811478 | 534..433 | 510 | 100 | Minus |
3R | 32079331 | 3R | 31812171..31812210 | 56..17 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:08:38 has no hits.
BS06964.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:10:39 Download gff for
BS06964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ferrochelatase-RC | 1..846 | 17..862 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:56:52 Download gff for
BS06964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ferrochelatase-RC | 47..903 | 10..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:36:14 Download gff for
BS06964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RC | 95..930 | 25..860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:10:39 Download gff for
BS06964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ferrochelatase-RC | 47..903 | 10..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:14:09 Download gff for
BS06964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RC | 95..930 | 25..860 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:14:09 Download gff for
BS06964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31810996..31811321 | 535..860 | 100 | <- | Minus |
3R | 31811377..31811478 | 433..534 | 100 | <- | Minus |
3R | 31811741..31812119 | 54..432 | 100 | <- | Minus |
3R | 31812174..31812202 | 25..53 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:36:14 Download gff for
BS06964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27636718..27637043 | 535..860 | 100 | <- | Minus |
arm_3R | 27637099..27637200 | 433..534 | 100 | <- | Minus |
arm_3R | 27637463..27637841 | 54..432 | 100 | <- | Minus |
arm_3R | 27637896..27637924 | 25..53 | 100 | | Minus |
BS06964.pep Sequence
Translation from 16 to 861
> BS06964.pep
MFLHNTKFCRLASGLAGGVRNLSGQKPKTAILMLNMGGPTHTDQVHDYLL
RIMTDRDMIQLPVQSRLGPWIAQRRTPEVQKKYKEIGGGSPILKWTELQG
QLMCEQLDRISPETAPHKHYVGFRYVNPLTENTLAEIEKDKPERVVLFSQ
YPQYSCATSGSSFNSIFTHYRSNNLPSDIKWSIIDRWGTHPLLIKTFAQR
IRDELAKFVETKRNDVVILFTAHSLPLKAVNRGDAYPSEIGASVHMVMQE
LGQTNPYSLAWQSKVGPLPWLAPATDDAIKV*
BS06964.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-PC | 281 | CG2098-PC | 1..281 | 1..281 | 1490 | 100 | Plus |
FeCH-PA | 384 | CG2098-PA | 1..280 | 1..280 | 1486 | 100 | Plus |
FeCH-PB | 226 | CG2098-PB | 12..122 | 170..280 | 568 | 97.3 | Plus |