Clone BS06964 Report

Search the DGRC for BS06964

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:69
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptFeCH-RC
Protein status:BS06964.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06964.3prime Sequence

876 bp (788 high quality bases) assembled on 2005-12-04

> BS06964.3prime
ATGGTCTAGAAAGCTTTTACACCTTAATGGCATCATCAGTTGCGGGCGCC
AGCCAGGGTAGCGGGCCCACCTTGGATTGCCATGCCAGGCTGTAGGGATT
CGTCTGACCAAGTTCCTGCATCACCATGTGTACGCTAGCACCAATCTCCG
AGGGATACGCGTCACCCCGGTTCACAGCCTTAAGGGGAAGGGAGTGGGCA
GTGAAGAGGATGACCACATCATTTCGTTTCGTTTCCACAAATTTGGCCAG
CTCGTCGCGAATTCGCTGGGCAAACGTTTTGATTAGAAGTGGATGAGTGC
CCCACCTGTCGATAATGCTCCATTTGATATCCGAGGGCAGATTATTGCTC
CGATAATGAGTAAATATGGAGTTAAAGCTGGATCCGGAGGTGGCGCAGCT
GTACTGTGGATATTGTGAAAAGAGTACAACGCGCTCTGGTTTGTCCTTTT
CGATCTCGGCCAGCGTGTTCTCAGTGAGGGGATTCACGTAGCGGAAACCG
ACGTAGTGCTTGTGAGGTGCTGTCTCCGGGGAGATTCTGTCCAACTGCTC
GCACATGAGCTGGCCCTGCAGCTCGGTCCACTTAAGAATCGGTGAACCAC
CGCCGATCTCCTTGTACTTCTTCTGTACCTCGGGCGTCCTGCGCTGGGCG
ATCCACGGACCAAGACGGCTCTGCACCGGCAGCTGGATCATGTCCCGGTC
GGTCATAATACGCAGGAGGTAGTCATGCACCTGGTCCGTGTGGGTCGGAC
CGCCCATGTTCAGCATTAGGATCGCGGTCTTCGGTTTTTGGGCGCTCANG
TTGCGCACTCCTCCTGCCAGACCACTTGCCAGTCTGCAAAACTTTGTGTT
ATGCAAAAACATGTCGACTGATAACT

BS06964.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:37:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG2098-PC 846 ferrochelatase-RC 1..846 862..17 4186 99.7 Minus
CG2098-PA 1155 ferrochelatase-RA 1..841 862..22 4161 99.7 Minus
CG2098-PB 681 ferrochelatase-RB 45..367 344..22 1615 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 01:11:12
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-RC 1466 CG2098-RC 87..932 862..17 4204 99.8 Minus
FeCH-RA 1407 CG2098-RA 87..927 862..22 4179 99.8 Minus
FeCH-RB 1338 CG2098-RB 1..480 824..345 2374 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 01:11:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31811740..31812119 446..825 1874 99.5 Plus
3R 32079331 3R 31810994..31811321 17..344 1640 100 Plus
3R 32079331 3R 31811377..31811478 345..446 510 100 Plus
3R 32079331 3R 31812171..31812210 823..862 200 100 Plus
Blast to na_te.dros performed on 2015-02-09 01:11:09 has no hits.

BS06964.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:57:44 Download gff for BS06964.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2098-PC 1..846 17..862 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:42:33 Download gff for BS06964.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2098-PC 1..846 17..862 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 05:52:17 Download gff for BS06964.3prime
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 80..936 10..869 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:06:58 Download gff for BS06964.3prime
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 80..936 10..869 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:06:58 Download gff for BS06964.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 31810990..31811321 10..344 99 <- Plus
3R 31811377..31811478 345..446 100 <- Plus
3R 31811741..31812119 447..825 99 <- Plus
3R 31812174..31812217 826..869 91   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 05:52:17 Download gff for BS06964.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27636712..27637043 10..344 99 <- Plus
arm_3R 27637099..27637200 345..446 100 <- Plus
arm_3R 27637463..27637841 447..825 99 <- Plus
arm_3R 27637896..27637939 826..869 91   Plus

BS06964.5prime Sequence

876 bp (751 high quality bases) assembled on 2005-12-04

> BS06964.5prime
GAAGTTATCAGTCGACATGTTTTTGCATAACACAAAGTTTTGCAGACTGG
CAAGTGGTCTGGCAGGAGGAGTGCGCAACCTGAGCGGCCAAAAACCGAAG
ACCGCGATCCTAATGCTGAACATGGGCGGTCCGACCCACACGGACCAGGT
GCATGACTACCTCCTGCGTATTATGACCGACCGGGACATGATCCAGCTGC
CGGTGCAGAGCCGTCTTGGTCCGTGGATCGCCCAGCGCAGGACGCCCGAG
GTACAGAAGAAGTACAAGGAGATCGGCGGTGGTTCACCGATTCTTAAGTG
GACCGAGCTGCAGGGCCAGCTCATGTGCGAGCAGTTGGACAGAATCTCCC
CGGAGACAGCACCTCACAAGCACTACGTCGGTTTCCGCTACGTGAATCCC
CTCACTGAGAACACGCTGGCCGAGATCGAAAAGGACAAACCAGAGCGCGT
TGTACTCTTTTCACAATATCCACAGTACAGCTGCGCCACCTCCGGATCCA
GCTTTAACTCCATATTTACTCATTATCGGAGCAATAATCTGCCCTCGGAT
ATCAAATGGAGCATTATCGACAGGTGGGGCACTCATCCACTTCTAATCAA
AACGTTTGCCCAGCGAATTCGCGACGAGCTGGCCAAATTTGTGGAAACGA
AACGAAATGATGTGGTCATCCTCTTCACTGCCCACTCCCTTCCCCTTAAG
GCTGTGAACCGGGGTGACGCGTATCCCTCGGAGATTGGTGCTAGCGTACA
CATGGTGATGCAGGAACTTGGTCAGACGAATCCCTACAGCCTGGCATGGC
AATCCAAGGTGGGCCCGCTACCCTGGCTGGCGCCCGCAACTGATGATGGC
ATTAAGGTGTAAAAGCTTTCTAGACC

BS06964.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG2098-PC 846 ferrochelatase-RC 1..846 17..862 4205 99.8 Plus
CG2098-PA 1155 ferrochelatase-RA 1..841 17..857 4180 99.8 Plus
CG2098-PB 681 ferrochelatase-RB 45..367 535..857 1590 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-RC 1466 CG2098-RC 87..932 17..862 4215 99.9 Plus
FeCH-RA 1407 CG2098-RA 87..927 17..857 4190 99.9 Plus
FeCH-RB 1338 CG2098-RB 1..480 55..534 2400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:44:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31811740..31812119 433..54 1900 100 Minus
3R 32079331 3R 31810994..31811321 862..535 1625 99.7 Minus
3R 32079331 3R 31811377..31811478 534..433 510 100 Minus
3R 32079331 3R 31812171..31812210 56..17 200 100 Minus
Blast to na_te.dros performed on 2015-02-12 12:44:24 has no hits.

BS06964.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:57:45 Download gff for BS06964.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2098-PC 1..846 17..862 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:42:34 Download gff for BS06964.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2098-PC 1..846 17..862 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:03:27 Download gff for BS06964.5prime
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 80..936 10..869 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:15:09 Download gff for BS06964.5prime
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 80..936 10..869 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:15:09 Download gff for BS06964.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 31810990..31811321 535..869 98 <- Minus
3R 31811377..31811478 433..534 100 <- Minus
3R 31811741..31812119 54..432 100 <- Minus
3R 31812174..31812217 10..53 91   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:03:27 Download gff for BS06964.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27636712..27637043 535..869 98 <- Minus
arm_3R 27637099..27637200 433..534 100 <- Minus
arm_3R 27637463..27637841 54..432 100 <- Minus
arm_3R 27637896..27637939 10..53 91   Minus

BS06964.complete Sequence

878 bp (878 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635675

> BS06964.complete
GAAGTTATCAGTCGACATGTTTTTGCATAACACAAAGTTTTGCAGACTGG
CAAGTGGTCTGGCAGGAGGAGTGCGCAACCTGAGCGGCCAAAAACCGAAG
ACCGCGATCCTAATGCTGAACATGGGCGGTCCGACCCACACGGACCAGGT
GCATGACTACCTCCTGCGTATTATGACCGACCGGGACATGATCCAGCTGC
CGGTGCAGAGCCGTCTTGGTCCGTGGATCGCCCAGCGCAGGACGCCCGAG
GTACAGAAGAAGTACAAGGAGATCGGCGGTGGTTCACCGATTCTTAAGTG
GACCGAGCTGCAGGGCCAGCTCATGTGCGAGCAGTTGGACAGAATCTCCC
CGGAGACAGCACCTCACAAGCACTACGTCGGTTTCCGCTACGTGAATCCC
CTCACTGAGAACACGCTGGCCGAGATCGAAAAGGACAAACCAGAGCGCGT
TGTACTCTTTTCACAATATCCACAGTACAGCTGCGCCACCTCCGGATCCA
GCTTTAACTCCATATTTACTCATTATCGGAGCAATAATCTGCCCTCGGAT
ATCAAATGGAGCATTATCGACAGGTGGGGCACTCATCCACTTCTAATCAA
AACGTTTGCCCAGCGAATTCGCGACGAGCTGGCCAAATTTGTGGAAACGA
AACGAAATGATGTGGTCATCCTCTTCACTGCCCACTCCCTTCCCCTTAAG
GCTGTGAACCGGGGTGACGCGTATCCCTCGGAGATTGGTGCTAGCGTACA
CATGGTGATGCAGGAACTTGGTCAGACGAATCCCTACAGCCTGGCATGGC
AATCCAAGGTGGGCCCGCTACCCTGGCTGGCGCCCGCAACTGATGATGCC
ATTAAGGTGTAAAAGCTTTCTAGACCAT

BS06964.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:08:40
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-RC 846 CG2098-PC 1..846 17..862 4230 100 Plus
FeCH-RA 1155 CG2098-PA 1..841 17..857 4205 100 Plus
FeCH-RB 681 CG2098-PB 45..367 535..857 1615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-RC 1466 CG2098-RC 87..932 17..862 4230 100 Plus
FeCH-RA 1407 CG2098-RA 87..927 17..857 4205 100 Plus
FeCH-RB 1338 CG2098-RB 1..480 55..534 2400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31811740..31812119 433..54 1900 100 Minus
3R 32079331 3R 31810994..31811321 862..535 1640 100 Minus
3R 32079331 3R 31811377..31811478 534..433 510 100 Minus
3R 32079331 3R 31812171..31812210 56..17 200 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:08:38 has no hits.

BS06964.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:10:39 Download gff for BS06964.complete
Subject Subject Range Query Range Percent Splice Strand
ferrochelatase-RC 1..846 17..862 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:56:52 Download gff for BS06964.complete
Subject Subject Range Query Range Percent Splice Strand
ferrochelatase-RC 47..903 10..869 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:36:14 Download gff for BS06964.complete
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 95..930 25..860 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:10:39 Download gff for BS06964.complete
Subject Subject Range Query Range Percent Splice Strand
ferrochelatase-RC 47..903 10..869 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:14:09 Download gff for BS06964.complete
Subject Subject Range Query Range Percent Splice Strand
FeCH-RC 95..930 25..860 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:14:09 Download gff for BS06964.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31810996..31811321 535..860 100 <- Minus
3R 31811377..31811478 433..534 100 <- Minus
3R 31811741..31812119 54..432 100 <- Minus
3R 31812174..31812202 25..53 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:36:14 Download gff for BS06964.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27636718..27637043 535..860 100 <- Minus
arm_3R 27637099..27637200 433..534 100 <- Minus
arm_3R 27637463..27637841 54..432 100 <- Minus
arm_3R 27637896..27637924 25..53 100   Minus

BS06964.pep Sequence

Translation from 16 to 861

> BS06964.pep
MFLHNTKFCRLASGLAGGVRNLSGQKPKTAILMLNMGGPTHTDQVHDYLL
RIMTDRDMIQLPVQSRLGPWIAQRRTPEVQKKYKEIGGGSPILKWTELQG
QLMCEQLDRISPETAPHKHYVGFRYVNPLTENTLAEIEKDKPERVVLFSQ
YPQYSCATSGSSFNSIFTHYRSNNLPSDIKWSIIDRWGTHPLLIKTFAQR
IRDELAKFVETKRNDVVILFTAHSLPLKAVNRGDAYPSEIGASVHMVMQE
LGQTNPYSLAWQSKVGPLPWLAPATDDAIKV*

BS06964.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:40
Subject Length Description Subject Range Query Range Score Percent Strand
FeCH-PC 281 CG2098-PC 1..281 1..281 1490 100 Plus
FeCH-PA 384 CG2098-PA 1..280 1..280 1486 100 Plus
FeCH-PB 226 CG2098-PB 12..122 170..280 568 97.3 Plus