Clone BS06966 Report

Search the DGRC for BS06966

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:69
Well:66
Vector:pDNR-Dual
Associated Gene/Transcriptfbp-RA
Protein status:BS06966.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06966.3prime Sequence

981 bp (723 high quality bases) assembled on 2005-12-04

> BS06966.3prime
ATGGTCTAGAAAGCTTTCACTTTAAGTAGCTAAGTGCCTCCTCCACGTCG
GACTTGGATCCTAGGAATATGGGACTGCGCTCGTGGATCTTCTTGGGCAC
AATGTCCAAAATGCTGATCTTTCCGTCGCTGGCCAGACCTCCAGCCTGGA
TCATCAGATAGGCCATGGGCACGCACTCGTACAGCAGACGAAGTTTTCCG
CTGGGAGCGGACTTTGTTGCCGGATAGATAAAGATGCCGCCGTATTTAAT
GGTGCGATGCACATCCGCGACCATGGAACCCACGTACCGCGCTCCATAGG
GCTTTCCCTTGGCGGGATCCTTCTTGGCCGCAATGTAGTTGAAGACACCA
TCCTCCCAATCCGCTGCATATCCCTCGTTGATAGAGTATATCTTTCCCTT
CTCCGGCACCCGCATGTTGGGATCGGTCAGCACGAACTCTCCGATGGCCG
GGTCATAAGTGAAGCCATTCACTCCCGAACCCAGACCCAGGACAATTGCT
GTGGCCGAACCGTATAGCGCGTAGCCGGCGGCCACCAGCTGATTTCCGGG
CTGCAGTGCATCCTCCACTGTGGGCGGACCATCGCTTTTCTTGCGGTAAA
TGGCGAAGATTGAACCGATCGACACCAGGCAGTCTATGTTGGAGGATCCA
TCCAAGGGATCGAAGCACACGATGTATTTGCCCTGTTTCTCCACTTCCAC
CTCGATCACATTCTCGTTCTCCTCGGAAACCATTAGACATGTGGTATAGG
ATGACTTCAGCATGTTGATGAACAGCTCGTTGGAGAGCACGTCCAGTTTC
TTGACCTCCTCGCCTTGGACATTCACGTCGCCAGCGAATCCATGGAGCTT
GGCGATACCTGCCTTCCGCACCGCGGATGATGTAGCCTTGATGGCGGTCT
GGATGGAGTTGAGCAGCTGGGAGAGATCGCCAGTGGCGCTCTTGACTTTC
GCTGCTCCTGCAGCACGAAACCCGTCAGCGT

BS06966.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:37:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG31692-PA 1005 fbp-RA 77..1005 945..17 4645 100 Minus
CG31692-PB 1032 fbp-RB 104..1032 945..17 4645 100 Minus
CG31692-PA 1005 fbp-RA 40..76 981..945 160 97.2 Minus
CG31692-PB 1032 fbp-RB 67..103 981..945 160 97.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:30:33
Subject Length Description Subject Range Query Range Score Percent Strand
fbp-RE 1202 CG31692-RE 184..1149 981..17 4790 99.8 Minus
fbp-RD 1185 CG31692-RD 167..1132 981..17 4790 99.8 Minus
fbp-RC 1113 CG31692-RC 95..1060 981..17 4790 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:30:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19761640..19762308 17..685 3345 100 Plus
2L 23513712 2L 19762487..19762787 682..981 1440 99.3 Plus
Blast to na_te.dros performed on 2015-02-10 21:30:30 has no hits.

BS06966.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:57:49 Download gff for BS06966.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31692-PB 67..1032 17..981 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:42:39 Download gff for BS06966.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31692-PB 67..1032 17..981 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:12:55 Download gff for BS06966.3prime
Subject Subject Range Query Range Percent Splice Strand
fbp-RC 95..1065 11..981 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:51:46 Download gff for BS06966.3prime
Subject Subject Range Query Range Percent Splice Strand
fbp-RC 95..1065 11..981 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:51:46 Download gff for BS06966.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19761635..19762305 11..682 99 <- Plus
2L 19762488..19762787 683..981 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:12:55 Download gff for BS06966.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19761635..19762305 11..682 99 <- Plus
arm_2L 19762488..19762787 683..981 99   Plus

BS06966.5prime Sequence

897 bp (787 high quality bases) assembled on 2005-12-04

> BS06966.5prime
GAAGTTATCAGTCGACATGACCCAACAGAGGCCAGCTTTCGACTCCAATG
CGATGACGCTGACGCGTTTCGTGCTGCAGGAGCAGCGAAAGTTCAAGAGC
GCCACTGGCGATCTCTCCCAGCTGCTCAACTCCATCCAGACCGCCATCAA
GGCTACATCATCCGCGGTGCGGAAGGCAGGTATCGCCAAGCTCCATGGAT
TCGCTGGCGACGTGAATGTCCAAGGCGAGGAGGTCAAGAAACTGGACGTG
CTCTCCAACGAGCTGTTCATCAACATGCTGAAGTCATCCTATACCACATG
TCTAATGGTTTCCGAGGAGAACGAGAATGTGATCGAGGTGGAAGTGGAGA
AACAGGGCAAATACATCGTGTGCTTCGATCCCTTGGATGGATCCTCCAAC
ATAGACTGCCTGGTGTCGATCGGTTCAATCTTCGCCATTTACCGCAAGAA
AAGCGATGGTCCGCCCACAGTGGAGGATGCACTGCAGCCCGGAAATCAGC
TGGTGGCCGCCGGCTACGCGCTATACGGTTCGGCCACAGCAATTGTCCTG
GGTCTGGGTTCGGGAGTGAATGGCTTCACTTATGACCCGGCCATCGGAGA
GTTCGTGCTGACCGATCCCAACATGCGGGTGCCGGAGAAGGGAAAGATAT
ACTCTATCAACGAGGGATATGCAGCGGATTGGGAGGATGGTGTCTTCAAC
TACATTGCGGCCAAGAAGGATCCCGCCAAGGGAAAGCCCTATGGAGCGCG
GTACGTGGGTTCCATGGTCGCGGATGTGCATCGCACCATTAAATACGGCG
GCATCTTTATCTATCCGGCAACAAAGTCCGCTCCCAGCGGAAAACTTCGT
CTGCTGTACGAGTGCGTGCCCATGGCCTATCTGATGATCCAGGCTGG

BS06966.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:37:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG31692-PA 1005 fbp-RA 1..881 17..897 4405 100 Plus
CG31692-PB 1032 fbp-RB 28..908 17..897 4405 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:13:59
Subject Length Description Subject Range Query Range Score Percent Strand
fbp-RE 1202 CG31692-RE 145..1025 17..897 4405 100 Plus
fbp-RA 1130 CG31692-RA 73..953 17..897 4405 100 Plus
fbp-RD 1185 CG31692-RD 140..1008 29..897 4345 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19761764..19762308 897..353 2725 100 Minus
2L 23513712 2L 19762487..19762826 356..17 1700 100 Minus
Blast to na_te.dros performed on 2015-02-12 20:13:58 has no hits.

BS06966.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:57:50 Download gff for BS06966.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31692-PB 28..908 17..897 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:42:40 Download gff for BS06966.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31692-PB 28..908 17..897 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:25:36 Download gff for BS06966.5prime
Subject Subject Range Query Range Percent Splice Strand
fbp-RA 73..953 17..897 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:33:50 Download gff for BS06966.5prime
Subject Subject Range Query Range Percent Splice Strand
fbp-RA 73..953 17..897 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:33:50 Download gff for BS06966.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19761764..19762305 356..897 100 <- Minus
2L 19762488..19762835 7..355 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:25:36 Download gff for BS06966.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19761764..19762305 356..897 100 <- Minus
arm_2L 19762488..19762835 7..355 98   Minus

BS06966.complete Sequence

1037 bp (1037 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635677

> BS06966.complete
GAAGTTATCAGTCGACATGACCCAACAGAGGCCAGCTTTCGACTCCAATG
CGATGACGCTGACGCGTTTCGTGCTGCAGGAGCAGCGAAAGTTCAAGAGC
GCCACTGGCGATCTCTCCCAGCTGCTCAACTCCATCCAGACCGCCATCAA
GGCTACATCATCCGCGGTGCGGAAGGCAGGTATCGCCAAGCTCCATGGAT
TCGCTGGCGACGTGAATGTCCAAGGCGAGGAGGTCAAGAAACTGGACGTG
CTCTCCAACGAGCTGTTCATCAACATGCTGAAGTCATCCTATACCACATG
TCTAATGGTTTCCGAGGAGAACGAGAATGTGATCGAGGTGGAAGTGGAGA
AACAGGGCAAATACATCGTGTGCTTCGATCCCTTGGATGGATCCTCCAAC
ATAGACTGCCTGGTGTCGATCGGTTCAATCTTCGCCATTTACCGCAAGAA
AAGCGATGGTCCGCCCACAGTGGAGGATGCACTGCAGCCCGGAAATCAGC
TGGTGGCCGCCGGCTACGCGCTATACGGTTCGGCCACAGCAATTGTCCTG
GGTCTGGGTTCGGGAGTGAATGGCTTCACTTATGACCCGGCCATCGGAGA
GTTCGTGCTGACCGATCCCAACATGCGGGTGCCGGAGAAGGGAAAGATAT
ACTCTATCAACGAGGGATATGCAGCGGATTGGGAGGATGGTGTCTTCAAC
TACATTGCGGCCAAGAAGGATCCCGCCAAGGGAAAGCCCTATGGAGCGCG
GTACGTGGGTTCCATGGTCGCGGATGTGCATCGCACCATTAAATACGGCG
GCATCTTTATCTATCCGGCAACAAAGTCCGCTCCCAGCGGAAAACTTCGT
CTGCTGTACGAGTGCGTGCCCATGGCCTATCTGATGATCCAGGCTGGAGG
TCTGGCCAGCGACGGAAAGATCAGCATTTTGGACATTGTGCCCAAGAAGA
TCCACGAGCGCAGTCCCATATTCCTAGGATCCAAGTCCGACGTGGAGGAG
GCACTTAGCTACTTAAAGTGAAAGCTTTCTAGACCAT

BS06966.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
fbp-RE 1005 CG31692-PE 1..1005 17..1021 5025 100 Plus
fbp-RA 1005 CG31692-PA 1..1005 17..1021 5025 100 Plus
fbp-RD 969 CG31692-PD 1..969 53..1021 4845 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:46:47
Subject Length Description Subject Range Query Range Score Percent Strand
fbp-RE 1202 CG31692-RE 145..1149 17..1021 5025 100 Plus
fbp-RA 1130 CG31692-RA 73..1077 17..1021 5025 100 Plus
fbp-RD 1185 CG31692-RD 140..1132 29..1021 4965 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:46:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19761640..19762308 1021..353 3345 100 Minus
2L 23513712 2L 19762487..19762826 356..17 1700 100 Minus
Blast to na_te.dros performed on 2014-11-26 14:46:44 has no hits.

BS06966.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:10:42 Download gff for BS06966.complete
Subject Subject Range Query Range Percent Splice Strand
fbp-RB 28..1032 17..1021 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:50:19 Download gff for BS06966.complete
Subject Subject Range Query Range Percent Splice Strand
fbp-RB 143..1152 17..1027 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:26 Download gff for BS06966.complete
Subject Subject Range Query Range Percent Splice Strand
fbp-RA 73..1076 17..1020 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:10:43 Download gff for BS06966.complete
Subject Subject Range Query Range Percent Splice Strand
fbp-RB 143..1152 17..1027 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:04 Download gff for BS06966.complete
Subject Subject Range Query Range Percent Splice Strand
fbp-RA 73..1076 17..1020 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:04 Download gff for BS06966.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19761641..19762305 356..1020 100 <- Minus
2L 19762488..19762826 17..355 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:26 Download gff for BS06966.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19762488..19762826 17..355 100   Minus
arm_2L 19761641..19762305 356..1020 100 <- Minus

BS06966.pep Sequence

Translation from 16 to 1020

> BS06966.pep
MTQQRPAFDSNAMTLTRFVLQEQRKFKSATGDLSQLLNSIQTAIKATSSA
VRKAGIAKLHGFAGDVNVQGEEVKKLDVLSNELFINMLKSSYTTCLMVSE
ENENVIEVEVEKQGKYIVCFDPLDGSSNIDCLVSIGSIFAIYRKKSDGPP
TVEDALQPGNQLVAAGYALYGSATAIVLGLGSGVNGFTYDPAIGEFVLTD
PNMRVPEKGKIYSINEGYAADWEDGVFNYIAAKKDPAKGKPYGARYVGSM
VADVHRTIKYGGIFIYPATKSAPSGKLRLLYECVPMAYLMIQAGGLASDG
KISILDIVPKKIHERSPIFLGSKSDVEEALSYLK*

BS06966.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:24
Subject Length Description Subject Range Query Range Score Percent Strand
fbp-PE 334 CG31692-PE 1..334 1..334 1702 100 Plus
fbp-PA 334 CG31692-PA 1..334 1..334 1702 100 Plus
fbp-PD 322 CG31692-PD 1..322 13..334 1640 100 Plus
fbp-PC 322 CG31692-PC 1..322 13..334 1640 100 Plus