Clone Sequence Records
BS06966.3prime Sequence
981 bp (723 high quality bases) assembled on 2005-12-04
> BS06966.3prime
ATGGTCTAGAAAGCTTTCACTTTAAGTAGCTAAGTGCCTCCTCCACGTCG
GACTTGGATCCTAGGAATATGGGACTGCGCTCGTGGATCTTCTTGGGCAC
AATGTCCAAAATGCTGATCTTTCCGTCGCTGGCCAGACCTCCAGCCTGGA
TCATCAGATAGGCCATGGGCACGCACTCGTACAGCAGACGAAGTTTTCCG
CTGGGAGCGGACTTTGTTGCCGGATAGATAAAGATGCCGCCGTATTTAAT
GGTGCGATGCACATCCGCGACCATGGAACCCACGTACCGCGCTCCATAGG
GCTTTCCCTTGGCGGGATCCTTCTTGGCCGCAATGTAGTTGAAGACACCA
TCCTCCCAATCCGCTGCATATCCCTCGTTGATAGAGTATATCTTTCCCTT
CTCCGGCACCCGCATGTTGGGATCGGTCAGCACGAACTCTCCGATGGCCG
GGTCATAAGTGAAGCCATTCACTCCCGAACCCAGACCCAGGACAATTGCT
GTGGCCGAACCGTATAGCGCGTAGCCGGCGGCCACCAGCTGATTTCCGGG
CTGCAGTGCATCCTCCACTGTGGGCGGACCATCGCTTTTCTTGCGGTAAA
TGGCGAAGATTGAACCGATCGACACCAGGCAGTCTATGTTGGAGGATCCA
TCCAAGGGATCGAAGCACACGATGTATTTGCCCTGTTTCTCCACTTCCAC
CTCGATCACATTCTCGTTCTCCTCGGAAACCATTAGACATGTGGTATAGG
ATGACTTCAGCATGTTGATGAACAGCTCGTTGGAGAGCACGTCCAGTTTC
TTGACCTCCTCGCCTTGGACATTCACGTCGCCAGCGAATCCATGGAGCTT
GGCGATACCTGCCTTCCGCACCGCGGATGATGTAGCCTTGATGGCGGTCT
GGATGGAGTTGAGCAGCTGGGAGAGATCGCCAGTGGCGCTCTTGACTTTC
GCTGCTCCTGCAGCACGAAACCCGTCAGCGT
BS06966.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:37:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31692-PA | 1005 | fbp-RA | 77..1005 | 945..17 | 4645 | 100 | Minus |
CG31692-PB | 1032 | fbp-RB | 104..1032 | 945..17 | 4645 | 100 | Minus |
CG31692-PA | 1005 | fbp-RA | 40..76 | 981..945 | 160 | 97.2 | Minus |
CG31692-PB | 1032 | fbp-RB | 67..103 | 981..945 | 160 | 97.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:30:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-RE | 1202 | CG31692-RE | 184..1149 | 981..17 | 4790 | 99.8 | Minus |
fbp-RD | 1185 | CG31692-RD | 167..1132 | 981..17 | 4790 | 99.8 | Minus |
fbp-RC | 1113 | CG31692-RC | 95..1060 | 981..17 | 4790 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:30:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19761640..19762308 | 17..685 | 3345 | 100 | Plus |
2L | 23513712 | 2L | 19762487..19762787 | 682..981 | 1440 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:30:30 has no hits.
BS06966.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:57:49 Download gff for
BS06966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31692-PB | 67..1032 | 17..981 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:42:39 Download gff for
BS06966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31692-PB | 67..1032 | 17..981 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:12:55 Download gff for
BS06966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RC | 95..1065 | 11..981 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:51:46 Download gff for
BS06966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RC | 95..1065 | 11..981 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:51:46 Download gff for
BS06966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19761635..19762305 | 11..682 | 99 | <- | Plus |
2L | 19762488..19762787 | 683..981 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:12:55 Download gff for
BS06966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19761635..19762305 | 11..682 | 99 | <- | Plus |
arm_2L | 19762488..19762787 | 683..981 | 99 | | Plus |
BS06966.5prime Sequence
897 bp (787 high quality bases) assembled on 2005-12-04
> BS06966.5prime
GAAGTTATCAGTCGACATGACCCAACAGAGGCCAGCTTTCGACTCCAATG
CGATGACGCTGACGCGTTTCGTGCTGCAGGAGCAGCGAAAGTTCAAGAGC
GCCACTGGCGATCTCTCCCAGCTGCTCAACTCCATCCAGACCGCCATCAA
GGCTACATCATCCGCGGTGCGGAAGGCAGGTATCGCCAAGCTCCATGGAT
TCGCTGGCGACGTGAATGTCCAAGGCGAGGAGGTCAAGAAACTGGACGTG
CTCTCCAACGAGCTGTTCATCAACATGCTGAAGTCATCCTATACCACATG
TCTAATGGTTTCCGAGGAGAACGAGAATGTGATCGAGGTGGAAGTGGAGA
AACAGGGCAAATACATCGTGTGCTTCGATCCCTTGGATGGATCCTCCAAC
ATAGACTGCCTGGTGTCGATCGGTTCAATCTTCGCCATTTACCGCAAGAA
AAGCGATGGTCCGCCCACAGTGGAGGATGCACTGCAGCCCGGAAATCAGC
TGGTGGCCGCCGGCTACGCGCTATACGGTTCGGCCACAGCAATTGTCCTG
GGTCTGGGTTCGGGAGTGAATGGCTTCACTTATGACCCGGCCATCGGAGA
GTTCGTGCTGACCGATCCCAACATGCGGGTGCCGGAGAAGGGAAAGATAT
ACTCTATCAACGAGGGATATGCAGCGGATTGGGAGGATGGTGTCTTCAAC
TACATTGCGGCCAAGAAGGATCCCGCCAAGGGAAAGCCCTATGGAGCGCG
GTACGTGGGTTCCATGGTCGCGGATGTGCATCGCACCATTAAATACGGCG
GCATCTTTATCTATCCGGCAACAAAGTCCGCTCCCAGCGGAAAACTTCGT
CTGCTGTACGAGTGCGTGCCCATGGCCTATCTGATGATCCAGGCTGG
BS06966.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:37:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31692-PA | 1005 | fbp-RA | 1..881 | 17..897 | 4405 | 100 | Plus |
CG31692-PB | 1032 | fbp-RB | 28..908 | 17..897 | 4405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:13:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-RE | 1202 | CG31692-RE | 145..1025 | 17..897 | 4405 | 100 | Plus |
fbp-RA | 1130 | CG31692-RA | 73..953 | 17..897 | 4405 | 100 | Plus |
fbp-RD | 1185 | CG31692-RD | 140..1008 | 29..897 | 4345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:13:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19761764..19762308 | 897..353 | 2725 | 100 | Minus |
2L | 23513712 | 2L | 19762487..19762826 | 356..17 | 1700 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 20:13:58 has no hits.
BS06966.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:57:50 Download gff for
BS06966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31692-PB | 28..908 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:42:40 Download gff for
BS06966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31692-PB | 28..908 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:25:36 Download gff for
BS06966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RA | 73..953 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:33:50 Download gff for
BS06966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RA | 73..953 | 17..897 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:33:50 Download gff for
BS06966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19761764..19762305 | 356..897 | 100 | <- | Minus |
2L | 19762488..19762835 | 7..355 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:25:36 Download gff for
BS06966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19761764..19762305 | 356..897 | 100 | <- | Minus |
arm_2L | 19762488..19762835 | 7..355 | 98 | | Minus |
BS06966.complete Sequence
1037 bp (1037 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635677
> BS06966.complete
GAAGTTATCAGTCGACATGACCCAACAGAGGCCAGCTTTCGACTCCAATG
CGATGACGCTGACGCGTTTCGTGCTGCAGGAGCAGCGAAAGTTCAAGAGC
GCCACTGGCGATCTCTCCCAGCTGCTCAACTCCATCCAGACCGCCATCAA
GGCTACATCATCCGCGGTGCGGAAGGCAGGTATCGCCAAGCTCCATGGAT
TCGCTGGCGACGTGAATGTCCAAGGCGAGGAGGTCAAGAAACTGGACGTG
CTCTCCAACGAGCTGTTCATCAACATGCTGAAGTCATCCTATACCACATG
TCTAATGGTTTCCGAGGAGAACGAGAATGTGATCGAGGTGGAAGTGGAGA
AACAGGGCAAATACATCGTGTGCTTCGATCCCTTGGATGGATCCTCCAAC
ATAGACTGCCTGGTGTCGATCGGTTCAATCTTCGCCATTTACCGCAAGAA
AAGCGATGGTCCGCCCACAGTGGAGGATGCACTGCAGCCCGGAAATCAGC
TGGTGGCCGCCGGCTACGCGCTATACGGTTCGGCCACAGCAATTGTCCTG
GGTCTGGGTTCGGGAGTGAATGGCTTCACTTATGACCCGGCCATCGGAGA
GTTCGTGCTGACCGATCCCAACATGCGGGTGCCGGAGAAGGGAAAGATAT
ACTCTATCAACGAGGGATATGCAGCGGATTGGGAGGATGGTGTCTTCAAC
TACATTGCGGCCAAGAAGGATCCCGCCAAGGGAAAGCCCTATGGAGCGCG
GTACGTGGGTTCCATGGTCGCGGATGTGCATCGCACCATTAAATACGGCG
GCATCTTTATCTATCCGGCAACAAAGTCCGCTCCCAGCGGAAAACTTCGT
CTGCTGTACGAGTGCGTGCCCATGGCCTATCTGATGATCCAGGCTGGAGG
TCTGGCCAGCGACGGAAAGATCAGCATTTTGGACATTGTGCCCAAGAAGA
TCCACGAGCGCAGTCCCATATTCCTAGGATCCAAGTCCGACGTGGAGGAG
GCACTTAGCTACTTAAAGTGAAAGCTTTCTAGACCAT
BS06966.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:46:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-RE | 1005 | CG31692-PE | 1..1005 | 17..1021 | 5025 | 100 | Plus |
fbp-RA | 1005 | CG31692-PA | 1..1005 | 17..1021 | 5025 | 100 | Plus |
fbp-RD | 969 | CG31692-PD | 1..969 | 53..1021 | 4845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:46:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-RE | 1202 | CG31692-RE | 145..1149 | 17..1021 | 5025 | 100 | Plus |
fbp-RA | 1130 | CG31692-RA | 73..1077 | 17..1021 | 5025 | 100 | Plus |
fbp-RD | 1185 | CG31692-RD | 140..1132 | 29..1021 | 4965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:46:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19761640..19762308 | 1021..353 | 3345 | 100 | Minus |
2L | 23513712 | 2L | 19762487..19762826 | 356..17 | 1700 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:46:44 has no hits.
BS06966.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:10:42 Download gff for
BS06966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RB | 28..1032 | 17..1021 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:50:19 Download gff for
BS06966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RB | 143..1152 | 17..1027 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:26 Download gff for
BS06966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RA | 73..1076 | 17..1020 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:10:43 Download gff for
BS06966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RB | 143..1152 | 17..1027 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:04 Download gff for
BS06966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbp-RA | 73..1076 | 17..1020 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:04 Download gff for
BS06966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19761641..19762305 | 356..1020 | 100 | <- | Minus |
2L | 19762488..19762826 | 17..355 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:26 Download gff for
BS06966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19762488..19762826 | 17..355 | 100 | | Minus |
arm_2L | 19761641..19762305 | 356..1020 | 100 | <- | Minus |
BS06966.pep Sequence
Translation from 16 to 1020
> BS06966.pep
MTQQRPAFDSNAMTLTRFVLQEQRKFKSATGDLSQLLNSIQTAIKATSSA
VRKAGIAKLHGFAGDVNVQGEEVKKLDVLSNELFINMLKSSYTTCLMVSE
ENENVIEVEVEKQGKYIVCFDPLDGSSNIDCLVSIGSIFAIYRKKSDGPP
TVEDALQPGNQLVAAGYALYGSATAIVLGLGSGVNGFTYDPAIGEFVLTD
PNMRVPEKGKIYSINEGYAADWEDGVFNYIAAKKDPAKGKPYGARYVGSM
VADVHRTIKYGGIFIYPATKSAPSGKLRLLYECVPMAYLMIQAGGLASDG
KISILDIVPKKIHERSPIFLGSKSDVEEALSYLK*
BS06966.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbp-PE | 334 | CG31692-PE | 1..334 | 1..334 | 1702 | 100 | Plus |
fbp-PA | 334 | CG31692-PA | 1..334 | 1..334 | 1702 | 100 | Plus |
fbp-PD | 322 | CG31692-PD | 1..322 | 13..334 | 1640 | 100 | Plus |
fbp-PC | 322 | CG31692-PC | 1..322 | 13..334 | 1640 | 100 | Plus |