Clone Sequence Records
BS07032.3prime Sequence
907 bp (810 high quality bases) assembled on 2006-01-06
> BS07032.3prime
ATGGTCTAGAAAGCTTTTAGAGAAGTCGATACTTGATGGCGCGCAGCATG
GGGAAGCGATCGTTTGTGCACTGACCACGGAAATCGTCTTGGGTCAGATC
AAACAGAGCCACTCCACCGAGATTCCTTGCCCTGGCGTACATAGCCTTGC
TGGAGGCAGAGTCCGGATCATCGTAGCTGATCCACAGTCCATGGTCACCA
TTTTCATCGGCGGCACGGAAGGCGTAGCTGCCATAACGTTTGGTGGGATC
CACAACCCTTTTCACCGGAGCATTAGGACCTCGGGCATTGGAGTTACTGG
GGTTGGGCATCAGTGAGCAGATCTCAGCCCAGTTGAGCAGACCCTCCTGT
TTGCTCTGAGGTCCAGCTGGAGCAGGTCCCTGGGTGGAGGGAACCACTGG
CATACCAGAGTCTCCCGAATCCTTGCTCATCTTCCACGACCTGCCATAGG
TGGCAATGCCAATGTTTATCTTATTAGCCGGCACTCTCTGAAGCAACCAG
TGTTCCATTTGGAAGTTTAGATTGTAGTGGCCCAAACGATTTTGTCCAAC
TGCCTCATATGTTGGCGCCGAGAAGTCCGCCTCCTCGGGATTGCGCTGCG
GGGTCAGGAAGTCAAAAGTTCCCAGGTTGATAAAGTCCAGGCTTGGGGCG
ATCGACGGGGCATCATAGTACCAGCTGGAGTTCACATTTGGCAAAACGGT
GAGACTGAGCAGCAGATCATTTTGTTTCAGAGCGGCACTCAAATCCTTGA
TCAGTGCAGTCACCTGTCCTTTGTGCGTTTCCGATTCAGTATCCACAATA
AAGTCGCCGGTGAAGAACTTCTTGAAACTCTTCCACGCAGAGCCCACATC
CCCATGAACTTTGCGTGGCTTATTTCTGGGAAGCTGGAGAGCCAGGTCCA
GAACATC
BS07032.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:38:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4559-PC | 1326 | Idgf3-RC | 441..1326 | 902..17 | 4430 | 100 | Minus |
CG4559-PB | 1326 | Idgf3-RB | 441..1326 | 902..17 | 4430 | 100 | Minus |
CG4559-PA | 1326 | Idgf3-RA | 441..1326 | 902..17 | 4430 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:04:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Idgf3-RD | 3801 | CG4559-RD | 566..1456 | 907..17 | 4440 | 99.9 | Minus |
Idgf3-RA | 1649 | CG4559-RA | 566..1456 | 907..17 | 4440 | 99.9 | Minus |
Idgf3-RB | 3145 | CG4559-RB | 566..1456 | 907..17 | 4440 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:04:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16452194..16452849 | 672..17 | 3280 | 100 | Minus |
2L | 23513712 | 2L | 16451693..16451928 | 907..672 | 1165 | 99.6 | Minus |
2L | 23513712 | 2L | 16450300..16450451 | 178..27 | 220 | 76.3 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:04:39 has no hits.
BS07032.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:59:47 Download gff for
BS07032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-PC | 436..1326 | 17..907 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:45:17 Download gff for
BS07032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4559-PA | 436..1326 | 17..907 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:00:14 Download gff for
BS07032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-RB | 566..1458 | 13..907 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:07:51 Download gff for
BS07032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-RB | 566..1458 | 13..907 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:07:51 Download gff for
BS07032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16451693..16451927 | 673..907 | 99 | -> | Minus |
2L | 16452194..16452851 | 13..672 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:00:14 Download gff for
BS07032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16451693..16451927 | 673..907 | 99 | -> | Minus |
arm_2L | 16452194..16452851 | 13..672 | 99 | | Minus |
BS07032.5prime Sequence
884 bp (728 high quality bases) assembled on 2006-01-06
> BS07032.5prime
GAAGTTATCAGTCGACATGACTGGCTCTCTTTGGCTCAGTTTGGCACTGA
GTCTAGCGGTTTTGGCTCAATTTAAAGTGAGCGCCGCTCCTAATCTGGTT
TGTTTCTATGACTCGCAGGGCTCTCAGCGTCAGGGCCTGGCTCAGTTTTC
GATGATCGACATCGAGCTAGCCCTACAATTCTGCACCCATTTGGTCTACG
GCTATGCGGGTGTTAATGCCGATAACTATGAAATGCAGAGCATTAACAAG
CGATTGGACCTTGAGCAGCGTCATCTGGCCCAGATCACTAGTATGAAGGA
ACGCTATCCCCACATCAAGTTCCTATTGAGCGTTGGTGGCGATGCCGATA
CCTATGAGGGTAATCAGTATATAAAGCTCCTGGAATCGGGACAACAGGGC
CACAGACGCTTCATCGAATCTGCTCGAGATTTGGTGAGACGTTATAATTT
CGATGGTCTGGACCTGGCTCTCCAGCTTCCCAGAAATAAGCCACGCAAAG
TTCATGGGGATGTGGGCTCTGCGTGGAAGAGTTTCAAGAAGTTCTTCACC
GGCGACTTTATTGTGGATACTGAATCGGAAACGCACAAAGGACAGGTGAC
TGCACTGATCAAGGATTTGAGTGCCGCTCTGAAACAAAATGATCTGCTGC
TCAGTCTCACCGTTTTGCCAAATGTGAACTCCAGCTGGTACTATGATGCC
CCGTCGATCGCCCCAAGCCTGGACTTTATCAACCTGGGAACTTTTGACTT
CCTGACCCCGCAGCGCAATCCCGAGGAGGCGGACTTCTCGGCGCCAACAT
ATGAGGCAGTTGGACAAAATCGTTTGGGCCACTACAATCTAAACTTCCAA
ATGGAACACTGGTTGCTTCAGAGAGTGCCGGCTA
BS07032.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:38:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4559-PC | 1326 | Idgf3-RC | 1..868 | 17..884 | 4340 | 100 | Plus |
CG4559-PB | 1326 | Idgf3-RB | 1..868 | 17..884 | 4340 | 100 | Plus |
CG4559-PA | 1326 | Idgf3-RA | 1..868 | 17..884 | 4340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 04:45:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Idgf3-RD | 3801 | CG4559-RD | 131..998 | 17..884 | 4340 | 100 | Plus |
Idgf3-RA | 1649 | CG4559-RA | 131..998 | 17..884 | 4340 | 100 | Plus |
Idgf3-RB | 3145 | CG4559-RB | 131..998 | 17..884 | 4340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 04:44:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16451375..16451928 | 134..687 | 2770 | 100 | Plus |
2L | 23513712 | 2L | 16452194..16452391 | 687..884 | 990 | 100 | Plus |
2L | 23513712 | 2L | 16451190..16451308 | 17..135 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 04:45:01 has no hits.
BS07032.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:59:48 Download gff for
BS07032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-PC | 1..867 | 17..883 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:45:18 Download gff for
BS07032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4559-PA | 1..867 | 17..883 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:49:36 Download gff for
BS07032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-RB | 131..997 | 17..883 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:25:29 Download gff for
BS07032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-RB | 131..997 | 17..883 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:25:29 Download gff for
BS07032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16451190..16451307 | 17..134 | 100 | -> | Plus |
2L | 16451376..16451927 | 135..686 | 100 | -> | Plus |
2L | 16452194..16452390 | 687..883 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:49:36 Download gff for
BS07032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16451190..16451307 | 17..134 | 100 | -> | Plus |
arm_2L | 16451376..16451927 | 135..686 | 100 | -> | Plus |
arm_2L | 16452194..16452390 | 687..883 | 100 | | Plus |
BS07032.complete Sequence
1358 bp (1358 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635699
> BS07032.complete
GAAGTTATCAGTCGACATGACTGGCTCTCTTTGGCTCAGTTTGGCACTGA
GTCTAGCGGTTTTGGCTCAATTTAAAGTGAGCGCCGCTCCTAATCTGGTT
TGTTTCTATGACTCGCAGGGCTCTCAGCGTCAGGGCCTGGCTCAGTTTTC
GATGATCGACATCGAGCTAGCCCTACAATTCTGCACCCATTTGGTCTACG
GCTATGCGGGTGTTAATGCCGATAACTATGAAATGCAGAGCATTAACAAG
CGATTGGACCTTGAGCAGCGTCATCTGGCCCAGATCACTAGTATGAAGGA
ACGCTATCCCCACATCAAGTTCCTATTGAGCGTTGGTGGCGATGCCGATA
CCTATGAGGGTAATCAGTATATAAAGCTCCTGGAATCGGGACAACAGGGC
CACAGACGCTTCATCGAATCTGCTCGAGATTTGGTGAGACGTTATAATTT
CGATGGTCTGGACCTGGCTCTCCAGCTTCCCAGAAATAAGCCACGCAAAG
TTCATGGGGATGTGGGCTCTGCGTGGAAGAGTTTCAAGAAGTTCTTCACC
GGCGACTTTATTGTGGATACTGAATCGGAAACGCACAAAGGACAGGTGAC
TGCACTGATCAAGGATTTGAGTGCCGCTCTGAAACAAAATGATCTGCTGC
TCAGTCTCACCGTTTTGCCAAATGTGAACTCCAGCTGGTACTATGATGCC
CCGTCGATCGCCCCAAGCCTGGACTTTATCAACCTGGGAACTTTTGACTT
CCTGACCCCGCAGCGCAATCCCGAGGAGGCGGACTTCTCGGCGCCAACAT
ATGAGGCAGTTGGACAAAATCGTTTGGGCCACTACAATCTAAACTTCCAA
ATGGAACACTGGTTGCTTCAGAGAGTGCCGGCTAATAAGATAAACATTGG
CATTGCCACCTATGGCAGGTCGTGGAAGATGAGCAAGGATTCGGGAGACT
CTGGTATGCCAGTGGTTCCCTCCACCCAGGGACCTGCTCCAGCTGGACCT
CAGAGCAAACAGGAGGGTCTGCTCAACTGGGCTGAGATCTGCTCACTGAT
GCCCAACCCCAGTAACTCCAATGCCCGAGGTCCTAATGCTCCGGTGAAAA
GGGTTGTGGATCCCACCAAACGTTATGGCAGCTACGCCTTCCGTGCCGCC
GATGAAAATGGTGACCATGGACTGTGGATCAGCTACGATGATCCGGACTC
TGCCTCCAGCAAGGCTATGTACGCCAGGGCAAGGAATCTCGGTGGAGTGG
CTCTGTTTGATCTGACCCAAGACGATTTCCGTGGTCAGTGCACAAACGAT
CGCTTCCCCATGCTGCGCGCCATCAAGTATCGACTTCTCTAAAAGCTTTC
TAGACCAT
BS07032.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:02:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Idgf3-RD | 1326 | CG4559-PD | 1..1326 | 17..1342 | 6630 | 100 | Plus |
Idgf3-RA | 1326 | CG4559-PA | 1..1326 | 17..1342 | 6630 | 100 | Plus |
Idgf3-RB | 1326 | CG4559-PB | 1..1326 | 17..1342 | 6630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:02:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Idgf3-RD | 3801 | CG4559-RD | 131..1456 | 17..1342 | 6630 | 100 | Plus |
Idgf3-RA | 1649 | CG4559-RA | 131..1456 | 17..1342 | 6630 | 100 | Plus |
Idgf3-RB | 3145 | CG4559-RB | 131..1456 | 17..1342 | 6630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:02:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16452194..16452849 | 687..1342 | 3280 | 100 | Plus |
2L | 23513712 | 2L | 16451375..16451928 | 134..687 | 2770 | 100 | Plus |
2L | 23513712 | 2L | 16451190..16451308 | 17..135 | 595 | 100 | Plus |
2L | 23513712 | 2L | 16450300..16450451 | 1181..1332 | 220 | 76.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:02:20 has no hits.
BS07032.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:10:12 Download gff for
BS07032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-RA | 1..1326 | 17..1342 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:49:47 Download gff for
BS07032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-RA | 120..1447 | 17..1346 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:16:32 Download gff for
BS07032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-RB | 131..1454 | 17..1340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:10:12 Download gff for
BS07032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-RA | 120..1447 | 17..1346 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:06 Download gff for
BS07032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Idgf3-RB | 131..1454 | 17..1340 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:06 Download gff for
BS07032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16451190..16451307 | 17..134 | 100 | -> | Plus |
2L | 16451376..16451927 | 135..686 | 100 | -> | Plus |
2L | 16452194..16452847 | 687..1340 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:16:32 Download gff for
BS07032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16451190..16451307 | 17..134 | 100 | -> | Plus |
arm_2L | 16451376..16451927 | 135..686 | 100 | -> | Plus |
arm_2L | 16452194..16452847 | 687..1340 | 100 | | Plus |
BS07032.pep Sequence
Translation from 16 to 1341
> BS07032.pep
MTGSLWLSLALSLAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDIE
LALQFCTHLVYGYAGVNADNYEMQSINKRLDLEQRHLAQITSMKERYPHI
KFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIESARDLVRRYNFDGLDL
ALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKD
LSAALKQNDLLLSLTVLPNVNSSWYYDAPSIAPSLDFINLGTFDFLTPQR
NPEEADFSAPTYEAVGQNRLGHYNLNFQMEHWLLQRVPANKINIGIATYG
RSWKMSKDSGDSGMPVVPSTQGPAPAGPQSKQEGLLNWAEICSLMPNPSN
SNARGPNAPVKRVVDPTKRYGSYAFRAADENGDHGLWISYDDPDSASSKA
MYARARNLGGVALFDLTQDDFRGQCTNDRFPMLRAIKYRLL*
BS07032.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:23:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Idgf3-PD | 441 | CG4559-PD | 1..441 | 1..441 | 2319 | 100 | Plus |
Idgf3-PA | 441 | CG4559-PA | 1..441 | 1..441 | 2319 | 100 | Plus |
Idgf3-PB | 441 | CG4559-PB | 1..441 | 1..441 | 2319 | 100 | Plus |
Idgf3-PC | 441 | CG4559-PC | 1..441 | 1..441 | 2319 | 100 | Plus |
Idgf2-PA | 440 | CG4475-PA | 1..440 | 1..440 | 1338 | 56.4 | Plus |