Clone BS07032 Report

Search the DGRC for BS07032

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:70
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptIdgf3-RA
Protein status:BS07032.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07032.3prime Sequence

907 bp (810 high quality bases) assembled on 2006-01-06

> BS07032.3prime
ATGGTCTAGAAAGCTTTTAGAGAAGTCGATACTTGATGGCGCGCAGCATG
GGGAAGCGATCGTTTGTGCACTGACCACGGAAATCGTCTTGGGTCAGATC
AAACAGAGCCACTCCACCGAGATTCCTTGCCCTGGCGTACATAGCCTTGC
TGGAGGCAGAGTCCGGATCATCGTAGCTGATCCACAGTCCATGGTCACCA
TTTTCATCGGCGGCACGGAAGGCGTAGCTGCCATAACGTTTGGTGGGATC
CACAACCCTTTTCACCGGAGCATTAGGACCTCGGGCATTGGAGTTACTGG
GGTTGGGCATCAGTGAGCAGATCTCAGCCCAGTTGAGCAGACCCTCCTGT
TTGCTCTGAGGTCCAGCTGGAGCAGGTCCCTGGGTGGAGGGAACCACTGG
CATACCAGAGTCTCCCGAATCCTTGCTCATCTTCCACGACCTGCCATAGG
TGGCAATGCCAATGTTTATCTTATTAGCCGGCACTCTCTGAAGCAACCAG
TGTTCCATTTGGAAGTTTAGATTGTAGTGGCCCAAACGATTTTGTCCAAC
TGCCTCATATGTTGGCGCCGAGAAGTCCGCCTCCTCGGGATTGCGCTGCG
GGGTCAGGAAGTCAAAAGTTCCCAGGTTGATAAAGTCCAGGCTTGGGGCG
ATCGACGGGGCATCATAGTACCAGCTGGAGTTCACATTTGGCAAAACGGT
GAGACTGAGCAGCAGATCATTTTGTTTCAGAGCGGCACTCAAATCCTTGA
TCAGTGCAGTCACCTGTCCTTTGTGCGTTTCCGATTCAGTATCCACAATA
AAGTCGCCGGTGAAGAACTTCTTGAAACTCTTCCACGCAGAGCCCACATC
CCCATGAACTTTGCGTGGCTTATTTCTGGGAAGCTGGAGAGCCAGGTCCA
GAACATC

BS07032.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:38:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG4559-PC 1326 Idgf3-RC 441..1326 902..17 4430 100 Minus
CG4559-PB 1326 Idgf3-RB 441..1326 902..17 4430 100 Minus
CG4559-PA 1326 Idgf3-RA 441..1326 902..17 4430 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:04:40
Subject Length Description Subject Range Query Range Score Percent Strand
Idgf3-RD 3801 CG4559-RD 566..1456 907..17 4440 99.9 Minus
Idgf3-RA 1649 CG4559-RA 566..1456 907..17 4440 99.9 Minus
Idgf3-RB 3145 CG4559-RB 566..1456 907..17 4440 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:04:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16452194..16452849 672..17 3280 100 Minus
2L 23513712 2L 16451693..16451928 907..672 1165 99.6 Minus
2L 23513712 2L 16450300..16450451 178..27 220 76.3 Minus
Blast to na_te.dros performed on 2015-02-12 04:04:39 has no hits.

BS07032.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:59:47 Download gff for BS07032.3prime
Subject Subject Range Query Range Percent Splice Strand
Idgf3-PC 436..1326 17..907 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:45:17 Download gff for BS07032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4559-PA 436..1326 17..907 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:00:14 Download gff for BS07032.3prime
Subject Subject Range Query Range Percent Splice Strand
Idgf3-RB 566..1458 13..907 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:07:51 Download gff for BS07032.3prime
Subject Subject Range Query Range Percent Splice Strand
Idgf3-RB 566..1458 13..907 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:07:51 Download gff for BS07032.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16451693..16451927 673..907 99 -> Minus
2L 16452194..16452851 13..672 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:00:14 Download gff for BS07032.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16451693..16451927 673..907 99 -> Minus
arm_2L 16452194..16452851 13..672 99   Minus

BS07032.5prime Sequence

884 bp (728 high quality bases) assembled on 2006-01-06

> BS07032.5prime
GAAGTTATCAGTCGACATGACTGGCTCTCTTTGGCTCAGTTTGGCACTGA
GTCTAGCGGTTTTGGCTCAATTTAAAGTGAGCGCCGCTCCTAATCTGGTT
TGTTTCTATGACTCGCAGGGCTCTCAGCGTCAGGGCCTGGCTCAGTTTTC
GATGATCGACATCGAGCTAGCCCTACAATTCTGCACCCATTTGGTCTACG
GCTATGCGGGTGTTAATGCCGATAACTATGAAATGCAGAGCATTAACAAG
CGATTGGACCTTGAGCAGCGTCATCTGGCCCAGATCACTAGTATGAAGGA
ACGCTATCCCCACATCAAGTTCCTATTGAGCGTTGGTGGCGATGCCGATA
CCTATGAGGGTAATCAGTATATAAAGCTCCTGGAATCGGGACAACAGGGC
CACAGACGCTTCATCGAATCTGCTCGAGATTTGGTGAGACGTTATAATTT
CGATGGTCTGGACCTGGCTCTCCAGCTTCCCAGAAATAAGCCACGCAAAG
TTCATGGGGATGTGGGCTCTGCGTGGAAGAGTTTCAAGAAGTTCTTCACC
GGCGACTTTATTGTGGATACTGAATCGGAAACGCACAAAGGACAGGTGAC
TGCACTGATCAAGGATTTGAGTGCCGCTCTGAAACAAAATGATCTGCTGC
TCAGTCTCACCGTTTTGCCAAATGTGAACTCCAGCTGGTACTATGATGCC
CCGTCGATCGCCCCAAGCCTGGACTTTATCAACCTGGGAACTTTTGACTT
CCTGACCCCGCAGCGCAATCCCGAGGAGGCGGACTTCTCGGCGCCAACAT
ATGAGGCAGTTGGACAAAATCGTTTGGGCCACTACAATCTAAACTTCCAA
ATGGAACACTGGTTGCTTCAGAGAGTGCCGGCTA

BS07032.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:38:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG4559-PC 1326 Idgf3-RC 1..868 17..884 4340 100 Plus
CG4559-PB 1326 Idgf3-RB 1..868 17..884 4340 100 Plus
CG4559-PA 1326 Idgf3-RA 1..868 17..884 4340 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 04:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
Idgf3-RD 3801 CG4559-RD 131..998 17..884 4340 100 Plus
Idgf3-RA 1649 CG4559-RA 131..998 17..884 4340 100 Plus
Idgf3-RB 3145 CG4559-RB 131..998 17..884 4340 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 04:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16451375..16451928 134..687 2770 100 Plus
2L 23513712 2L 16452194..16452391 687..884 990 100 Plus
2L 23513712 2L 16451190..16451308 17..135 595 100 Plus
Blast to na_te.dros performed on 2015-02-10 04:45:01 has no hits.

BS07032.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:59:48 Download gff for BS07032.5prime
Subject Subject Range Query Range Percent Splice Strand
Idgf3-PC 1..867 17..883 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:45:18 Download gff for BS07032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4559-PA 1..867 17..883 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:49:36 Download gff for BS07032.5prime
Subject Subject Range Query Range Percent Splice Strand
Idgf3-RB 131..997 17..883 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:25:29 Download gff for BS07032.5prime
Subject Subject Range Query Range Percent Splice Strand
Idgf3-RB 131..997 17..883 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:25:29 Download gff for BS07032.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16451190..16451307 17..134 100 -> Plus
2L 16451376..16451927 135..686 100 -> Plus
2L 16452194..16452390 687..883 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:49:36 Download gff for BS07032.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16451190..16451307 17..134 100 -> Plus
arm_2L 16451376..16451927 135..686 100 -> Plus
arm_2L 16452194..16452390 687..883 100   Plus

BS07032.complete Sequence

1358 bp (1358 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635699

> BS07032.complete
GAAGTTATCAGTCGACATGACTGGCTCTCTTTGGCTCAGTTTGGCACTGA
GTCTAGCGGTTTTGGCTCAATTTAAAGTGAGCGCCGCTCCTAATCTGGTT
TGTTTCTATGACTCGCAGGGCTCTCAGCGTCAGGGCCTGGCTCAGTTTTC
GATGATCGACATCGAGCTAGCCCTACAATTCTGCACCCATTTGGTCTACG
GCTATGCGGGTGTTAATGCCGATAACTATGAAATGCAGAGCATTAACAAG
CGATTGGACCTTGAGCAGCGTCATCTGGCCCAGATCACTAGTATGAAGGA
ACGCTATCCCCACATCAAGTTCCTATTGAGCGTTGGTGGCGATGCCGATA
CCTATGAGGGTAATCAGTATATAAAGCTCCTGGAATCGGGACAACAGGGC
CACAGACGCTTCATCGAATCTGCTCGAGATTTGGTGAGACGTTATAATTT
CGATGGTCTGGACCTGGCTCTCCAGCTTCCCAGAAATAAGCCACGCAAAG
TTCATGGGGATGTGGGCTCTGCGTGGAAGAGTTTCAAGAAGTTCTTCACC
GGCGACTTTATTGTGGATACTGAATCGGAAACGCACAAAGGACAGGTGAC
TGCACTGATCAAGGATTTGAGTGCCGCTCTGAAACAAAATGATCTGCTGC
TCAGTCTCACCGTTTTGCCAAATGTGAACTCCAGCTGGTACTATGATGCC
CCGTCGATCGCCCCAAGCCTGGACTTTATCAACCTGGGAACTTTTGACTT
CCTGACCCCGCAGCGCAATCCCGAGGAGGCGGACTTCTCGGCGCCAACAT
ATGAGGCAGTTGGACAAAATCGTTTGGGCCACTACAATCTAAACTTCCAA
ATGGAACACTGGTTGCTTCAGAGAGTGCCGGCTAATAAGATAAACATTGG
CATTGCCACCTATGGCAGGTCGTGGAAGATGAGCAAGGATTCGGGAGACT
CTGGTATGCCAGTGGTTCCCTCCACCCAGGGACCTGCTCCAGCTGGACCT
CAGAGCAAACAGGAGGGTCTGCTCAACTGGGCTGAGATCTGCTCACTGAT
GCCCAACCCCAGTAACTCCAATGCCCGAGGTCCTAATGCTCCGGTGAAAA
GGGTTGTGGATCCCACCAAACGTTATGGCAGCTACGCCTTCCGTGCCGCC
GATGAAAATGGTGACCATGGACTGTGGATCAGCTACGATGATCCGGACTC
TGCCTCCAGCAAGGCTATGTACGCCAGGGCAAGGAATCTCGGTGGAGTGG
CTCTGTTTGATCTGACCCAAGACGATTTCCGTGGTCAGTGCACAAACGAT
CGCTTCCCCATGCTGCGCGCCATCAAGTATCGACTTCTCTAAAAGCTTTC
TAGACCAT

BS07032.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:02:21
Subject Length Description Subject Range Query Range Score Percent Strand
Idgf3-RD 1326 CG4559-PD 1..1326 17..1342 6630 100 Plus
Idgf3-RA 1326 CG4559-PA 1..1326 17..1342 6630 100 Plus
Idgf3-RB 1326 CG4559-PB 1..1326 17..1342 6630 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
Idgf3-RD 3801 CG4559-RD 131..1456 17..1342 6630 100 Plus
Idgf3-RA 1649 CG4559-RA 131..1456 17..1342 6630 100 Plus
Idgf3-RB 3145 CG4559-RB 131..1456 17..1342 6630 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:02:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16452194..16452849 687..1342 3280 100 Plus
2L 23513712 2L 16451375..16451928 134..687 2770 100 Plus
2L 23513712 2L 16451190..16451308 17..135 595 100 Plus
2L 23513712 2L 16450300..16450451 1181..1332 220 76.3 Plus
Blast to na_te.dros performed on 2014-11-28 00:02:20 has no hits.

BS07032.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:10:12 Download gff for BS07032.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf3-RA 1..1326 17..1342 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:49:47 Download gff for BS07032.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf3-RA 120..1447 17..1346 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:16:32 Download gff for BS07032.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf3-RB 131..1454 17..1340 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:10:12 Download gff for BS07032.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf3-RA 120..1447 17..1346 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:06 Download gff for BS07032.complete
Subject Subject Range Query Range Percent Splice Strand
Idgf3-RB 131..1454 17..1340 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:06 Download gff for BS07032.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16451190..16451307 17..134 100 -> Plus
2L 16451376..16451927 135..686 100 -> Plus
2L 16452194..16452847 687..1340 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:16:32 Download gff for BS07032.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16451190..16451307 17..134 100 -> Plus
arm_2L 16451376..16451927 135..686 100 -> Plus
arm_2L 16452194..16452847 687..1340 100   Plus

BS07032.pep Sequence

Translation from 16 to 1341

> BS07032.pep
MTGSLWLSLALSLAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDIE
LALQFCTHLVYGYAGVNADNYEMQSINKRLDLEQRHLAQITSMKERYPHI
KFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIESARDLVRRYNFDGLDL
ALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKD
LSAALKQNDLLLSLTVLPNVNSSWYYDAPSIAPSLDFINLGTFDFLTPQR
NPEEADFSAPTYEAVGQNRLGHYNLNFQMEHWLLQRVPANKINIGIATYG
RSWKMSKDSGDSGMPVVPSTQGPAPAGPQSKQEGLLNWAEICSLMPNPSN
SNARGPNAPVKRVVDPTKRYGSYAFRAADENGDHGLWISYDDPDSASSKA
MYARARNLGGVALFDLTQDDFRGQCTNDRFPMLRAIKYRLL*

BS07032.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:23:10
Subject Length Description Subject Range Query Range Score Percent Strand
Idgf3-PD 441 CG4559-PD 1..441 1..441 2319 100 Plus
Idgf3-PA 441 CG4559-PA 1..441 1..441 2319 100 Plus
Idgf3-PB 441 CG4559-PB 1..441 1..441 2319 100 Plus
Idgf3-PC 441 CG4559-PC 1..441 1..441 2319 100 Plus
Idgf2-PA 440 CG4475-PA 1..440 1..440 1338 56.4 Plus